Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_05637 and BL03991
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:27:45
# Commandline: needle
# -asequence dna-align/BSNT_05637___glyA.1.5803.seq
# -bsequence dna-align/BL03991___glyA.2.5803.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_05637___glyA-BL03991___glyA.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_05637___glyA-BL03991___glyA.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_05637___glyA
# 2: BL03991___glyA
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 1253
# Identity: 1021/1253 (81.5%)
# Similarity: 1021/1253 (81.5%)
# Gaps: 10/1253 ( 0.8%)
# Score: 4136.0
#
#
#=======================================
BSNT_05637___ 1 ATGAAACATTTACCTGCGCAAGACGAACAAGTGTTTAACGCCATTAAAAA 50
|||||||||||||||||||||||.||||||||.||||.|||||||.||.|
BL03991___gly 1 ATGAAACATTTACCTGCGCAAGATGAACAAGTTTTTAGCGCCATTCAAGA 50
BSNT_05637___ 51 TGAGCGTGAACGCCAACAGACTAAGATCGAATTGATTGCTTCTGAGAACT 100
||||||..||||.||||||.|.|||||.||..||||.||||||||.||||
BL03991___gly 51 TGAGCGGAAACGTCAACAGTCGAAGATTGAGCTGATCGCTTCTGAAAACT 100
BSNT_05637___ 101 TTGTAAGTGAAGCGGTTATGGAAGCACAAGGATCTGTTTTGACAAATAAG 150
|||||||.|||||||||||||||||.|||||.||.|||||.||.|||||.
BL03991___gly 101 TTGTAAGCGAAGCGGTTATGGAAGCTCAAGGCTCGGTTTTAACTAATAAA 150
BSNT_05637___ 151 TACGCAGAAGGATATCCGGGCAAACGCTACTACGGCGGATGCGAGCACGT 200
||.||.|||||||||||.||.|||||||||||||||||.||.|||||.||
BL03991___gly 151 TATGCGGAAGGATATCCTGGTAAACGCTACTACGGCGGTTGTGAGCATGT 200
BSNT_05637___ 201 CGATGTCGTTGAAGATATCGCCCGTGACCGCGCGAAGGAAATCTTTGGAG 250
.||.||.|..||.||||||||.||.||||||||.|||.|.||.||.||.|
BL03991___gly 201 AGACGTGGCAGAGGATATCGCGCGCGACCGCGCCAAGCAGATTTTCGGCG 250
BSNT_05637___ 251 CGGAGCATGTAAACGTTCAGCCTCATTCAGGCGCGCAAGCAAACATGGCA 300
|.|||||.||.|||||||||||.|||||.|||||.|||||.||||||||.
BL03991___gly 251 CCGAGCACGTCAACGTTCAGCCGCATTCCGGCGCACAAGCGAACATGGCG 300
BSNT_05637___ 301 GTGTACTTCACGATTTTGGAGCAAGGCGATACTGTACTTGGG-ATGAACC 349
||.||||||||||||||||||||.||.||.||||| .||||| |||||||
BL03991___gly 301 GTATACTTCACGATTTTGGAGCACGGTGACACTGT-GTTGGGAATGAACC 349
BSNT_05637___ 350 TCTCCCACGGCGGCCATTTAACACACGGAAGCCCAGTCAACTTCAGCGGT 399
|..|.||||||||.||||||||.|||||.|||||.|||||||||||||||
BL03991___gly 350 TTGCTCACGGCGGACATTTAACGCACGGCAGCCCTGTCAACTTCAGCGGT 399
BSNT_05637___ 400 GTTCAATATAACTTTGTTGAGTACGGCGTAGATAAAGAAACTCAATATAT 449
|||||.||.|||||.|||||.||||||||.||||||||.||.||.|||||
BL03991___gly 400 GTTCAGTACAACTTCGTTGAATACGGCGTTGATAAAGAGACGCAGTATAT 449
BSNT_05637___ 450 TGATTACGATGACGTGCGTGAAAAAGCCCTCGCTCATAAACCGAAGCTTA 499
|||||||||.||.||.||||||||.||.|||...|||||.||.|||||.|
BL03991___gly 450 TGATTACGAAGATGTCCGTGAAAAGGCGCTCAAACATAAGCCTAAGCTGA 499
BSNT_05637___ 500 TCGTAGCAGGAGCAAGTGCGTATCCTCGTACAATCGACTTTAAGAAATTC 549
||||.||.||||||||.||.|||||.||.||.|||||.|||||.||.|||
BL03991___gly 500 TCGTGGCCGGAGCAAGCGCATATCCGCGCACCATCGATTTTAAAAAGTTC 549
BSNT_05637___ 550 CGTGAAATTGCTGATGAAGTCGGCGCTTACTTCATGGTGGATATGGCACA 599
||.|||||.||||||||||||||.||.||..|.||||||||.|||||.||
BL03991___gly 550 CGCGAAATCGCTGATGAAGTCGGAGCCTATGTGATGGTGGACATGGCGCA 599
BSNT_05637___ 600 TATCGCAGGACTTGTTGCGGCAGGCCTTCATCCAAACCCGGTTCCTTACG 649
||||||.||||||||.||.|||||.|||||.||.||.||.||||||||||
BL03991___gly 600 TATCGCCGGACTTGTAGCAGCAGGTCTTCACCCGAATCCTGTTCCTTACG 649
BSNT_05637___ 650 CTGATTTCGTTACAACAACAACACATAAAACACTTCGCGGTCCTCGCGGC 699
||||.||.||.||.||.|||||.||||||||.||||||||.||.||||||
BL03991___gly 650 CTGACTTTGTGACGACGACAACTCATAAAACGCTTCGCGGACCGCGCGGC 699
BSNT_05637___ 700 GGTATGATCCTTTGCCGTGAAGAGTTTGGCAAGAAAATTGATAAATCGAT 749
||.|||||.|||||||||||||||||||..||..|||||||.||.|||||
BL03991___gly 700 GGCATGATTCTTTGCCGTGAAGAGTTTGCGAAACAAATTGACAAGTCGAT 749
BSNT_05637___ 750 CTTCCCTGGAATTCAAGGCGGCCCGCTGATGCACGTTATTGCCGCAAAAG 799
|||||||||||||||||||||.|||.|.||||||||.||.||.|||||.|
BL03991___gly 750 CTTCCCTGGAATTCAAGGCGGACCGTTAATGCACGTGATCGCTGCAAAGG 799
BSNT_05637___ 800 CTGTTTCATTCGGTGAAGTATTGCAGGACGATTTCAAAACATATGCACAA 849
|||||||.||.||.||||..||..|||||||.||||||||||||||.|||
BL03991___gly 800 CTGTTTCCTTTGGCGAAGCTTTAAAGGACGAATTCAAAACATATGCCCAA 849
BSNT_05637___ 850 AACGTCATTTCA--AACGCGAAACGTCTGGCTGAAGCCTTAACGAAAGAG 897
||.|||| ||| ||.|||||.||..||||||||.|.||.|..||||||
BL03991___gly 850 AATGTCA--TCAACAATGCGAAGCGCTTGGCTGAAACATTGAAAAAAGAG 897
BSNT_05637___ 898 GGCATCCAGCTCGTTTCAGGCGGAACAGACAACCACCTTATCCTTGTTGA 947
||.|||.|||||||.||.||||||||.||.|||||.|||.|.||.||.||
BL03991___gly 898 GGTATCGAGCTCGTATCCGGCGGAACGGATAACCATCTTGTGCTGGTCGA 947
BSNT_05637___ 948 CCTTCGTTCGCTCGGACTGACTGGTAAGGTTGCGGAGCATGTACTTGATG 997
|||.||.||.|||||..|.||.||.||.||.||.||..||||||||||||
BL03991___gly 948 CCTGCGCTCTCTCGGCATTACCGGAAAAGTGGCTGAAAATGTACTTGATG 997
BSNT_05637___ 998 AAATCGGTATTA-CGTCTAACAAAAACGCGATTCCATATGATCCTGAAAA 1046
||.||||.||.| |||| |||||||||||||||||.||||||||||||||
BL03991___gly 998 AAGTCGGCATCACCGTC-AACAAAAACGCGATTCCTTATGATCCTGAAAA 1046
BSNT_05637___ 1047 ACCTTTCGTAACAAGCGGCATCCGTCTTGGTACAGCTGCTGTAACCAGCC 1096
|||||||||.||.|||||.|||||..|.||||||||.|||||.||.||||
BL03991___gly 1047 ACCTTTCGTTACGAGCGGAATCCGCGTCGGTACAGCAGCTGTGACGAGCC 1096
BSNT_05637___ 1097 GCGGTTTTGA-CGGAGACGCATTAGAAGAAGTCGGTGCTATCATTGCGCT 1145
||||.||||| |.| ||.||..|.||||||||.||.||.|||||||||||
BL03991___gly 1097 GCGGCTTTGATCTG-GAAGCGATCGAAGAAGTGGGAGCGATCATTGCGCT 1145
BSNT_05637___ 1146 TGCATTGAAAAACCACGAAGACGAAGGAAAACTTGAAGAAGCAAGACAGC 1195
|||..|.||||||||.||||||||||..||||||||||||||||.|||||
BL03991___gly 1146 TGCCCTTAAAAACCATGAAGACGAAGCGAAACTTGAAGAAGCAAAACAGC 1195
BSNT_05637___ 1196 GTGTAGCTGCTCTGACTGATAAATTTCCTTTATATAAAGAATTAGATTAT 1245
||||||..||.|||||..|.|.|||.||.||.||||..|...|.|||||.
BL03991___gly 1196 GTGTAGAAGCGCTGACAAACAGATTCCCGTTGTATACCGGGCTTGATTAC 1245
BSNT_05637___ 1246 TAA 1248
|||
BL03991___gly 1246 TAA 1248
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