Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_05638 and BL03990
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:27:45
# Commandline: needle
# -asequence dna-align/BSNT_05638___ywlG.1.5803.seq
# -bsequence dna-align/BL03990___ywlG.2.5803.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_05638___ywlG-BL03990___ywlG.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_05638___ywlG-BL03990___ywlG.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_05638___ywlG
# 2: BL03990___ywlG
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 561
# Identity: 401/561 (71.5%)
# Similarity: 401/561 (71.5%)
# Gaps: 36/561 ( 6.4%)
# Score: 1341.5
#
#
#=======================================
BSNT_05638___ 1 ATGAATGA-GTTGAAACAAACGTGGAAGACGATGCTGT-----CTGAGTT 44
|||||..| .||| ||||.||.||| || |.||.| .|||.||
BL03990___ywl 1 ATGAAAAATCTTG-AACAGACATGG----CG-TTCTATATTAGATGAATT 44
BSNT_05638___ 45 TCAGGACCAAGCGGAATTGAAACAAGATCAGCTCTTCGTCCTTGGATGCA 94
|||..|.||||||.|.|||....|||..||..||.|||||.|.||.||||
BL03990___ywl 45 TCATCAGCAAGCGAATTTGCGCGAAGGCCACATCGTCGTCATCGGCTGCA 94
BSNT_05638___ 95 GCACGAGCGAAGTGGCCGGCAGCCGGATCGGCACATCGGGCAGTGTAGAT 144
||||.|||||.||||||||.||.||.||||||||.|||||.||.|.|.|.
BL03990___ywl 95 GCACAAGCGAGGTGGCCGGAAGGCGCATCGGCACTTCGGGAAGCGAACAA 144
BSNT_05638___ 145 ATCGCTGAAAGC-ATCTACAGCGGACTTGCTGAGCTCCGGGAAAAAACGG 193
||||||| |||| .||||||..|||||.|..||||||.||||.|.|||.|
BL03990___ywl 145 ATCGCTG-AAGCGGTCTACAAAGGACTGGAAGAGCTCAGGGACAGAACAG 193
BSNT_05638___ 194 GAATCCATCTGGCGTTTCAATGCTGCGAGCATTTAAACAGAGCGCTTGTC 243
|||||...||.||.|||||.||||||||.|||||||||||.|||.|.||.
BL03990___ywl 194 GAATCGCCCTCGCTTTTCAGTGCTGCGAACATTTAAACAGGGCGTTGGTT 243
BSNT_05638___ 244 GTCGAAGCAGAAACAGC-CAAGCTGTTCAGGCTTCCAACCG----TTTCT 288
|||||.|.||||||.|| .|||| .|.|.|.|||| ||| ||||
BL03990___ywl 244 GTCGAGGAAGAAACGGCGAAAGC-ATACCGTCTTC---CCGTTGTTTTC- 288
BSNT_05638___ 289 GCCGTGCCCGTTCCAAAAGCGGGCGGAGCGATGGCGTCTTATGCGTTTAA 338
|||.|.||.||.||.||||||||.|||.|||||||.||.|||||.|.|||
BL03990___ywl 289 GCCATTCCTGTCCCGAAAGCGGGGGGATCGATGGCTTCATATGCCTATAA 338
BSNT_05638___ 339 GCAGATGAAGTCTCCTGTTCTTGTTGAAACCATTCAGGCTGACGCCGGAA 388
.||.||||||.|||||||||||||||||...||..||||.||.||.||.|
BL03990___ywl 339 ACATATGAAGGCTCCTGTTCTTGTTGAACAAATAGAGGCCGATGCGGGGA 388
BSNT_05638___ 389 TTGATATAGGCGATACGTTTATCGGCATGCATCTGAAGCCGGTGGCTGTC 438
|.||.||.|||||.||||||||.||.||||||.|.|||||.||.||.||.
BL03990___ywl 389 TCGACATCGGCGACACGTTTATAGGAATGCATTTAAAGCCTGTTGCCGTT 438
BSNT_05638___ 439 CCTGTGCGTGTCTCTC-AAAACAGCCTCGGTTCAGCTCATGTGACATTGG 487
|||||.||.||||||| ||||||| ||.||...|||.||.|||||..|.|
BL03990___ywl 439 CCTGTCCGCGTCTCTCAAAAACAG-CTAGGCGAAGCGCACGTGACGCTTG 487
BSNT_05638___ 488 CGCGTACACGGCCGAAACTAATCGGCGGAGTGCGGGCGGTTTATGA---- 533
||||.|||.|||||||.||.||.||.||.||.||.||.||.|||||
BL03990___ywl 488 CGCGGACAAGGCCGAAGCTGATTGGAGGCGTCCGCGCCGTCTATGAAGCG 537
BSNT_05638___ 534 GTGT-GAATGA 543
|.|| |
BL03990___ywl 538 GAGTAG----- 543
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