Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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DNA alignment: BSNT_05656 and BL03976

See Amino acid alignment / Visit BSNT_05656 in genome browser / Return to Orthologue table
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# Program: needle
# Rundate: Mon  8 Mar 2010 06:27:46
# Commandline: needle
#    -asequence dna-align/BSNT_05656___ywkA.1.5803.seq
#    -bsequence dna-align/BL03976___maeA.2.5803.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile dna-align/BSNT_05656___ywkA-BL03976___maeA.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_05656___ywkA-BL03976___maeA.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_05656___ywkA
# 2: BL03976___maeA
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 1730
# Identity:    1285/1730 (74.3%)
# Similarity:  1285/1730 (74.3%)
# Gaps:          58/1730 ( 3.4%)
# Score: 4585.0
# 
#
#=======================================

BSNT_05656___      1 TTGAATAACATAAAAAAAACGAAAGAAGGCCACTTAGAAACAACTCTTAG     50
                     .||||.|||||.|.||.||||||.|||||.||.||.||.||..||.|..|
BL03976___mae      1 GTGAACAACATGAGAAGAACGAAGGAAGGACATTTGGAGACTTCTTTGCG     50

BSNT_05656___     51 AGGAAAAGAAGTTTTATCTATTCCTACTTTAAATAAAGGCGTTGCTTTTT    100
                     .||.|||||.|||.|.||.|||||.||..||||||||||.|||||.||||
BL03976___mae     51 GGGTAAAGACGTTCTTTCCATTCCAACGCTAAATAAAGGTGTTGCATTTT    100

BSNT_05656___    101 CAATAGAAGAAAGACAAGAA-CTCGGCTTAGAAGGGCTTCTGCCGCCAAC    149
                     |..|.||||||||| ||||| |||||..|||||||||||||||||||.||
BL03976___mae    101 CTCTTGAAGAAAGA-AAGAACCTCGGTCTAGAAGGGCTTCTGCCGCCGAC    149

BSNT_05656___    150 TGTACTTTCT----CTTGATCAACAAGCACAACGCGCGTACGAGCAA--T    193
                     ||    ||||    ||||||||.||.|||.||||.||.|||||.|||  |
BL03976___mae    150 TG----TTCTCAGCCTTGATCAGCAGGCAGAACGGGCTTACGAACAATTT    195

BSNT_05656___    194 TCCAAGCG-CAGCCTGACCGCCTTCGTCAAAATGTTTACTTAAGTGATCT    242
                     |||   || ||.||||||.|.|||||.|||||.||.||.||.|..|||| 
BL03976___mae    196 TCC---CGTCAACCTGACAGACTTCGCCAAAACGTATATTTGAACGATC-    241

BSNT_05656___    243 TGC-AAACCGTAACGAAGTTCTTTTCTATAAATTGCTGAAAAACCATCTT    291
                     ||| ||||.|.||||||||.||||||||||||||..||.|||||||.||.
BL03976___mae    242 TGCAAAACAGAAACGAAGTGCTTTTCTATAAATTATTGCAAAACCACCTG    291

BSNT_05656___    292 CGCGAAATGCTTCCTGTTGTGTACACGCCAACAGTTGGTGAAGCGATTCA    341
                     ||.|||||||||||.|||||.||.|||||.||.||.||.|||||||||||
BL03976___mae    292 CGTGAAATGCTTCCGGTTGTCTATACGCCTACTGTCGGCGAAGCGATTCA    341

BSNT_05656___    342 GGAATACAGCCATGAATATAGAAGACCTCAAGGAATCTACTTGTCAATCG    391
                     ||||||||||||.|||||..|.|||||.||.||..|.|||||||||||||
BL03976___mae    342 GGAATACAGCCACGAATACCGCAGACCGCACGGCGTTTACTTGTCAATCG    391

BSNT_05656___    392 ACAACATTGACGGTATTGAAAAAGCGTTTGAAAACCTTCACGCGACAGCA    441
                     |..|.||.|||||.||.||||..||.|||.|||||||.||.||..|.||.
BL03976___mae    392 ATGATATGGACGGAATCGAAACGGCTTTTAAAAACCTGCAGGCATCTGCT    441

BSNT_05656___    442 GGCGATATTGATCTTATCGTTGCTACTGACTCCGAAAGCATTCTCGGTAT    491
                     |..||.||.|||.|.|||||.|||||.||.||||||||||||.|.||.||
BL03976___mae    442 GATGACATCGATTTGATCGTCGCTACAGATTCCGAAAGCATTTTGGGGAT    491

BSNT_05656___    492 CGGTGACTGGGGTGTAGGCGGTATTAATATCGCAATCGGTAAATTGGCTG    541
                     |||.||||||||.||.||.||.||.|||||.||.||.|||||..|.||.|
BL03976___mae    492 CGGCGACTGGGGCGTCGGAGGCATCAATATTGCGATTGGTAAGCTTGCAG    541

BSNT_05656___    542 TTTACACTGCTGCAGCTGGTATTGACCCTAGCCGTGTTATCCCGGTTGTG    591
                     |.||.||.||.|||||.||.||.||.||.|||||.|||||||||||.||.
BL03976___mae    542 TATATACGGCGGCAGCGGGAATCGATCCGAGCCGCGTTATCCCGGTCGTA    591

BSNT_05656___    592 CTTGATGTCGGTACGAACAACGAAAAACTTCTAAACGATCCTTTATATAT    641
                     ||.||||||||.|||||.||.||||||||.|||||||||||..|.|||||
BL03976___mae    592 CTGGATGTCGGAACGAATAATGAAAAACTGCTAAACGATCCGCTCTATAT    641

BSNT_05656___    642 TGGTAACAAGCATGAACGTGTTCAAGGTGAACGCTACGAAGCTTTCATTG    691
                     .||.|||...|||...|||||..||||.||.|||||.|||...||.||.|
BL03976___mae    642 CGGAAACCGTCATCCGCGTGTAGAAGGCGAGCGCTATGAACAATTTATCG    691

BSNT_05656___    692 ACGCTTATGTAAAAGCTGCATTGAAATTCTTCCCTAAAGCGCTTCTTCAC    741
                     ||||||||||..||.|.||||||||..|.||||||||.||||||||.|||
BL03976___mae    692 ACGCTTATGTCGAAACAGCATTGAAGCTTTTCCCTAACGCGCTTCTACAC    741

BSNT_05656___    742 TGGGAAGACCTTGGCAACAAAAATGCACGCAACATCATGAAAAAATACAA    791
                     ||||||||..|.||.||.||||||||.|||||.|||||||..|||||.||
BL03976___mae    742 TGGGAAGATTTCGGAAATAAAAATGCCCGCAATATCATGAGTAAATATAA    791

BSNT_05656___    792 TCATGAAATCCTG--ACATTTAATGATGATATTCAAGGTACTGGCGCGAT    839
                     .|||.||||  ||  |||||||||||||||||||||||.||.||.||.||
BL03976___mae    792 CCATAAAAT--TGCAACATTTAATGATGATATTCAAGGAACAGGGGCTAT    839

BSNT_05656___    840 TACACTTGCTGG-TGTGCTT---GCCGCTATGAAGAAAACAGGCGCTTCT    885
                     .||    ||||| ||.|.||   ||.|||.|.||.||.||.|||.|.|||
BL03976___mae    840 CAC----GCTGGCTGCGATTTTAGCAGCTGTCAAAAAGACCGGCACGTCT    885

BSNT_05656___    886 ATTAAAGATCAGCGTGTTGTTATCTTCGGTGCCGGTTCTGCTGGTATCGG    935
                     .|.|||||.||.||.||.||.||||||||..|.||||||||||||||.||
BL03976___mae    886 TTGAAAGACCACCGGGTCGTCATCTTCGGACCTGGTTCTGCTGGTATAGG    935

BSNT_05656___    936 TATTGCTGACCAAATCCGTGACACAATGGTGCTAGCCGGATTATCTGAAG    985
                     .||.||||||||||||||.|||||.||||||||.|..||..|.||.||||
BL03976___mae    936 AATCGCTGACCAAATCCGCGACACCATGGTGCTTGAAGGGCTTTCAGAAG    985

BSNT_05656___    986 AAGAAGCTAACAAACGT---TTCTACACACTTGATTACAGAGGCTTGCTG   1032
                     |||||||   |||.|||   ||||..|||.|.|||||||||||.||..|.
BL03976___mae    986 AAGAAGC---CAACCGTGCATTCTGGACAGTCGATTACAGAGGATTATTA   1032

BSNT_05656___   1033 ACTGA-AGACATCGAAGGCATCCTTGATTTCCAAAGACCTTACCTTCGCA   1081
                     || || ||.|||.||....|||.|.|||||||||..|||.||..|.|||.
BL03976___mae   1033 AC-GACAGGCATGGATCAAATCATGGATTTCCAAGAACCGTATTTGCGCG   1081

BSNT_05656___   1082 ATGCGGATGAAGTGAAAGACTGGAAGCGTGATGAAAAAGGTCAAATTCCA   1131
                     ||.||||.|||||||||||.|||||.||..|||||||.||..|.|||.|.
BL03976___mae   1082 ATACGGAAGAAGTGAAAGATTGGAAACGCAATGAAAAGGGAGAGATTTCC   1131

BSNT_05656___   1132 TTCGATGAAGTTGTTCGTCAAGCGAAACCAACAATCTTGATTGGTACTTC   1181
                     ||.||.|||||..|.|||||||.|||.||.||.|||.||||||||||.||
BL03976___mae   1132 TTTGAGGAAGTCATCCGTCAAGTGAAGCCTACGATCCTGATTGGTACATC   1181

BSNT_05656___   1182 AGGGGTTTCAGGTGCATTCACAGAGGAAATTGTAAAAGAAATGGCATCTC   1231
                     |||.|||.|.||.||.||.|..||.|||||..|.|||||.|||||..|||
BL03976___mae   1182 AGGTGTTGCCGGCGCCTTTAGTGAAGAAATCATCAAAGAGATGGCGGCTC   1231

BSNT_05656___   1232 ACGTA--GACCGTCCGGTTATCATGCCGATGTCTAACCCGACTCACCTTG   1279
                     |  ||  ||.|||||.||.||..||||||||||.||.|||||.||.||.|
BL03976___mae   1232 A--TACTGAGCGTCCTGTGATTCTGCCGATGTCAAATCCGACACATCTGG   1279

BSNT_05656___   1280 CTGAAGCTGTTCCTGAAGATCTGTTCAAATGGACTGACGGAAAAGTGCTT   1329
                     |.|||||||||||||||||..|||||||||||||.||||||||||.||||
BL03976___mae   1280 CCGAAGCTGTTCCTGAAGACTTGTTCAAATGGACGGACGGAAAAGCGCTT   1329

BSNT_05656___   1330 ATTGCAACAGGAAGCCCATTTGACAATGTAGAATACAACGGTGTTTCTTA   1379
                     .|.||.||.||||||||.|||||...|||.||.|||||.||.||.....|
BL03976___mae   1330 GTGGCGACGGGAAGCCCGTTTGAAGCTGTTGAGTACAATGGCGTGAAACA   1379

BSNT_05656___   1380 TGAAATCGGACAATCTAACAACGCATTCGCGTTCCCTGGTCTTGGACTTG   1429
                     .||||||||||||||.||.|||||.||.|..||||||||..|.||.||.|
BL03976___mae   1380 CGAAATCGGACAATCCAATAACGCTTTTGTATTCCCTGGATTAGGCCTGG   1429

BSNT_05656___   1430 GTTCAATTGTAGCTGAAGCGCGTATCATTAC-ACCTGCTATGTTTGCTGC   1478
                     ||.||||.||.||..|||||....||||.|| |.|.|| |||||||||||
BL03976___mae   1430 GTACAATCGTTGCGAAAGCGAAAGTCATCACAAACGGC-ATGTTTGCTGC   1478

BSNT_05656___   1479 AACTGCTGATGCGATTGCTGAA-ATGGTTGATTTTGAAACACCTGGAGCA   1527
                     |.||||..|.|||.|.|| ||| |||||.|||..|||||..||.||.|||
BL03976___mae   1479 ATCTGCCAACGCGGTCGC-GAACATGGTGGATCATGAAAAGCCGGGTGCA   1527

BSNT_05656___   1528 GGATTGCTTCCAAGCATTGATAAGCTTCAAGAGGTTTCTATCCAAGTTGC   1577
                     ||..|.||.||.|..||.||..|.||.|||||.||.||..|.|||||.||
BL03976___mae   1528 GGTCTTCTGCCGAAAATCGACGACCTGCAAGACGTATCCGTTCAAGTGGC   1577

BSNT_05656___   1578 GATTGCCGTTGCTGAAGCAGCAATTAAAGACGGCGTGG--CAAATCGTCA   1625
                     |||.|.|||||...||||.||.||||||||||||||||  |||.|  |||
BL03976___mae   1578 GATCGACGTTGTAAAAGCTGCCATTAAAGACGGCGTGGCCCAAGT--TCA   1625

BSNT_05656___   1626 GCCTGAAGATGT-GAAACAAGCGGTACTTGATGCAATGTGGACACCTGAA   1674
                     |||||||||||| |||| |.||.||.|..||.||.||||||...||.||.
BL03976___mae   1626 GCCTGAAGATGTCGAAA-AGGCTGTCCGCGAAGCCATGTGGCGTCCGGAG   1674

BSNT_05656___   1675 TACAAAAAAGTCATCGCGAAATAA------   1698
                     ||.||||.|.|..|.||.|||.||      
BL03976___mae   1675 TATAAAACAATTGTTGCAAAACAAGACTAA   1704


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