Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_05664 and BL03972
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:27:46
# Commandline: needle
# -asequence dna-align/BSNT_05664___glpX.1.5803.seq
# -bsequence dna-align/BL03972___glpX.2.5803.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_05664___glpX-BL03972___glpX.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_05664___glpX-BL03972___glpX.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_05664___glpX
# 2: BL03972___glpX
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 973
# Identity: 751/973 (77.2%)
# Similarity: 751/973 (77.2%)
# Gaps: 14/973 ( 1.4%)
# Score: 2859.0
#
#
#=======================================
BSNT_05664___ 1 ATGGAAAGAAGTTTATCAATGGAATTGGTACGTGTGACCGAAGCTGCGGC 50
|||||||||||.|||||.||||||.|.||.||||||||.|||||.||.||
BL03972___glp 1 ATGGAAAGAAGCTTATCGATGGAACTTGTTCGTGTGACAGAAGCGGCTGC 50
BSNT_05664___ 51 ATTGGC----ATCAGCAAGATGGATGGGCCGGGGAAAAAAAGATGAGGCT 96
|| .|||||..|.||||||||..|.||.||||||||.||.||.
BL03972___glp 51 ----GCTAAAGTCAGCGCGCTGGATGGGAAGAGGTAAAAAAGACGAAGCC 96
BSNT_05664___ 97 GATGAAGCGGCAACAAGTGCAATGAGAGACGTTTTTGATACAGTGCCGAT 146
||.||.||.||.|||||.||.|||||.||.||.|||||.||..|.||.||
BL03972___glp 97 GACGACGCTGCGACAAGCGCCATGAGGGATGTGTTTGACACCATTCCTAT 146
BSNT_05664___ 147 GAAAGGGACCGTTGTAATCGGTGAAGGGGAAATGGACGAAGCGCCGATGC 196
|||.||.||.||.||||||||.||||||||||||||||||||||||||||
BL03972___glp 147 GAAGGGAACGGTGGTAATCGGAGAAGGGGAAATGGACGAAGCGCCGATGC 196
BSNT_05664___ 197 TGTATATCGGGGAAAAACTCGGAAACGGGTACGGCCCTCGCGTTGATGTC 246
|.|||||.||.|||||.|||||.|||||.|||||||||||.||.||.||.
BL03972___glp 197 TTTATATTGGAGAAAAGCTCGGCAACGGCTACGGCCCTCGAGTAGACGTA 246
BSNT_05664___ 247 GCAGTTGACCCTCTTGAAGGCACAAACATCTTAGCAAGCGGCGGCTGGAA 296
|||||.||||||||.|||||.||.||||||.|.||.||||||||.|||||
BL03972___glp 247 GCAGTAGACCCTCTCGAAGGGACGAACATCGTCGCTAGCGGCGGATGGAA 296
BSNT_05664___ 297 CGCGCTGACGGTGATCGCTGTCGCAGACCACGGCACTCTGCTGAATGCTC 346
|||.||..|.||.||.||.||.||.||.|||||.|..|||||||||||.|
BL03972___glp 297 CGCTCTCGCAGTCATTGCGGTGGCTGATCACGGAAACCTGCTGAATGCGC 346
BSNT_05664___ 347 CTGACATGTATATGCAAAAAATCGCAGTCGGTCCGGAAGCGGTGGGCTGC 396
||||||||||||||.|.||||||||.||.|||||.|||||.||.||||||
BL03972___glp 347 CTGACATGTATATGGATAAAATCGCTGTAGGTCCTGAAGCTGTAGGCTGC 396
BSNT_05664___ 397 ATTGACATCGAAGCACCTGTCATTGACAACCTTAAAGCGGTGGCAAAAGC 446
||.||.||.|||||.|||||.|||||.|||.|.|||||.|||||||||||
BL03972___glp 397 ATCGATATTGAAGCGCCTGTGATTGATAACTTGAAAGCTGTGGCAAAAGC 446
BSNT_05664___ 447 GAAAAACAAGGACGTTGAGGACGTCGTTGCCACAATTTTAAACCGTGAAA 496
.||.||.||.||.||.||.||.||.||.|||||.|||||.||||||....
BL03972___glp 447 AAAGAATAAAGATGTGGAAGATGTTGTAGCCACGATTTTGAACCGTCCGC 496
BSNT_05664___ 497 GACACGAAAAAATCATTTCC--GAGCTTCGTGAGGCCGGCGCCAGAATCA 544
|.||.||.||||||| ||| ||||||||.||.||.|||||||||||||
BL03972___glp 497 GGCATGAGAAAATCA--TCCATGAGCTTCGCGAAGCAGGCGCCAGAATCA 544
BSNT_05664___ 545 AATTGATCAATGACGGCGATGTCGCAGGCGCCATCAACACGGCTTTCGAC 594
|..|||||||||||||.||.||.||.||.||.||.|||||.|||||.||.
BL03972___glp 545 AGCTGATCAATGACGGGGACGTGGCCGGTGCGATTAACACCGCTTTTGAT 594
BSNT_05664___ 595 CACACGGGCGTTGATATCCTGTTCGGATCAGGCGGCGCTCCCGAGGGTGT 644
||.||.|||||.|||||..|.|||||.|||||.||||||||.||.||.||
BL03972___glp 595 CATACAGGCGTCGATATTTTATTCGGCTCAGGAGGCGCTCCGGAAGGCGT 644
BSNT_05664___ 645 GCTTTCCGCTGTTGCGCTAAAAGCACTCGGAGGAGAAA-TCATTGGTAAA 693
.||.||.||||||||.||.|||||.||||||||.|||| ||| .||.||.
BL03972___glp 645 ACTCTCGGCTGTTGCACTCAAAGCTCTCGGAGGGGAAATTCA-CGGAAAG 693
BSNT_05664___ 694 CTTCTTCCGCAAAGCGAAGAAGAAATCACTCGCTGTCACAAAATGGGCCT 743
||||||||.|||||.||.||||||.|.|..||||||.|.||.|||||.||
BL03972___glp 694 CTTCTTCCTCAAAGTGAGGAAGAACTGAGACGCTGTGAAAAGATGGGGCT 743
BSNT_05664___ 744 TGATTTAAGCAAAGTCCTTCGCATGGAAGACCTTGTGAAGGGTGATGACG 793
||||....|||||||.||.||||||||||||||.||.||.||.||.||.|
BL03972___glp 744 TGATACGGGCAAAGTGCTCCGCATGGAAGACCTCGTCAAAGGAGACGATG 793
BSNT_05664___ 794 CGATTTTTGCAGCTACAGGGGTTACTGACGGCGAGCTGTTAAAAGGAGTT 843
|||||||.||.||.||.||.||.||.|||||.|||||..|.|||||.||.
BL03972___glp 794 CGATTTTCGCCGCAACTGGCGTCACAGACGGAGAGCTCCTGAAAGGCGTG 843
BSNT_05664___ 844 CAATTCAAAGGCTCTGTCGGTACAACTGAAAGCTTAGTTATCCGCGCAAA 893
|||||||||||.|||||.||.||.||..|.|||.||||.||..|.|||||
BL03972___glp 844 CAATTCAAAGGATCTGTTGGAACGACCCACAGCGTAGTCATGAGGGCAAA 893
BSNT_05664___ 894 ATCGGGCACTGTTCGTTTCGTTGATGGCAGACACAGCTTGAAAAAGAAAC 943
|||.||.||.||.||.||.||.||.||.||||||||..|.||.||.||||
BL03972___glp 894 ATCCGGTACGGTACGGTTTGTGGACGGAAGACACAGTCTCAAGAAAAAAC 943
BSNT_05664___ 944 CAAATCTTGTAATCCGTCCATAA 966
|.||.||.||.|||||.||||||
BL03972___glp 944 CTAACCTAGTCATCCGGCCATAA 966
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