Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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DNA alignment: BSNT_05664 and BL03972

See Amino acid alignment / Visit BSNT_05664 in genome browser / Return to Orthologue table
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# Program: needle
# Rundate: Mon  8 Mar 2010 06:27:46
# Commandline: needle
#    -asequence dna-align/BSNT_05664___glpX.1.5803.seq
#    -bsequence dna-align/BL03972___glpX.2.5803.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile dna-align/BSNT_05664___glpX-BL03972___glpX.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_05664___glpX-BL03972___glpX.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_05664___glpX
# 2: BL03972___glpX
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 973
# Identity:     751/973 (77.2%)
# Similarity:   751/973 (77.2%)
# Gaps:          14/973 ( 1.4%)
# Score: 2859.0
# 
#
#=======================================

BSNT_05664___      1 ATGGAAAGAAGTTTATCAATGGAATTGGTACGTGTGACCGAAGCTGCGGC     50
                     |||||||||||.|||||.||||||.|.||.||||||||.|||||.||.||
BL03972___glp      1 ATGGAAAGAAGCTTATCGATGGAACTTGTTCGTGTGACAGAAGCGGCTGC     50

BSNT_05664___     51 ATTGGC----ATCAGCAAGATGGATGGGCCGGGGAAAAAAAGATGAGGCT     96
                         ||    .|||||..|.||||||||..|.||.||||||||.||.||.
BL03972___glp     51 ----GCTAAAGTCAGCGCGCTGGATGGGAAGAGGTAAAAAAGACGAAGCC     96

BSNT_05664___     97 GATGAAGCGGCAACAAGTGCAATGAGAGACGTTTTTGATACAGTGCCGAT    146
                     ||.||.||.||.|||||.||.|||||.||.||.|||||.||..|.||.||
BL03972___glp     97 GACGACGCTGCGACAAGCGCCATGAGGGATGTGTTTGACACCATTCCTAT    146

BSNT_05664___    147 GAAAGGGACCGTTGTAATCGGTGAAGGGGAAATGGACGAAGCGCCGATGC    196
                     |||.||.||.||.||||||||.||||||||||||||||||||||||||||
BL03972___glp    147 GAAGGGAACGGTGGTAATCGGAGAAGGGGAAATGGACGAAGCGCCGATGC    196

BSNT_05664___    197 TGTATATCGGGGAAAAACTCGGAAACGGGTACGGCCCTCGCGTTGATGTC    246
                     |.|||||.||.|||||.|||||.|||||.|||||||||||.||.||.||.
BL03972___glp    197 TTTATATTGGAGAAAAGCTCGGCAACGGCTACGGCCCTCGAGTAGACGTA    246

BSNT_05664___    247 GCAGTTGACCCTCTTGAAGGCACAAACATCTTAGCAAGCGGCGGCTGGAA    296
                     |||||.||||||||.|||||.||.||||||.|.||.||||||||.|||||
BL03972___glp    247 GCAGTAGACCCTCTCGAAGGGACGAACATCGTCGCTAGCGGCGGATGGAA    296

BSNT_05664___    297 CGCGCTGACGGTGATCGCTGTCGCAGACCACGGCACTCTGCTGAATGCTC    346
                     |||.||..|.||.||.||.||.||.||.|||||.|..|||||||||||.|
BL03972___glp    297 CGCTCTCGCAGTCATTGCGGTGGCTGATCACGGAAACCTGCTGAATGCGC    346

BSNT_05664___    347 CTGACATGTATATGCAAAAAATCGCAGTCGGTCCGGAAGCGGTGGGCTGC    396
                     ||||||||||||||.|.||||||||.||.|||||.|||||.||.||||||
BL03972___glp    347 CTGACATGTATATGGATAAAATCGCTGTAGGTCCTGAAGCTGTAGGCTGC    396

BSNT_05664___    397 ATTGACATCGAAGCACCTGTCATTGACAACCTTAAAGCGGTGGCAAAAGC    446
                     ||.||.||.|||||.|||||.|||||.|||.|.|||||.|||||||||||
BL03972___glp    397 ATCGATATTGAAGCGCCTGTGATTGATAACTTGAAAGCTGTGGCAAAAGC    446

BSNT_05664___    447 GAAAAACAAGGACGTTGAGGACGTCGTTGCCACAATTTTAAACCGTGAAA    496
                     .||.||.||.||.||.||.||.||.||.|||||.|||||.||||||....
BL03972___glp    447 AAAGAATAAAGATGTGGAAGATGTTGTAGCCACGATTTTGAACCGTCCGC    496

BSNT_05664___    497 GACACGAAAAAATCATTTCC--GAGCTTCGTGAGGCCGGCGCCAGAATCA    544
                     |.||.||.|||||||  |||  ||||||||.||.||.|||||||||||||
BL03972___glp    497 GGCATGAGAAAATCA--TCCATGAGCTTCGCGAAGCAGGCGCCAGAATCA    544

BSNT_05664___    545 AATTGATCAATGACGGCGATGTCGCAGGCGCCATCAACACGGCTTTCGAC    594
                     |..|||||||||||||.||.||.||.||.||.||.|||||.|||||.||.
BL03972___glp    545 AGCTGATCAATGACGGGGACGTGGCCGGTGCGATTAACACCGCTTTTGAT    594

BSNT_05664___    595 CACACGGGCGTTGATATCCTGTTCGGATCAGGCGGCGCTCCCGAGGGTGT    644
                     ||.||.|||||.|||||..|.|||||.|||||.||||||||.||.||.||
BL03972___glp    595 CATACAGGCGTCGATATTTTATTCGGCTCAGGAGGCGCTCCGGAAGGCGT    644

BSNT_05664___    645 GCTTTCCGCTGTTGCGCTAAAAGCACTCGGAGGAGAAA-TCATTGGTAAA    693
                     .||.||.||||||||.||.|||||.||||||||.|||| ||| .||.||.
BL03972___glp    645 ACTCTCGGCTGTTGCACTCAAAGCTCTCGGAGGGGAAATTCA-CGGAAAG    693

BSNT_05664___    694 CTTCTTCCGCAAAGCGAAGAAGAAATCACTCGCTGTCACAAAATGGGCCT    743
                     ||||||||.|||||.||.||||||.|.|..||||||.|.||.|||||.||
BL03972___glp    694 CTTCTTCCTCAAAGTGAGGAAGAACTGAGACGCTGTGAAAAGATGGGGCT    743

BSNT_05664___    744 TGATTTAAGCAAAGTCCTTCGCATGGAAGACCTTGTGAAGGGTGATGACG    793
                     ||||....|||||||.||.||||||||||||||.||.||.||.||.||.|
BL03972___glp    744 TGATACGGGCAAAGTGCTCCGCATGGAAGACCTCGTCAAAGGAGACGATG    793

BSNT_05664___    794 CGATTTTTGCAGCTACAGGGGTTACTGACGGCGAGCTGTTAAAAGGAGTT    843
                     |||||||.||.||.||.||.||.||.|||||.|||||..|.|||||.||.
BL03972___glp    794 CGATTTTCGCCGCAACTGGCGTCACAGACGGAGAGCTCCTGAAAGGCGTG    843

BSNT_05664___    844 CAATTCAAAGGCTCTGTCGGTACAACTGAAAGCTTAGTTATCCGCGCAAA    893
                     |||||||||||.|||||.||.||.||..|.|||.||||.||..|.|||||
BL03972___glp    844 CAATTCAAAGGATCTGTTGGAACGACCCACAGCGTAGTCATGAGGGCAAA    893

BSNT_05664___    894 ATCGGGCACTGTTCGTTTCGTTGATGGCAGACACAGCTTGAAAAAGAAAC    943
                     |||.||.||.||.||.||.||.||.||.||||||||..|.||.||.||||
BL03972___glp    894 ATCCGGTACGGTACGGTTTGTGGACGGAAGACACAGTCTCAAGAAAAAAC    943

BSNT_05664___    944 CAAATCTTGTAATCCGTCCATAA    966
                     |.||.||.||.|||||.||||||
BL03972___glp    944 CTAACCTAGTCATCCGGCCATAA    966


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