Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_05676 and BL03966
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:27:47
# Commandline: needle
# -asequence dna-align/BSNT_05676___pyrG.1.5803.seq
# -bsequence dna-align/BL03966___pyrG.2.5803.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_05676___pyrG-BL03966___pyrG.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_05676___pyrG-BL03966___pyrG.aln
########################################
#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_05676___pyrG
# 2: BL03966___pyrG
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 1633
# Identity: 1291/1633 (79.1%)
# Similarity: 1291/1633 (79.1%)
# Gaps: 50/1633 ( 3.1%)
# Score: 5081.5
#
#
#=======================================
BSNT_05676___ 1 ATGACGAAATATATTTTTGTAACCGGGGGAGTTGTATCCTCACTTGGAAA 50
|||||.||||||||.|||||||||||.||||||||||||||.||||||||
BL03966___pyr 1 ATGACAAAATATATCTTTGTAACCGGAGGAGTTGTATCCTCGCTTGGAAA 50
BSNT_05676___ 51 GGGTATTGTAGCAGCTTCATTAGGGCGTTTGCTGAAAAACCGCGGACTGA 100
.||.|||...||..||||..|.||.||..|||||||.|||.|.||..|||
BL03966___pyr 51 AGGAATTACGGCGTCTTCGCTCGGCCGCCTGCTGAAGAACAGAGGTTTGA 100
BSNT_05676___ 101 ACGTGACGATTCAAAAATTCGATCCATACATCAACGTTGACCCGGGAACA 150
|.||.||.|||||||||||.||.||.||.||||||||.||||||||.||.
BL03966___pyr 101 ATGTCACCATTCAAAAATTTGACCCGTATATCAACGTAGACCCGGGTACG 150
BSNT_05676___ 151 ATGAGCCCGTACCAGCACGGTGAAGTATTCGTAACGGATGACGGCGCTGA 200
|||||||||||.||||||||||||||.||.|||||.||.|||||.||.||
BL03966___pyr 151 ATGAGCCCGTATCAGCACGGTGAAGTGTTTGTAACCGACGACGGTGCGGA 200
BSNT_05676___ 201 AACAGA-CTTGGACCTTGGTCACTATGAGCGTTTTATCGACATTAACCTG 249
|||.|| ||| |||||.||.||.||||||||.|||||||||||.||..|.
BL03966___pyr 201 AACGGATCTT-GACCTCGGCCATTATGAGCGCTTTATCGACATCAATTTA 249
BSNT_05676___ 250 AATAAATTCAGCAACGTGACAACAGGTAAAATCTATTCAACAGTTCTTAA 299
|||||||.||||||||||||||||||.|||||||||||.||.||.||.||
BL03966___pyr 250 AATAAATACAGCAACGTGACAACAGGAAAAATCTATTCCACGGTGCTGAA 299
BSNT_05676___ 300 AAAAGAACGCCGCGGAGATTACCTTGGAGGAACCGTACAGGTCATTCCGC 349
||||||.|||.|.||.|||||..|.||.||||||||||||||.||.||.|
BL03966___pyr 300 AAAAGAGCGCAGAGGCGATTATTTAGGCGGAACCGTACAGGTAATACCTC 349
BSNT_05676___ 350 ACATCACAAACGAATTGAAAGACCGTGTTTACCGCGCAGGGAAAGAGACA 399
|.||||||||.|||.|.|||||||||||.|.||||||.||.|||||.||.
BL03966___pyr 350 ATATCACAAATGAAATTAAAGACCGTGTATTCCGCGCCGGAAAAGAAACG 399
BSNT_05676___ 400 AACGCAGATGTTGTCATTACAGAAATCGGCGGTACTGTCGGAGACATCGA 449
.||||.|||||.||.||.||.|||||||||||.||.|||||.||||||||
BL03966___pyr 400 CACGCTGATGTCGTAATCACTGAAATCGGCGGAACCGTCGGTGACATCGA 449
BSNT_05676___ 450 ATCACTGCCATTCCTTGAAGCGATCCGCCAAATGAAGAGCGACATCGGCC 499
|||.||||||||.|||||||||||||||||.||.||||||||..||||||
BL03966___pyr 450 ATCGCTGCCATTTCTTGAAGCGATCCGCCAGATCAAGAGCGATGTCGGCC 499
BSNT_05676___ 500 GTGAAAACGTAATGTACATCCACTGTACGCTCGTACCTTACATTAAAGCT 549
|.||.||.||.|||||||||||.||||||||.||.||.||..|||||||.
BL03966___pyr 500 GCGACAATGTGATGTACATCCATTGTACGCTTGTTCCATATCTTAAAGCG 549
BSNT_05676___ 550 GCTGGCGAATTAAAAACAAAACCGACACAGCACAGCGTAAAAGAATTGCG 599
||.||.|||.|.||||||||.|||||.||||||||||||||||||.||||
BL03966___pyr 550 GCGGGAGAAATGAAAACAAAGCCGACTCAGCACAGCGTAAAAGAACTGCG 599
BSNT_05676___ 600 CAGCTTGGGCATTCAGCCAAACATCATCGTCGTTCGTACAGAAATGCCGA 649
||||.|.||||||||||||||..||||||||||..|.|||||||||||||
BL03966___pyr 600 CAGCCTCGGCATTCAGCCAAATGTCATCGTCGTGAGAACAGAAATGCCGA 649
BSNT_05676___ 650 TTTCTCAAGATATGAAAGATAAAATCGCGCTTTTCTGCGACATCGATACA 699
|||||||.||.||||||||||||||||||||.|||||||||||.|||.|.
BL03966___pyr 650 TTTCTCAGGACATGAAAGATAAAATCGCGCTCTTCTGCGACATTGATCCT 699
BSNT_05676___ 700 AAAGCGGTTATTGAATGTGAAGATGCGGACAACCTTTACTCCATTCCGCT 749
|||||.||.||.||...||.|||||||||.|..||.|||||||||||.||
BL03966___pyr 700 AAAGCCGTCATCGAGGCTGGAGATGCGGATACGCTCTACTCCATTCCTCT 749
BSNT_05676___ 750 GGAGCTTCAAAAACAAGGGCTTGATAAGCTTGTTTGCGAG-CACATGAAA 798
.||.||||||||||||||.||.||.|..||.|||||| || |||.||||.
BL03966___pyr 750 CGACCTTCAAAAACAAGGCCTGGACAGCCTGGTTTGC-AGCCACTTGAAG 798
BSNT_05676___ 799 TTGGCATGCAAAGAAGCGGAAATGTCCGAGTGGAAAGAGCTTGTTAACAA 848
.|||..||||.||||||.||.|||...|||||||||||.||.||.||.||
BL03966___pyr 799 CTGGATTGCAGAGAAGCCGATATGGAAGAGTGGAAAGAACTCGTCAAAAA 848
BSNT_05676___ 849 AGTCAGCAACCTGTCTCAAACGATTACAATCGGCCTT--GTCGGCAAATA 896
.||.|..||.|||||..|||||.|.||||||| ||| |||||.|||||
BL03966___pyr 849 GGTGAAAAATCTGTCCAAAACGGTAACAATCG--CTTTGGTCGGTAAATA 896
BSNT_05676___ 897 CGTTGAGCTTCCTGACGCATACATTTCTGTTGTCGAGTCTCTCCGCCATG 946
|||||||||.||.||.||.||||||||.|||||.||.||.||.|||||||
BL03966___pyr 897 CGTTGAGCTCCCGGATGCTTACATTTCAGTTGTAGAATCGCTTCGCCATG 946
BSNT_05676___ 947 CGGGCTATGCGTTTGACACAGATGTAAAAGTGAAGTGGATCAACGCGGAA 996
||||.|||||||||||..||||..|..||||.||.||||||||.||||||
BL03966___pyr 947 CGGGTTATGCGTTTGATGCAGACATTCAAGTTAAATGGATCAATGCGGAA 996
BSNT_05676___ 997 GAAGTGACAGAAAACAATATCGCAGAAC----TCACAA-GCGGAACAGAC 1041
||||||||.|||.||||..|.||.||.| |||.|| ||| |||
BL03966___pyr 997 GAAGTGACGGAAGACAACGTTGCCGATCTTGTTCAAAATGCG-----GAC 1041
BSNT_05676___ 1042 GGCATCATTGTGCCGGGCGGATTCGGAGACCGCGGTGTTGAAGGCAAAAT 1091
||.||..||||.||||||||||||||||||||||||||||||||.||||
BL03966___pyr 1042 GGTATTCTTGTTCCGGGCGGATTCGGAGACCGCGGTGTTGAAGGGAAAA- 1090
BSNT_05676___ 1092 CGTCGCGACA---AAATACGCGCGCGAAAACAACATTCCGTTCTTGGGTA 1138
||.||||| |||||.||.||||||.|.||.|||||||||||.||.|
BL03966___pyr 1091 --TCACGACAGTCAAATATGCCCGCGAACAAAAGATTCCGTTCTTCGGCA 1138
BSNT_05676___ 1139 TTTGCTTGGGCATGCAGGTGGCGTCTATTGAATACGCACGAAACGTATTG 1188
|||||.|.||.|||||||||||.||.|||||||||||..|||||||..|.
BL03966___pyr 1139 TTTGCCTCGGAATGCAGGTGGCATCGATTGAATACGCGAGAAACGTGCTC 1188
BSNT_05676___ 1189 GGCTTAAAAGGCGCTCACTCAGCGGAAATTGATCCGTCAACTCAATACCC 1238
|||.|..||||.||.||||||||.|||||.||||||||.||.|..||.||
BL03966___pyr 1189 GGCCTTGAAGGAGCGCACTCAGCCGAAATCGATCCGTCTACACCGTATCC 1238
BSNT_05676___ 1239 GATCATTGATCTTCTTCCTGAACAAAAGGATGTGGAGGATCTCGGGGGAA 1288
|||.||.||.|||||.||||||||||||||..|.||.||.|||||.||||
BL03966___pyr 1239 GATTATCGACCTTCTCCCTGAACAAAAGGACATTGAAGACCTCGGCGGAA 1288
BSNT_05676___ 1289 CGCTTCGTCTCGGCCTTTACCCTTGTAAGCTTGAAGAAGGCACGAAAGCC 1338
|.||.||.|||||.|||||.||.||.||||||.|||||||..|||||||.
BL03966___pyr 1289 CACTGCGCCTCGGACTTTATCCGTGCAAGCTTCAAGAAGGATCGAAAGCA 1338
BSNT_05676___ 1339 TTTGAAGTGTATCAGGATGAAGTGGTGTACGAGCGCCACCGCCACCGCTA 1388
|.|.|.|..|||.|..|||||||||||||.||.|||||||||||||||||
BL03966___pyr 1339 TATCAGGCATATGAAAATGAAGTGGTGTATGAACGCCACCGCCACCGCTA 1388
BSNT_05676___ 1389 TGAGTTTAACAATGAATTCAGACAGCAAATGGAAG-AGCAAGGCTTCGTA 1437
.||.||.||||||||.|||||||||||.||||||| ||| .||.||.|||
BL03966___pyr 1389 CGAATTCAACAATGAGTTCAGACAGCAGATGGAAGAAGC-CGGTTTTGTA 1437
BSNT_05676___ 1438 TTCTCAGGCACAAGCCCTGATGGACGCCTTGTTGAAATCATCGAGCTGAA 1487
||.||.||.|||||||||||.||.||.||.||.|||||.||||||||.||
BL03966___pyr 1438 TTTTCCGGGACAAGCCCTGACGGCCGTCTCGTAGAAATTATCGAGCTTAA 1487
BSNT_05676___ 1488 AGACCATCCTTGGTTCGTGGCTTCTCAGTTCCATCCAGAGTTCAAGTCAA 1537
|||||||||.|||||.||.||.||||||||||||||.||.||.|.|||||
BL03966___pyr 1488 AGACCATCCATGGTTTGTCGCGTCTCAGTTCCATCCTGAATTTACGTCAA 1537
BSNT_05676___ 1538 GACCGACAAGACCTCAGCCTCTATTCAAAGGCTTTATCGGA---GCGTCT 1584
|||||||||||||||||.||||.||||.||.|| |||.| ||.||
BL03966___pyr 1538 GACCGACAAGACCTCAGGCTCTGTTCAGAGACT---TCGTACATGCTTC- 1583
BSNT_05676___ 1585 GTCGAAGCTGCAAA----TCAGAA-----GTAA 1608
||| ||| ||.||| ||||
BL03966___pyr 1584 ------GCT--AAAGACTTCGGAAAAGCTGTAA 1608
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