Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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DNA alignment: BSNT_05766 and BL03956

See Amino acid alignment / Visit BSNT_05766 in genome browser / Return to Orthologue table
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# Program: needle
# Rundate: Mon  8 Mar 2010 06:27:52
# Commandline: needle
#    -asequence dna-align/BSNT_05766___ywfI.1.5803.seq
#    -bsequence dna-align/BL03956___ywfI.2.5803.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile dna-align/BSNT_05766___ywfI-BL03956___ywfI.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_05766___ywfI-BL03956___ywfI.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_05766___ywfI
# 2: BL03956___ywfI
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 772
# Identity:     622/772 (80.6%)
# Similarity:   622/772 (80.6%)
# Gaps:          14/772 ( 1.8%)
# Score: 2483.0
# 
#
#=======================================

BSNT_05766___      1 ATGAGTGAACAGCAAATGACGAATGAAGCGGCAAAAACGCTTGACGGCTG     50
                     |||||.||||||||||..|||||||||||.|||.||||||||||||||||
BL03956___ywf      1 ATGAGCGAACAGCAAAAAACGAATGAAGCCGCACAAACGCTTGACGGCTG     50

BSNT_05766___     51 GTATGCGCTTCATGATTTCCGCACAATGGATTGGACTTCCTGGAAGCTTC    100
                     ||||||.|||||.||||||||.||||||||.|||.|..|.|||||..|.|
BL03956___ywf     51 GTATGCCCTTCACGATTTCCGGACAATGGACTGGTCCGCATGGAAAATGC    100

BSNT_05766___    101 TGTCCAGTGATGAGCGCCA-ATC--TATCATACATGAATTCACTGGGTTG    147
                     |.||.||.||||||||||| |||  |||||   ..|||||.||.||..|.
BL03956___ywf    101 TTTCAAGCGATGAGCGCCAGATCATTATCA---GCGAATTTACCGGCCTT    147

BSNT_05766___    148 CTTGAAAAATGGGGCGTAGCCCAAAAAGAAGGAAAAGGATCGCAAACTCT    197
                     ||||||||||||||.|..|||||||||||||||||.|||...||.||.||
BL03956___ywf    148 CTTGAAAAATGGGGAGCTGCCCAAAAAGAAGGAAACGGAAGCCATACGCT    197

BSNT_05766___    198 TTACAGCATCGTCGGCCAAAAAGCTGATTTTATGCTGATGATCCTTCGTC    247
                     ||||||||||||||||||.|||||.||.||.|||||||||||..|.||.|
BL03956___ywf    198 TTACAGCATCGTCGGCCAGAAAGCGGACTTCATGCTGATGATTTTGCGCC    247

BSNT_05766___    248 CTACAATGGAAGAATTAAATCAAATTGAGCTTGAATTCAACAAATCAAGA    297
                     ||||.|||||.||||||||||||||.||.||.||.|||||.|||||.|.|
BL03956___ywf    248 CTACGATGGAGGAATTAAATCAAATCGAACTCGAGTTCAATAAATCCAAA    297

BSNT_05766___    298 CTTGCTGAGTTCACCATTCCGGCATACTCCTACGTATCAGTGGTAGAGCT    347
                     ||.|||||.|.|||.||.||.||.||.||.||||||||.||.||.|||||
BL03956___ywf    298 CTCGCTGAATACACGATACCTGCTTATTCATACGTATCCGTTGTCGAGCT    347

BSNT_05766___    348 GAGCAACTACTTGGCAAGCGGTGACGGCGATCCTTACGAAAATCCGCATG    397
                     |||||||||..|||.||||||.|||||.||.|||||||||||||||||.|
BL03956___ywf    348 GAGCAACTATATGGGAAGCGGAGACGGAGACCCTTACGAAAATCCGCAAG    397

BSNT_05766___    398 TGCGCGCGCGCCTTTACCCTGAACTGCCGGAATCAAAATATGTATGCTTC    447
                     ||||.||||||||.||||||||.||.|||||..|.||||||||.||||||
BL03956___ywf    398 TGCGGGCGCGCCTGTACCCTGAGCTCCCGGATGCCAAATATGTCTGCTTC    447

BSNT_05766___    448 TATCCAATGGATAAAAGAAGATCCGGCAACGACAACTGGTATATGCTTTC    497
                     |||||.|||||||||||||||||.|||.|.|||||||||||.|||||.||
BL03956___ywf    448 TATCCGATGGATAAAAGAAGATCGGGCGATGACAACTGGTACATGCTGTC    497

BSNT_05766___    498 AATGGAGGAACGCAGAAACTTGATGAGAAGCCACGGTTTAATCGGCCGCA    547
                     .|||||.||..|.||||||||||||.|.||||||||..|.|||||.|||.
BL03956___ywf    498 TATGGAAGAGAGAAGAAACTTGATGCGCAGCCACGGAATGATCGGACGCG    547

BSNT_05766___    548 GCTATGCGGGCAAAGTCAAACAGATCATCACCGGCTCTGTCGGCTTTGAC    597
                     ||||||||||.|||||.||||||||.||.||||||||..||||.||||||
BL03956___ywf    548 GCTATGCGGGAAAAGTAAAACAGATTATTACCGGCTCAATCGGATTTGAC    597

BSNT_05766___    598 GATTACGAGTGGGGCGTTAC---ATTATTCAGCGATGATGTCCTTCAATT    644
                     |||||.||||||||.||.||   .|| ||||  ||||||||.|||||.||
BL03956___ywf    598 GATTATGAGTGGGGTGTCACGCTCTT-TTCA--GATGATGTGCTTCAGTT    644

BSNT_05766___    645 CAAGAAGCTAGTGTACGAAATGCGTTTTGACGAAGTCAGCGCTCGCTATG    694
                     |||.|||||.||.||.||||||||.|||||.|||||.|||||.|||||.|
BL03956___ywf    645 CAAAAAGCTCGTCTATGAAATGCGCTTTGATGAAGTAAGCGCCCGCTACG    694

BSNT_05766___    695 GCGAATTTGGTTCATTCTTTGTCGGCAATCACCTTTCGCTTGATACA-CT    743
                     |.|||||.|||||.||||||||||||||.|.||||.|....|| ||| ||
BL03956___ywf    695 GTGAATTCGGTTCGTTCTTTGTCGGCAACCGCCTTGCAAAAGA-ACAGCT    743

BSNT_05766___    744 TCCTCAATTCTTATATGTATAA    765
                     .|||..|||.||..||||.|||
BL03956___ywf    744 GCCTGCATTTTTGCATGTGTAA    765


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Natto Genome Project Bacillus subtilis subsp. natto str. BEST195

DNA alignment: BSNT_05766 and BL03956

Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
