Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_05848 and BL03943
See
Amino acid alignment /
Visit
BSNT_05848 in genome browser /
Return to
Orthologue table
########################################
# Program: needle
# Rundate: Mon 8 Mar 2010 06:27:56
# Commandline: needle
# -asequence dna-align/BSNT_05848___ywcA.1.5803.seq
# -bsequence dna-align/BL03943___ywcA.2.5803.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_05848___ywcA-BL03943___ywcA.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_05848___ywcA-BL03943___ywcA.aln
########################################
#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_05848___ywcA
# 2: BL03943___ywcA
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 1546
# Identity: 1179/1546 (76.3%)
# Similarity: 1179/1546 (76.3%)
# Gaps: 11/1546 ( 0.7%)
# Score: 4399.0
#
#
#=======================================
BSNT_05848___ 1 ATGAATATGACTGCTTTTTTATTATTTTTGGCGATTGTTGGTCTGACGCT 50
||||.|...||.||.|||.|.||.|||.|.||.|||||.|..||.|||||
BL03943___ywc 1 ATGAGTGCCACAGCCTTTATTTTGTTTCTTGCCATTGTCGCCCTCACGCT 50
BSNT_05848___ 51 TATTATCACGTATTTTGCAGCGAAGCGGACGAAAACGACGAGTGAGTTTT 100
|.|.||.||||||||.||.||.||.|.|||.||||||.|.|.||||||||
BL03943___ywc 51 TGTCATTACGTATTTCGCCGCTAAACAGACAAAAACGGCCAATGAGTTTT 100
BSNT_05848___ 101 ATACGGCGGGCGGCGGGCTCACCGGCGTTCAGAATGGACTGGCAATTGCC 150
|.||||||||.||.||.||.||||||.||||.||.||||||||.|||||.
BL03943___ywc 101 ACACGGCGGGAGGGGGACTTACCGGCATTCAAAACGGACTGGCTATTGCG 150
BSNT_05848___ 151 GGTGACTACATGTCTGCCGCCTCGTTTCTCGGGATTGCCGGAATGATTGC 200
||.||.||||||||.||.||.||.||.|||||.||||||||.|||||.||
BL03943___ywc 151 GGAGATTACATGTCAGCGGCTTCTTTCCTCGGAATTGCCGGGATGATCGC 200
BSNT_05848___ 201 GTTATATGGATTTGATGGCTTCTTTTACAGCATCGGTTTTCTGGTGGCTT 250
.||..|.||.|||||.||.|||||.|||||||||||.||.||.||.||||
BL03943___ywc 201 TTTGAACGGGTTTGACGGTTTCTTCTACAGCATCGGCTTCCTCGTCGCTT 250
BSNT_05848___ 251 ATCTCGTTGTCTTGTACATCGTGGCGGAGCCGCTTCGGAATCTTGGAAAG 300
||.|.||||||.|.||.||.|||||.||.|||||.||.||.||.||.||.
BL03943___ywc 251 ATTTAGTTGTCCTTTATATTGTGGCAGAACCGCTCCGAAACCTCGGCAAA 300
BSNT_05848___ 301 TACACGATGGCAGACATGATTGCCGCTCGCTTTAAAGAAAAGAAAATCCG 350
|..||.|||||.||||||||||||.||||.||||||.||||||||||.||
BL03943___ywc 301 TTTACAATGGCGGACATGATTGCCTCTCGTTTTAAACAAAAGAAAATTCG 350
BSNT_05848___ 351 CGGTGTCGCGGCTCTCAATACCATTGCCATCTCTACTTTTTATATGATCG 400
|||||||||.||..|.||.||.||..|.|||||.||.|||||||||||.|
BL03943___ywc 351 CGGTGTCGCCGCATTAAACACAATCACGATCTCCACCTTTTATATGATTG 400
BSNT_05848___ 401 CCCAGCTCGTGGGGGCGGGAGCGCTGATCAAACTGCTTCTAGGGCTGGAT 450
|.|||.|.||.||.||.||.|||||||||||.||.||.||.||..|.|||
BL03943___ywc 401 CACAGTTAGTCGGCGCCGGCGCGCTGATCAAGCTTCTGCTCGGCATCGAT 450
BSNT_05848___ 451 TATACCGC-GGCTGTCCTCATCGTCGGAGTGCTGATGACCATTTATGTCG 499
|||| ||| |||.||...|||.|||||.||..||||||||||.||.||||
BL03943___ywc 451 TATA-CGCTGGCAGTGTGCATTGTCGGGGTTTTGATGACCATCTACGTCG 499
BSNT_05848___ 500 TGTTTGGCGGCATGATCGCGACAAGCTGGGTTCAAATTATTAAAGCTGTT 549
|.||.||.||.|||||.||.||.||||||||.||.||.||.||.||.|||
BL03943___ywc 500 TATTCGGAGGAATGATTGCAACCAGCTGGGTCCAGATCATCAAGGCCGTT 549
BSNT_05848___ 550 TTACTGATGGCCGGCACACTCGTGATTTCGATTATCGTGTTTTCGAAATT 599
.|..|||||||.||.||.||..|.||||||.|.|||||.|||||.|||||
BL03943___ywc 550 CTTTTGATGGCGGGGACGCTAATCATTTCGGTCATCGTTTTTTCAAAATT 599
BSNT_05848___ 600 CGGCTTTAGCCTTAATACCATGTTTGAACAGATGAAAACGGCTACTCCGC 649
||||||.|||||.|..|.||||||.|||||.||||||||.||||||||||
BL03943___ywc 600 CGGCTTCAGCCTGACGAACATGTTCGAACAAATGAAAACAGCTACTCCGC 649
BSNT_05848___ 650 TTGGCGCTGATTTTTTGAATCCCGGAAATAAATACAAGGTGCCGCTTGAG 699
|.||.||.||||||.|.||.|||||.|||||.||.||.||.||.|||||.
BL03943___ywc 650 TCGGGGCGGATTTTCTAAACCCCGGCAATAAGTATAAAGTTCCTCTTGAA 699
BSNT_05848___ 700 AC-CTTGTCGTTAAACTTGGCACTCGTGCTGGGAACCGCCGGGCTTCCGC 748
|| ||| ||..|.||.|||||.|||||.||.|||||.|||||.||.||.|
BL03943___ywc 700 ACACTT-TCACTCAATTTGGCGCTCGTCCTTGGAACAGCCGGCCTGCCCC 748
BSNT_05848___ 749 ATATATTGATCCGGTTTTATACCGTTAAGGATGCCAAGACGGCCCGTACA 798
|.||..|.|||||.||||||||.||.||.||||||||.|||||..|.|.|
BL03943___ywc 749 ACATTCTCATCCGCTTTTATACAGTAAAAGATGCCAAAACGGCAAGGAAA 798
BSNT_05848___ 799 TCCGTTGTGTCGGCGACATGGATTATCGGTGTGTTTTACATTATGACGGT 848
||.|||||.|||||.|||||||||||||||.|.|||||.|||||||||||
BL03943___ywc 799 TCGGTTGTCTCGGCAACATGGATTATCGGTATATTTTATATTATGACGGT 848
BSNT_05848___ 849 TTTTCTCGGCTTTGGTGCCGCGGCATTTGTCGGTTTTGACGCGATTACAG 898
.||||||||.||||||||.||.||.||||||||||||||....|||..||
BL03943___ywc 849 CTTTCTCGGTTTTGGTGCTGCCGCTTTTGTCGGTTTTGAAAACATTTTAG 898
BSNT_05848___ 899 CGGCTGATCAAGCGGGAAATATGGCGGCTCCGCTTTTAGCAAAAGCGCTC 948
|.||.|||.|||||||.||||||||.||.|||||..|.||..|.||||||
BL03943___ywc 899 CTGCCGATAAAGCGGGGAATATGGCCGCACCGCTGCTTGCTCAGGCGCTC 948
BSNT_05848___ 949 GGGGGAGACTTTCTGTTCGCGTTTGTATCAGCTATCGCCTTTGCCACCAT 998
||.|||||.|||||||||||.||.||.|||||.|||||.||.|||||.||
BL03943___ywc 949 GGCGGAGATTTTCTGTTCGCCTTCGTCTCAGCCATCGCTTTCGCCACGAT 998
BSNT_05848___ 999 TTTGGCTGTCGTGACAGGGTTGGTGCTGTCTGCCGCCTCAGCATTTGCCC 1048
||||||.||.||.|||||..|.||.|||||.||.||.||.||.|||||.|
BL03943___ywc 999 TTTGGCGGTAGTTACAGGACTTGTCCTGTCGGCGGCTTCTGCTTTTGCGC 1048
BSNT_05848___ 1049 ATGATATTTACAGCCAGATCATCAGAAAGGGAGAAGCAACTGAAAAAGAA 1098
|||||||.|||||||||||.||||||||.||.|..||.||.||||||||.
BL03943___ywc 1049 ATGATATATACAGCCAGATTATCAGAAAAGGCGCGGCTACGGAAAAAGAG 1098
BSNT_05848___ 1099 CAAATGAAAGCGGCCAGATGGGCTTCTGTCGCCGTGTCAGTACTCTCGAT 1148
|||||||..||.||.||.||||||||..|||.|||.||.||.||.||.||
BL03943___ywc 1099 CAAATGATTGCTGCAAGGTGGGCTTCCATCGGCGTATCCGTCCTTTCAAT 1148
BSNT_05848___ 1149 TCTCCTTGCGATTTTTGCACAATCCTTAAATGTGGCGTTCCTTGTTGCAC 1198
|||.|||||..|.|||||.|||||..|.|||||.|||||.|||||..|.|
BL03943___ywc 1149 TCTGCTTGCTGTCTTTGCCCAATCGCTGAATGTCGCGTTTCTTGTCTCGC 1198
BSNT_05848___ 1199 TCGCGTTTGCGGTAGCCGCCAGCGCAAACCTTCCGCTGATTGTGTTTACA 1248
|.||.|||||.||.||.||.|||||.||..|.|||||.|||.|.||.||.
BL03943___ywc 1199 TAGCATTTGCCGTGGCGGCAAGCGCCAATTTGCCGCTTATTATCTTCACC 1248
BSNT_05848___ 1249 GTCTTCTGGAAACGATTCAATGCCTCAGGCGCTCTATGG--GGCAGCCTG 1296
||||||||||||.|||||||||||.|.|||| ||.||| |||||||||
BL03943___ywc 1249 GTCTTCTGGAAAAGATTCAATGCCGCCGGCG--CTTTGGCCGGCAGCCTG 1296
BSNT_05848___ 1297 ACAGGCCTGATCAGCGCGCTTGTGCTGGTATCGATGAGCCCTAGTGTGTG 1346
||.|||||..|.|||||.||..|.||.||.||.||.|||||.||.||.||
BL03943___ywc 1297 ACCGGCCTTTTAAGCGCTCTGATCCTTGTCTCCATCAGCCCGAGCGTATG 1346
BSNT_05848___ 1347 GGACCCGGCCGGAGGTGCTATTTTTACCGGTGATCCGCTCATTCCGCTGT 1396
|||||||||||||...||.||.|||...||.||.||||||||.|||||.|
BL03943___ywc 1347 GGACCCGGCCGGAAACGCCATCTTTGTTGGAGACCCGCTCATCCCGCTTT 1396
BSNT_05848___ 1397 CTAATCCAGGAATTATTTCCATCCCGCTCGGCTTTCTCGGCGCGTGGCTC 1446
|.||.||.|||||.||.||.||.||||||||||||.|.|||||.|..||.
BL03943___ywc 1397 CCAACCCGGGAATCATCTCTATTCCGCTCGGCTTTTTAGGCGCTTATCTT 1446
BSNT_05848___ 1447 GGAACGATGCTGTCGTCTGATAAAACAATTGATGAAGATACGTTTGCAGA 1496
||||||||.||.||.|| .|||||...||.|.||||..||||||||||
BL03943___ywc 1447 GGAACGATTCTATCTTC---AAAAACCCCTGGTCAAGACGCGTTTGCAGA 1493
BSNT_05848___ 1497 AATACAGGTGAAGGCGCATACTGGCGTCCATATGGAACAGGAATAA 1542
|||.|||||.||.||||||||.|||.||||.|||||.||....|||
BL03943___ywc 1494 AATTCAGGTCAAAGCGCATACAGGCATCCACATGGATCAATCTTAA 1539
#---------------------------------------
#---------------------------------------
Copyright (C) Natto Genome Project, 2009-2010. All rights reserved.