Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_00932 and BL03937
See
Amino acid alignment /
Visit
BSNT_00932 in genome browser /
Return to
Orthologue table
########################################
# Program: needle
# Rundate: Mon 8 Mar 2010 06:22:29
# Commandline: needle
# -asequence dna-align/BSNT_00932___ydfI.1.5803.seq
# -bsequence dna-align/BL03937___ydfI.2.5803.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_00932___ydfI-BL03937___ydfI.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_00932___ydfI-BL03937___ydfI.aln
########################################
#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_00932___ydfI
# 2: BL03937___ydfI
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 642
# Identity: 593/642 (92.4%)
# Similarity: 593/642 (92.4%)
# Gaps: 3/642 ( 0.5%)
# Score: 2770.0
#
#
#=======================================
BSNT_00932___ 1 ATGAATAAGGTTTTAATCGTTGATGACCATCTTGTCGTGAGGGAAGGTCT 50
||||||||||||||||||||||||||||||||||||||||||||||||||
BL03937___ydf 1 ATGAATAAGGTTTTAATCGTTGATGACCATCTTGTCGTGAGGGAAGGTCT 50
BSNT_00932___ 51 GAAGCTTTTAATTGAAACGAATGATCAATACACCATTATAGGAGAGGCGG 100
|||||||||||||||||||||||||||.||||.|||.|||||||||||||
BL03937___ydf 51 GAAGCTTTTAATTGAAACGAATGATCACTACATCATCATAGGAGAGGCGG 100
BSNT_00932___ 101 AAAATGGAAAAGTCGCAGTCCGTCTTGCAGATGAATTAGAACCGGATATC 150
|||||||.||||..|||||.||.|||||||||||||||.||||||||||.
BL03937___ydf 101 AAAATGGCAAAGCAGCAGTTCGCCTTGCAGATGAATTAAAACCGGATATT 150
BSNT_00932___ 151 ATTCTGATGGATTTGTATATGCCGGAGATGAGCGGGTTAGAGGCCATTAA 200
|||||.|||||||||||||||||||||||||||||||||||.||||||||
BL03937___ydf 151 ATTCTCATGGATTTGTATATGCCGGAGATGAGCGGGTTAGAAGCCATTAA 200
BSNT_00932___ 201 ACAAATAAAAGAAAAACACGATACCCCCATCATTATTTTGACTACATATA 250
||.||||||||||||||||||.|.|||||||||||||||||||||.||||
BL03937___ydf 201 ACTAATAAAAGAAAAACACGACATCCCCATCATTATTTTGACTACGTATA 250
BSNT_00932___ 251 ATGAAGATCACTTAATGATCGAAGGGATTGAATTAGGAGCGAAAGGATAT 300
|||||||||||||||||||||||||.|||||||||||.||||||||||||
BL03937___ydf 251 ATGAAGATCACTTAATGATCGAAGGAATTGAATTAGGGGCGAAAGGATAT 300
BSNT_00932___ 301 CTGTTAAAGGATACGAGTTCAGAAACCCTTTTTCACACAATGGATGCAGC 350
||.||.||||||||.||||||||||||||||||||.||.|||||.|||||
BL03937___ydf 301 CTATTGAAGGATACAAGTTCAGAAACCCTTTTTCATACGATGGACGCAGC 350
BSNT_00932___ 351 GATCAGAGGAAATGTGCTGTTGCAGCCTGATATCCTCAAACGTCTGCAAG 400
.||.||||||||.|||||.|||||||||||||||.|.|||||||||||||
BL03937___ydf 351 AATAAGAGGAAACGTGCTATTGCAGCCTGATATCTTAAAACGTCTGCAAG 400
BSNT_00932___ 401 AAATCCAATTTGAGCGGATGAAAAAGCAGCGCAGTGAGACGCAGCTGACG 450
||||||||||.|||||||||||.||||||.|||||||.|||||||||||.
BL03937___ydf 401 AAATCCAATTGGAGCGGATGAAGAAGCAGAGCAGTGATACGCAGCTGACA 450
BSNT_00932___ 451 GAAAAGGAAGTCATTGTTCTAAAAGCAATTGCTAAAGGTCTTAAAAGCAA 500
||||||||||||||.|||||||||||||||||||||||||||||||||||
BL03937___ydf 451 GAAAAGGAAGTCATAGTTCTAAAAGCAATTGCTAAAGGTCTTAAAAGCAA 500
BSNT_00932___ 501 AGCGATTGCCTTTGATTTGGACGTCTCTGAGCGAACAGTAAAGTCCAGAT 550
||||||||||||||||||||.||||||||||.|||||||||||||.|||.
BL03937___ydf 501 AGCGATTGCCTTTGATTTGGGCGTCTCTGAGAGAACAGTAAAGTCTAGAC 550
BSNT_00932___ 551 TAACGTCCATTTACAATAAATTAGGCGCGAATTCAAGAACTGAGGCAGTA 600
|||||||||||||||||||||||||||||||||||||||||||.|||||.
BL03937___ydf 551 TAACGTCCATTTACAATAAATTAGGCGCGAATTCAAGAACTGAAGCAGTG 600
BSNT_00932___ 601 ACGATTGCCATGCAAAAAGGTATTCTGACAATAGACAACTAA 642
||||||||||||||||.|||..||||||||.||| |||||
BL03937___ydf 601 ACGATTGCCATGCAAAGAGGCGTTCTGACATTAG---ACTAA 639
#---------------------------------------
#---------------------------------------
Copyright (C) Natto Genome Project, 2009-2010. All rights reserved.