Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_05891 and BL03934
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:27:58
# Commandline: needle
# -asequence dna-align/BSNT_05891___dltA.1.5803.seq
# -bsequence dna-align/BL03934___dltA.2.5803.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_05891___dltA-BL03934___dltA.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_05891___dltA-BL03934___dltA.aln
########################################
#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_05891___dltA
# 2: BL03934___dltA
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 1622
# Identity: 1057/1622 (65.2%)
# Similarity: 1057/1622 (65.2%)
# Gaps: 223/1622 (13.7%)
# Score: 3150.0
#
#
#=======================================
BSNT_05891___ 1 ATGAAACT--TTTACATGCTATTCAAACACATGCGGAAACTTATCCGCAA 48
|||||||| ||.|.| |.|||.|||.|.|.|||.||| |.|||
BL03934___dlt 1 ATGAAACTGATTGAAA--CAATTAAAAAATACGCGCAAA------CACAA 42
BSNT_05891___ 49 ACCGAT-GCCTTCCGCT-------CTCAAGGCCAGTCGCTCACGTATCAG 90
.||||| .|||| ||| .|.|||...|...|||.||.|| |.|
BL03934___dlt 43 CCCGATACCCTT--GCTTTTGTGAATGAAGAAGAAAAGCTGACATA-CGG 89
BSNT_05891___ 91 -GAATTATGGGAGCAGTCTGACCGCGCGGC-TGCCGC---GATCCAAA-- 133
||..|.|||...||.||||| |||.| |||||| |||.||||
BL03934___dlt 90 AGAGCTTTGGTCACAATCTGA----GCGCCTTGCCGCAAGGATTCAAAGC 135
BSNT_05891___ 134 -AACGCATTTCTGGGGAAAAGA--AATCTCCTATCCTTGTGTACGGCCAC 180
|| ||.|| ||.||| ..|||||.|||.||||.|||||.||.
BL03934___dlt 136 GAA-GCTTT-------AACAGATGCTTCTCCGATCATTGTCTACGGACAT 177
BSNT_05891___ 181 ATGGAGCCGCACATGATCGTTTCCTTCTTGGGAAGTGTCAAAGCGGGACA 230
|||.|.|||...|||...|||||||||.|||...||||.|||||.||.||
BL03934___dlt 178 ATGAAACCGGTTATGGCGGTTTCCTTCCTGGCTTGTGTAAAAGCCGGGCA 227
BSNT_05891___ 231 TCCTTATATTCCGGTTGACCTGTCTATTCCGTCCGAACGGATTGCGAAAA 280
|||.||.|||||.||||||.|.||.||||||.|.||.||||||..|||||
BL03934___dlt 228 TCCGTACATTCCAGTTGACGTATCGATTCCGGCAGACCGGATTCTGAAAA 277
BSNT_05891___ 281 TTATCGAAAGCTCTGGAGCAGAATTGCTGATCCATGCAGCAGG-ACTCTC 329
|.|||.|.||.||...|||.||..|.|||.||.||....|||| ||| ||
BL03934___dlt 278 TCATCAACAGTTCAAAAGCCGAGCTTCTGCTCAATAATTCAGGCACT-TC 326
BSNT_05891___ 330 AATTGATGCAGTCAGCCAGCAGAT----TCAGACAGTTTCTGCGGAAGAA 375
..|||| || |.|.|||| ||| ||||.|..|..|||
BL03934___dlt 327 GGTTGA------CA--CGGGAGATGCCCTCA-----TTTCCGTAGTGGAA 363
BSNT_05891___ 376 C------TGCTGGAA-----------AACGAAGGCAGCTCTGTCATCCAA 408
| |.||.||| ..||.||.||| ||||..
BL03934___dlt 364 CCGGGCGTTCTTGAAGGAGACGGGGTGCCGGAGACAG-------ATCCCG 406
BSNT_05891___ 409 GATCAATGGGT---TAAGGAACACGAGACGTTTTATATCATTTACACTTC 455
|| |..||||| |..|||| ||.||.|||||.||.||.|||||.||
BL03934___dlt 407 GA-CGCTGGGTACATGGGGAA---GATACTTTTTACATTATCTACACATC 452
BSNT_05891___ 456 CGGGAGCACAGGAAATCCGAAAGGCGTGCAGATTTCCGCTGCGAATCTTC 505
|||.|||||.||||||||.|||||||||||.||.||.||.|..||.||||
BL03934___dlt 453 CGGAAGCACGGGAAATCCAAAAGGCGTGCAAATCTCAGCCGATAACCTTC 502
BSNT_05891___ 506 AAAGCTTCACAGACTGGATTTGTGCA-----GACTTTCCAGTCAGCGGA- 549
|.|||||||||||.||||| || ||||||||.|| |||
BL03934___dlt 503 AGAGCTTCACAGATTGGAT-----CACGAATGACTTTCCGGT----GGAA 543
BSNT_05891___ 550 ---GGAAAAATATTTTTAAACCAAGCACCGTTCTCATTTGATTTGTCTGT 596
||..||.|.||.|||||.|||||.|||||.||.||||||||.||.||
BL03934___dlt 544 AGCGGCCAAGTGTTCTTAAATCAAGCCCCGTTTTCCTTTGATTTATCGGT 593
BSNT_05891___ 597 CATGGACCTATATCCGTGCCTTCAATCAGGCGGGACTTTACATTG---CG 643
.||||||||.|||||||||||.||.||.||.||.||.||| || .|
BL03934___dlt 594 AATGGACCTTTATCCGTGCCTGCAGTCCGGAGGCACCTTA---TGGACGG 640
BSNT_05891___ 644 TGACAAAGGATGCTGTGAACAA---GCCGAAAGTCTTATTTGAAGAGCTG 690
|.||.||.|| ..|||..|| |||||||.|.||.|||||||..|||
BL03934___dlt 641 TTACGAAAGA---CATGATTAATCGGCCGAAACTATTGTTTGAAGCACTG 687
BSNT_05891___ 691 AAGAAGTCCGGGCTGAATGTGTGGACATCAACACCTTCCTTTGTGCAAAT 740
||..|||||....|.||.||.||||||||.||.|||||.||.|..|||||
BL03934___dlt 688 AAACAGTCCAACGTCAACGTCTGGACATCGACGCCTTCATTCGCACAAAT 737
BSNT_05891___ 741 GTGCCTGATGGATCCGGGTTTTTCACAGGATCTGCTGCCTCATGCGGA-C 789
||||.|||||||||||..||.|||..|.||.|||||.||..| ||.|| |
BL03934___dlt 738 GTGCTTGATGGATCCGTCTTATTCGGAAGAGCTGCTTCCGGA-GCTGAGC 786
BSNT_05891___ 790 ACATTTATGTTTTGCGGAGAGGTTCTTCCGGTTTCTGTGGCAAAAGCGCT 839
...||||||||.||||||||....|||||.|..||.||.||.|.| |.
BL03934___dlt 787 TTGTTTATGTTCTGCGGAGAAACGCTTCCTGCGTCAGTCGCCAGA---CA 833
BSNT_05891___ 840 GCTT---GAGCGTTTTCCGAAAGC----GAAGATTTTTAATACGTACGGC 882
|||| ||..|.|||||.||.|| | |||||||.||.||||||
BL03934___dlt 834 GCTTAAAGAAAGATTTCCAAAGGCTCGTG----TTTTTAACACATACGGC 879
BSNT_05891___ 883 CCGACTGAAGCGACAGTGGCTGTCACATCGGTTGAAATTACGGATGACGT 932
|||||.||||||||.||.||.|||||.||..|.|||.|.||.||.|||||
BL03934___dlt 880 CCGACCGAAGCGACCGTTGCCGTCACTTCCATCGAAGTAACAGACGACGT 929
BSNT_05891___ 933 CATCAGCCACAGCGAA----TCGCTTCCAGTGGGCTTC------GCC--A 970
..|.|.|.| |.| ||.|||||.||.|| ||| ||| |
BL03934___dlt 930 ATTAAACAA----GTATTCTTCTCTTCCCGTCGG-TTCTGAAAAGCCCGA 974
BSNT_05891___ 971 AACCAGATATGAACATTTTCATTATGGATGAAGA-GGGACAGCCGCTTCC 1019
|||| ||| ||..|.||.||..||||||| ||.|.||||| |||
BL03934___dlt 975 AACC------GAA-ATCGTAATCATCAATGAAGACGGAAAAGCCG--TCC 1015
BSNT_05891___ 1020 -TGATGGAGAAAAAGGAGAAATCGTCATTGCAGGGCCGAGTGTAAGCCGA 1068
.||.||.||||||||.||.|||.|.|||.|.||..|.||.||.|||..|
BL03934___dlt 1016 AAGACGGGGAAAAAGGCGAGATCATAATTACCGGAGCAAGCGTCAGCAAA 1065
BSNT_05891___ 1069 GGCTACCTTGGTGAGCCAGAGCTGACGGAAAAAGCGTTTTTCTCTCATGA 1118
|||||..|.||.||...||.|||||||||||||||||||||||||.|..|
BL03934___dlt 1066 GGCTATTTAGGCGAAAAAGCGCTGACGGAAAAAGCGTTTTTCTCTTACAA 1115
BSNT_05891___ 1119 AGG--CCAGTGGGCATACCGAACTGGCGATGCCGGCTTTATTC----AAG 1162
.|| ||..| ||.|||||.||.||.||.||.|| ||| | ||.
BL03934___dlt 1116 CGGCTCCCCT--GCTTACCGCACCGGTGACGCAGG--TTA--CAAAGAAA 1159
BSNT_05891___ 1163 ACGGTCAGATTTTCTGCCAAGGACGTTTGGATTTCCAAATTAAACTTCAC 1212
||||.|||.|.||||.||..|||.|..|.|||||||||||.|||||.|||
BL03934___dlt 1160 ACGGCCAGCTCTTCTTCCTCGGAAGACTCGATTTCCAAATCAAACTGCAC 1209
BSNT_05891___ 1213 GGCTATCGAATGGAGCTGGAGGAAATCGAGTTCCATGTCAGA-----CAG 1257
|||||.||.||.|||||.||.|||||||| ||.||||| |||
BL03934___dlt 1210 GGCTACCGGATTGAGCTTGAAGAAATCGA-----ATATCAGATCAATCAG 1254
BSNT_05891___ 1258 TCACAGTACGTTCGCTCTGCTGTCGTGATTCC-TTAT-CAGCCAAACGGA 1305
||.|..||.||.|..||.||.|||||.||||| ||.| |.||.| |||
BL03934___dlt 1255 TCCCGATATGTGCAGTCGGCAGTCGTTATTCCATTCTACCGCGA---GGA 1301
BSNT_05891___ 1306 -ACAGTTGAGTACCTGATCGC--TGCTATTGTGCCTGAGGAGCATGAGTT 1352
|.|.|.|||||.|||||||| || ||||||||||..||.||.||.||
BL03934___dlt 1302 GAAAATCGAGTATCTGATCGCCATG--ATTGTGCCTGCCGAACACGATTT 1349
BSNT_05891___ 1353 CGAGAAGGAATTCCAGCTGACAAGCGCTATTAAAAAAGAGCTT---GCCG 1399
|||.|||||||.||||.|.||.|||||.|||||.||||| || ||.|
BL03934___dlt 1350 CGAAAAGGAATACCAGTTAACCAGCGCGATTAAGAAAGA--TTTGGGCAG 1397
BSNT_05891___ 1400 CTTCTCTTCCGGCATATATGATCCCGAGAAAATTTATCTATCAGGATCAC 1449
| ...||.|||||.||||||||.|||||||||||.||.|||||..|..|.
BL03934___dlt 1398 C-AAGCTGCCGGCCTATATGATTCCGAGAAAATTCATGTATCAAAAAGAG 1446
BSNT_05891___ 1450 ATTCAAATGACGGCTAACGGCAAAATTGACCG---------AAAACGCAT 1490
||||..|||||.||.|||||.|||||.||||| ||||
BL03934___dlt 1447 ATTCCGATGACAGCAAACGGTAAAATCGACCGCAAGAGATTAAAA----- 1491
BSNT_05891___ 1491 TGGCGAAGAGGTTCTTGTATGA 1512
||||||||....||||||
BL03934___dlt 1492 ----GAAGAGGTAACCGTATGA 1509
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