Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_05892 and BL03933
See
Amino acid alignment /
Visit
BSNT_05892 in genome browser /
Return to
Orthologue table
########################################
# Program: needle
# Rundate: Mon 8 Mar 2010 06:27:58
# Commandline: needle
# -asequence dna-align/BSNT_05892___dltB.1.5803.seq
# -bsequence dna-align/BL03933___dltB.2.5803.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_05892___dltB-BL03933___dltB.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_05892___dltB-BL03933___dltB.aln
########################################
#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_05892___dltB
# 2: BL03933___dltB
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 1229
# Identity: 864/1229 (70.3%)
# Similarity: 864/1229 (70.3%)
# Gaps: 112/1229 ( 9.1%)
# Score: 2929.0
#
#
#=======================================
BSNT_05892___ 1 ATGACGCCTTACAGCTCGT---TTTTATTCTTTATACTGCTT-GGCATTC 46
|||||||||||..|.||.| ||||.|||.||||| || ||.|||.
BL03933___dlt 1 ATGACGCCTTATGGTTCATTTCTTTTCTTCATTATA----TTAGGAATTT 46
BSNT_05892___ 47 TTCTTCTGCCGACGATCATTCTCGGCTTAAACGGAAAAAGATTTCAAGC- 95
|.||...||||||.|||||||||||..|.|||||||||||.||.| ||
BL03933___dlt 47 TACTGGCGCCGACCATCATTCTCGGACTGAACGGAAAAAGCTTCC--GCT 94
BSNT_05892___ 96 -ATACAACATG-----TTCATATCT--ATCATTATATTGGCTTTAATTTT 137
|||.||.||| |||...||| .|| ||||..|.|||||
BL03933___dlt 95 TATATAATATGGCGGTTTCCGTTCTGGTTC-------TGGCGCTTATTTT 137
BSNT_05892___ 138 TTCGCACGACTTACACGGGGTCATCGCGCTGTGCCTGTTTACAATATGGC 187
||||.||..|.|.||||||.|.|||..|||||||||||||||..|.||||
BL03933___dlt 138 TTCGAACAGCCTGCACGGGCTGATCATGCTGTGCCTGTTTACGCTTTGGC 187
BSNT_05892___ 188 AGGTGCTCCTGATCAGCGGCTATCTGGCATACCGGCAGAAAGCGAACAGC 237
||..|.|.|||||||..||||||.|.||.|||||.|..||||||||||||
BL03933___dlt 188 AGACGGTTCTGATCAAAGGCTATATCGCTTACCGTCTAAAAGCGAACAGC 237
BSNT_05892___ 238 GGCTTTGTCTTTTGCGGGGCTGTTATC-GCGTCTATTCTGCCTTTATTTC 286
|||.|.||.|||||...||||| .|.| ||.|||||.||||| ||
BL03933___dlt 238 GGCATCGTATTTTGTCTGGCTG-CAGCAGCTTCTATCCTGCC------TC 280
BSNT_05892___ 287 TGTCAAAAATATGGCCGTTTCTGTCACACCCGCAGCCGCATCATCCGCCG 336
||.|| ||||||.|.|.||.|||| |..|.|||||
BL03933___dlt 281 TGGCA---------------CTGTCAAAGCTGCTGCCG--TTTTTCGCCG 313
BSNT_05892___ 337 CATAAC--CTGATCAGC-TTTTTAGGGATTTCATATTTAACCTTTAAAGG 383
.|.|| |||..||.| |||.|.||.||.||.||||||||.||||||||
BL03933___dlt 314 -TTGACAACTGGGCAACATTTCTCGGAATCTCGTATTTAACTTTTAAAGG 362
BSNT_05892___ 384 CGTTCAGCTGATTATGGAAGCAAGAGACGGACTGCTGAAAGAACAGCTGC 433
.||||||||.||.||.|||.|..|.|||||.||..|.|||.|.|||||.|
BL03933___dlt 363 GGTTCAGCTCATCATTGAAACCCGCGACGGTCTCATTAAAAAGCAGCTCC 412
BSNT_05892___ 434 CATT--GCACCGCCTGCTGTATTTCATCCTGTTTTTCCCGACGATTTCCT 481
||.| ||| |.|||||.||.||.||.||.|||||.||.||.||.||.|
BL03933___dlt 413 CAATCAGCA--GACTGCTTTACTTTATTCTCTTTTTTCCAACCATCTCGT 460
BSNT_05892___ 482 CCGGCCCGATCGACAGATACCGCCGGTTCGTCAAGGATGAACAGAAGGCT 531
|.||.|||||||||||.||||||||.||.|..||.||.||.||||.||.|
BL03933___dlt 461 CAGGTCCGATCGACAGGTACCGCCGTTTTGAAAAAGACGATCAGACGGTT 510
BSNT_05892___ 532 TGGACGAAAGAAG-AATACGCCGACCTGTTGTATACGGGAATCCATAAAA 580
||||| ||||.|| ||||||..||.|||.|.||.|..||||||.||||||
BL03933___dlt 511 TGGAC-AAAGGAGCAATACGAAGAACTGCTTTACAAAGGAATCAATAAAA 559
BSNT_05892___ 581 TCTTCATCGGTTTCCTGTATAAATTTATTATCGGCTAC-GCGATCAATAC 629
|.||..||||.||..||||.|||||.|||||||||||| || ||.|||||
BL03933___dlt 560 TTTTTCTCGGCTTTTTGTACAAATTCATTATCGGCTACTGC-ATTAATAC 608
BSNT_05892___ 630 GTACTTCATCATGAA-------------TCTTCCCGCA--ATCACGCACA 664
|||..||||.||||| .|||||.||| .||.||||
BL03933___dlt 609 GTATGTCATAATGAAACTGCCGTTTTTGACTTCCGGCAGCTTCTCGCA-- 656
BSNT_05892___ 665 ATAAGATTCTTGGGAACCTGCTGTACATGTACGGCTACAGCATGTATTTA 714
..|||| ||.| ||||||||.|..||||||.|.|||.|.
BL03933___dlt 657 --TGGATT----GGCA-------TACATGTATGCGTACAGCCTTTATCTG 693
BSNT_05892___ 715 TTCTTTGATTTCGCCGGCTACACGATGTTTGCCGTCGGGGTCAGCTACAT 764
||.||||||||||||||.||||||...|||||.|||||.||||||||.||
BL03933___dlt 694 TTTTTTGATTTCGCCGGATACACGGCTTTTGCGGTCGGCGTCAGCTATAT 743
BSNT_05892___ 765 TATGGGCATTAAATCACCGGAAAACTTTAATAAACCATTTATCAGTAAAA 814
.|||||.||.|||||.||.||||||||||||||.||.||.|||||....|
BL03933___dlt 744 CATGGGAATCAAATCCCCTGAAAACTTTAATAAGCCGTTCATCAGCCGCA 793
BSNT_05892___ 815 ATATTAAAGATTTCTGGAATCGCTGGCATATGTCTCTGTCATTTTGGTTC 864
|||||||||||||||||||.||||||||||||||.||.||.||.||||||
BL03933___dlt 794 ATATTAAAGATTTCTGGAACCGCTGGCATATGTCGCTTTCCTTCTGGTTC 843
BSNT_05892___ 865 AGAGATTATGTGTTTATGAGATTCGTATTTTGGATGACTAAGAAAAAGTG 914
|||||.||.||.||.|||.|.||.||..||||||||||.||||||||.||
BL03933___dlt 844 AGAGACTACGTCTTCATGCGCTTTGTCCTTTGGATGACGAAGAAAAAATG 893
BSNT_05892___ 915 GATCAAAAACCGTATGGCCGTCTCAAACATCGGGTATTTCCTGCTGTTTA 964
|||||.||||||.|||||.||.||.||.|||||.|||.|.||||||||..
BL03933___dlt 894 GATCACAAACCGGATGGCTGTTTCCAATATCGGATATGTGCTGCTGTTCC 943
BSNT_05892___ 965 TGCTGATGGGGGTTTGGCACGGGCTTGCGCCGCAATATATCATTTACGGC 1014
|.||||||||.||.||||||||.|||||.||.||.||.|||.|.|||||.
BL03933___dlt 944 TTCTGATGGGCGTCTGGCACGGCCTTGCCCCTCAGTACATCGTCTACGGG 993
BSNT_05892___ 1015 CTCTATCACGCCGTTCTGATGACGT--GTTACAACTTTTTCGAGAAGTGG 1062
||.||||||||..|.||.||| || |.|..|||||.||.||.||.|||
BL03933___dlt 994 CTGTATCACGCGCTGCTCATG--GTCGGCTTTAACTTCTTTGAAAAATGG 1041
BSNT_05892___ 1063 AATAAGAAATATAAATGGCTGCCGTCCAACCGCTGGACAAC--CATTCTC 1110
||||||||..|.||.|||..||||..||||...|||||.|| |..|||
BL03933___dlt 1042 AATAAGAAGCACAAGTGGTGGCCGAACAACAAGTGGACGACAGCCGTCT- 1090
BSNT_05892___ 1111 GCTATTGTGATCACATTCCATTTCGTTTGCTTCGGGTTTTATATTTTCTC 1160
|.||||||.|.||.|||||.||.||.||.||.||.||||..||||||||
BL03933___dlt 1091 -CAATTGTGGTGACCTTCCACTTTGTATGTTTTGGATTTTTAATTTTCTC 1139
BSNT_05892___ 1161 AGGAAAACCATTTCAT-CACCACCATTAA 1188
|||.|||| |.|| ||| |||
BL03933___dlt 1140 AGGGAAAC----TAATACAC------TAA 1158
#---------------------------------------
#---------------------------------------
Copyright (C) Natto Genome Project, 2009-2010. All rights reserved.