Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_05680 and BL03928
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:27:47
# Commandline: needle
# -asequence dna-align/BSNT_05680___acdA.1.5803.seq
# -bsequence dna-align/BL03928___acdA.2.5803.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_05680___acdA-BL03928___acdA.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_05680___acdA-BL03928___acdA.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_05680___acdA
# 2: BL03928___acdA
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 1163
# Identity: 876/1163 (75.3%)
# Similarity: 876/1163 (75.3%)
# Gaps: 46/1163 ( 4.0%)
# Score: 3186.0
#
#
#=======================================
BSNT_05680___ 1 ATGAATTTTTCATTA---TCA--GAAGAACACCAGATGATAC-GAAAATT 44
|||| ||.||| |.| |||||.|||||.||||||| |||.| |
BL03928___acd 1 ATGA-----TCTTTAAGCTGAGCGAAGAGCACCAAATGATACAGAAGA-T 44
BSNT_05680___ 45 GGTGCGCGATTTTGCGAAGCATGAGGTGGCCCCGACAGCGGCAGAACGGG 94
|||||||||.|||||..|.||.|||||||..|||||.|||..|||.||||
BL03928___acd 45 GGTGCGCGACTTTGCCCATCACGAGGTGGAGCCGACTGCGAAAGAGCGGG 94
BSNT_05680___ 95 ACGAACAAGAACGCTTCGATCGCGAGCTGTTTCGGGAAATGGC-TAATCT 143
|.||..||||.||.||.||....||.||||||....||||||| .||| |
BL03928___acd 95 ATGAGGAAGAGCGGTTTGACATGGAACTGTTTGCAAAAATGGCGGAAT-T 143
BSNT_05680___ 144 GGGGCTGACGGGAATTCCATGGCCTGAAGATTACGGCGGAATCGGAAGTG 193
||||||.|||||.||.||.|||||.||.||.|||||.||||||||.||.|
BL03928___acd 144 GGGGCTCACGGGTATACCGTGGCCAGAGGAATACGGGGGAATCGGCAGCG 193
BSNT_05680___ 194 ACTATTTGGCCTACGTCATCGCGGTGGAGGAGCTGTCAAAAGTGTGCGCC 243
|||||.|.|||||||||||||||||.||.|||||.||.|||||.||||||
BL03928___acd 194 ACTATCTCGCCTACGTCATCGCGGTTGAAGAGCTTTCGAAAGTCTGCGCC 243
BSNT_05680___ 244 TCCACCGGAGTGACGCTT-TCAGCCCATATCTCTCTTTGC-AGCTGGCCG 291
||.||.||.||.|| ||| ||.|||||||..||.| |||| .||||||||
BL03928___acd 244 TCAACGGGTGTCAC-CTTGTCTGCCCATACATCGC-TTGCGGGCTGGCCG 291
BSNT_05680___ 292 CTGTTTGCCTTTGGGACGGAGGAACAGAAGACA-GAGTACTTAACACAAC 340
.|.|.|||.|||||.||.||.|||||||| ||| ||.||.||||..|...
BL03928___acd 292 ATTTATGCATTTGGAACAGAAGAACAGAA-ACAGGAATATTTAAAGCCGA 340
BSNT_05680___ 341 TGGCCCTCGGAGAGAAAATCGGCGCATTCGCATTGACCGAAGCACGG-TC 389
||||||.|||.||.||.||.||.||.|.||.||||| ||.|||.||| ||
BL03928___acd 341 TGGCCCGCGGCGAAAAGATAGGAGCCTACGGATTGA-CGGAGCCCGGTTC 389
BSNT_05680___ 390 TGGATCTGACGCCGGCAGCATGAAAACAACTGCTGAACGAATCGGCGATG 439
.||.||.||.||||||.||||||||||.||.||.|||..||..|||||||
BL03928___acd 390 AGGCTCCGATGCCGGCGGCATGAAAACGACCGCAGAAAAAAAAGGCGATG 439
BSNT_05680___ 440 ACTATGTGTTAAATGGTTCCAAAGTGTTTATCACAAACGGCGGCGTTGCT 489
|.|||.|.||.||.||..|.||..|.|||||||||||||||||..|.||.
BL03928___acd 440 AATATATTTTGAACGGGACGAAGATCTTTATCACAAACGGCGGAATCGCG 489
BSNT_05680___ 490 GATATTTACATTGTTTTTGCCGTCACCGATCCCGAGAAAAAGAAA---AA 536
||..|.|||||.||.||||| ||.|..|.||..|.||.||||| ||
BL03928___acd 490 GACTTCTACATCGTGTTTGC---CAACCTTGCCCCGGAACAGAAACACAA 536
BSNT_05680___ 537 AGGCATTACCGCTTTTATAGTAGAAAAGGATTTTGAAGGATTTTTTACAG 586
|||||..|||||.|||||.||.||||||||.||....||.||||.|...|
BL03928___acd 537 AGGCACAACCGCCTTTATCGTTGAAAAGGACTTCCCCGGCTTTTCTGTCG 586
BSNT_05680___ 587 GCAAGAAAGAAAAGAAGCTGGGCATCCGTTCTTCACCGACAACGGAAATC 636
|.||.|||||.|.|||.||||||||||||||.|||||||||||.||||||
BL03928___acd 587 GAAAAAAAGAGAGGAAACTGGGCATCCGTTCATCACCGACAACCGAAATC 636
BSNT_05680___ 637 ATGTTCGAAGATTGTGTAGTGCCCGCATCAAAGCGTCTCGGACAAGAAGG 686
||.||..|.||.||....|||||...|..|||.||.||.||....|||||
BL03928___acd 637 ATCTTTCAGGACTGCCGCGTGCCTTTAAAAAACCGCCTTGGCGGGGAAGG 686
BSNT_05680___ 687 AGAAGGCTTCAAAATCGCGATGAAGACGCTTGACGGAGGCAGAAACGGCA 736
.||||||||.||||||||||||||||||||.||.||||||||||||||.|
BL03928___acd 687 TGAAGGCTTTAAAATCGCGATGAAGACGCTCGATGGAGGCAGAAACGGAA 736
BSNT_05680___ 737 TAGCTGCACAAGCCGTAGGCATCGCCCAAGGAGCGCTTGATGCGGCGCTT 786
|.||.||.||||||||.||.||.|||||.||.||..||||.||||||
BL03928___acd 737 TTGCCGCTCAAGCCGTCGGGATTGCCCAGGGCGCATTTGAGGCGGCG--- 783
BSNT_05680___ 787 CAA----TATGCAAAAGAGCGAAAGCAATTCGGAAAATCGATCGGCGAGC 832
|| |||||.||||||||.|||||||||||.|...||||||.|||||
BL03928___acd 784 -AAGGCGTATGCGAAAGAGCGGAAGCAATTCGGCAGGCCGATCGCCGAGC 832
BSNT_05680___ 833 AGCAGGGCATCGCTTTTAAACTCGCGGATATGGCGACAATGATAGAAGCT 882
||||||||||||||||||||||.||.|||||||||||...|||.||||||
BL03928___acd 833 AGCAGGGCATCGCTTTTAAACTGGCTGATATGGCGACGGAGATTGAAGCT 882
BSNT_05680___ 883 TCAAGGCTATTGACCTATCAGGCTGCGTGGTTAGAATCATCGGGCCTTCC 932
||||||||.||.|||||.|||||.||.|||.|.||||||...||.||.||
BL03928___acd 883 TCAAGGCTTTTAACCTACCAGGCGGCATGGCTGGAATCAGAAGGACTGCC 932
BSNT_05680___ 933 ATATGGAAAAGCTTCCGCTATGTCCAAACTGATGGCTGGGGATACGGCGA 982
.||||||||.|||||.||.|||||.||.||....||.|||||||||||.|
BL03928___acd 933 TTATGGAAAGGCTTCTGCCATGTCAAAGCTTTACGCAGGGGATACGGCCA 982
BSNT_05680___ 983 TGAAGGTAACGACCGAAGCCGTGCAGATTTTCGGCGGCTACGGCTATACA 1032
||||.||.|||||.||.||||||||.||.||||||||.||||||||.|||
BL03928___acd 983 TGAAAGTGACGACGGAGGCCGTGCAAATATTCGGCGGGTACGGCTACACA 1032
BSNT_05680___ 1033 AAAGATTATCCGGTAGAACGCTATATGCGTGATGCAAAAATCACGCAAAT 1082
||.|||||||||||.||.||||.||||||.||||||||||||||.||.||
BL03928___acd 1033 AAGGATTATCCGGTCGAGCGCTTTATGCGCGATGCAAAAATCACACAGAT 1082
BSNT_05680___ 1083 CTATGAAGGCACTCAAGAAATTCA-AAGACTGGTCATCTCCAGAATGCTC 1131
|||||||||.||.||.|||||||| ||| ||.|||||.||.||||||||
BL03928___acd 1083 CTATGAAGGTACGCAGGAAATTCAGAAG-CTCGTCATTTCGAGAATGCT- 1130
BSNT_05680___ 1132 GCGGATTAA---- 1140
|||.||
BL03928___acd 1131 ---GATGAAATAA 1140
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