Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_03596 and BL03926
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:25:36
# Commandline: needle
# -asequence dna-align/BSNT_03596.1.5803.seq
# -bsequence dna-align/BL03926___mmgB.2.5803.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_03596-BL03926___mmgB.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_03596-BL03926___mmgB.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_03596
# 2: BL03926___mmgB
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 961
# Identity: 579/961 (60.2%)
# Similarity: 579/961 (60.2%)
# Gaps: 194/961 (20.2%)
# Score: 1485.5
#
#
#=======================================
BSNT_03596 1 ATGGAAATCAA-ACA-AATCATGGT-AGCTGGCGCAGGTCAGATGGGAAG 47
|||.||| || ||| .|||||||| |.| ||.||.||.||||||||...
BL03926___mmg 1 ATGAAAA--AAGACACGATCATGGTCATC-GGAGCCGGCCAGATGGGGTC 47
BSNT_03596 48 CGGAATTGCTCAAACAG----CTGCCGACGCAGGCTTTTATGTGCGGATG 93
|||.||.||| ||| |||||.|.||.||.|...||||....|||
BL03926___mmg 48 CGGGATCGCT----CAGGTCTCTGCCCAGGCCGGATACAATGTTTACATG 93
BSNT_03596 94 TATGATGTGAAT--CCAGAGGCCGCGGAGGCAGGATTGAAACGGCTGAAG 141
|||||.|| || ||.|| .|| .||||||| |||
BL03926___mmg 94 TATGACGT--ATCACCTGA----------ACA-AATTGAAA------AAG 124
BSNT_03596 142 AAA--CAGCTGGC----CCGTGATGC-------TGAGAAA---GGAAAAA 175
.|| .||| || ||| || |.|||.| |||||||
BL03926___mmg 125 GAATGAAGC--GCATTTCCG----GCCAGCTTTTCAGACAGGCGGAAAAA 168
BSNT_03596 176 GGACCGAGACG---------GAAGTGAAG-AGCGTAAT----CAGCCGCA 211
|| |.||..| ||.|||||| | ||| ||| |||.
BL03926___mmg 169 GG--CAAGCTGCCGCATGAAGATGTGAAGCA----AATCTACCAG-CGCC 211
BSNT_03596 212 TTTC-------GATTTCTCAAACGCTTGAGGAGGCAGAGCATGCGGACA- 253
|||| |.| .||||.||.||.|| ||||..|
BL03926___mmg 212 TTTCTCCGTCGGCT-------GCGCTCGACGAAGC-------GCGGGAAG 247
BSNT_03596 254 ------TTGTGATTGA---GGCTATCGCAGAAAACATGGCGGCAAAAACT 294
|..|.||||| |||| |..|||.|.||||..|.|||||..
BL03926___mmg 248 CTTTTCTCATCATTGAAGCGGCT---GTTGAACAAATGGACGTAAAAAAA 294
BSNT_03596 295 GAGATGTTTAAAACA-----CTTGATCGCATTTGCCC---GCCTCATACG 336
||.||.|| || |||||| .|..||.|| |.|||| .||
BL03926___mmg 295 GACATTTT-----CACGCGGCTTGAT--GAAGTGACCGAAGACTCA-GCG 336
BSNT_03596 337 ATTTTGGC--CAGCAATACATCTTCCTTGCCTATTACAGAAATCGCTGCT 384
||.||||| || ||||||||.|||.||.|.|||||.|||.|.|||||.
BL03926___mmg 337 ATATTGGCATCA--AATACATCGTCCCTGTCGATTACGGAACTTGCTGCC 384
BSNT_03596 385 GTAACAAACCGGCCTCAACGGGTTATTGGCATGCATTTTATGAATCCCGT 434
||.|||||....||||||...||.||.|||||||||||||||||.||.||
BL03926___mmg 385 GTCACAAAAAAACCTCAAAACGTCATCGGCATGCATTTTATGAACCCGGT 434
BSNT_03596 435 CCCTGTAATGAAGCTGGTTGAAGTGATTC--GCGGCTT---------GGC 473
.||.||.|||.||||.||.|||||.| || |.||||| |||
BL03926___mmg 435 TCCCGTCATGCAGCTTGTCGAAGTCA-TCAGGGGGCTTGAGACGAGCGGC 483
BSNT_03596 474 TACATCAGAAGAAACGGCCTTAGATGTTATGGCATTAGCGGAAAAGATGG 523
.| |.||.|.||||| .||..||||....|||||...||||
BL03926___mmg 484 GA-AACATATGAAAC---------CGTCGTGGCTGCGGCGGAGCGGATG- 522
BSNT_03596 524 GGAAAACA-----GCGGTAGAAGTCAATGATTTTCCTGGGTTTGTTTCCA 568
|||| .||.||||.||....|||||.||.||.|||.|.||||
BL03926___mmg 523 ----AACAAGGTTCCGATAGAGGTGCGGGATTTCCCGGGATTTATCTCCA 568
BSNT_03596 569 ACCGTGTGCTTCTT----CCAATGATTAATGAAGCCATCTATTGC-GTGT 613
||| ||.|||| ||.|||||||||||.||..| |.|||| .|.|
BL03926___mmg 569 ACC----GCATCTTAATGCCGATGATTAATGAGGCGGT-TTTTGCACTTT 613
BSNT_03596 614 ATGAGGGAGTGGC---GAAGCCGGAGGCAATAGATGAAGTGATGAAGCTG 660
||||.||..|.|| ||| .|.|.|| |||||.|.|.|.||||||||.
BL03926___mmg 614 ATGAAGGCATCGCCGAGAA--AGAAAGC-ATAGACGGAATCATGAAGCTT 660
BSNT_03596 661 GGCATGAATCATCCGATGGGTCCGCTTGCATTAGCGGATTTTATCGGACT 710
||||||||.|||||||||||.|||.|.||..|.||.|||.|.|||||.||
BL03926___mmg 661 GGCATGAACCATCCGATGGGCCCGTTGGCTCTCGCCGATCTGATCGGTCT 710
BSNT_03596 711 GGATACGTGTTTATCAATTATGGAAGTC-CTTCACTCAGGCCTTGGCGAT 759
||||||||||.|.|..||||||| ||.| ||.||...||||.|||||||.
BL03926___mmg 711 GGATACGTGTCTGTATATTATGG-AGACGCTGCATGAAGGCTTTGGCGAC 759
BSNT_03596 760 TCCAAATACCGTCCTTGCCCGCTGCT----CCGCAAGTATGTCAAAGCAG 805
...||.|||.|.|||||.|||||.|| | |.|||||||..||||
BL03926___mmg 760 GATAAGTACAGGCCTTGTCCGCTCCTTAAAC----AATATGTCAGCGCAG 805
BSNT_03596 806 GCTGGCTTGGCAAAAAGAGCGGAC-GCGGTTTTTATGAC-TATGAGGAGA 853
|..|.||.|| |||.|.|.|||.| |.||.|||||| || |||||..||.
BL03926___mmg 806 GACGACTCGG-AAAGAAAACGGGCAGAGGGTTTTAT-ACGTATGAAAAGC 853
BSNT_03596 854 AGACTTCCTGA 864
||.|..|.|.|
BL03926___mmg 854 AGCCGACATAA 864
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