Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_03598 and BL03925
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:25:36
# Commandline: needle
# -asequence dna-align/BSNT_03598___mmgA.1.5803.seq
# -bsequence dna-align/BL03925___mmgA.2.5803.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_03598___mmgA-BL03925___mmgA.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_03598___mmgA-BL03925___mmgA.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_03598___mmgA
# 2: BL03925___mmgA
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 1292
# Identity: 783/1292 (60.6%)
# Similarity: 783/1292 (60.6%)
# Gaps: 223/1292 (17.3%)
# Score: 2023.5
#
#
#=======================================
BSNT_03598___ 1 ATGAGGAAAACAGTCATTGTAAGTGCTGCAAGAACGCCATTTGGCAAATT 50
.||..||.|.||||.||||.|.|.|..|||.|.|||||.|||||.|||.|
BL03925___mmg 1 GTGGCGAGATCAGTTATTGCAGGCGGCGCACGCACGCCTTTTGGAAAACT 50
BSNT_03598___ 51 CGGCGGAG-----TATTGAAAGAGGTGAAAGCTGCTGAGCTTGGGGGCAT 95
|||.||.| .|.|.|||||.| |||||.|||||.||.||.||
BL03925___mmg 51 CGGGGGCGCGCTTCAGTCAAAGACG-----GCTGCGGAGCTCGGCGGAAT 95
BSNT_03598___ 96 GGTGATGAAGGAGGCGCTGCAACGGGCTGGAGT-----CTCTGGAGATGA 140
.|...|.||.|||||..|..||||..|.||.|| || ||.||
BL03925___mmg 96 CGCCGTAAAAGAGGCATTAAAACGTTCCGGTGTAAATCCT-----GAGGA 140
BSNT_03598___ 141 TGTAGAAGGAAACGTCATGGGCATGGTTGTCCAGGCCGGCTCA-GGGCAG 189
|||.||.|.|..|.||||||||...||..|.||.|.||| .|| ||||||
BL03925___mmg 141 TGTCGATGAAGTCATCATGGGCTCCGTACTTCAAGGCGG-ACAGGGGCAG 189
BSNT_03598___ 190 ATACCTTCCCGTCAAGCTGCCCGTCTGGCGGGAATGCCTTGGAGTGTGCC 239
.|.||.||..|.||.||.||.|||.|.||||||.|.|| |||.|.|
BL03925___mmg 190 CTGCCGTCGAGGCAGGCCGCGCGTTTTGCGGGACTCCC-----GTGGGAC 234
BSNT_03598___ 240 GTCA-----GAAACACTGAATAAAGTCTGTGCTTCCGGCCTT-----CGC 279
|||| |||||..|.||||||||.||.|||||.|| || .||
BL03925___mmg 235 GTCAAAACGGAAACGATTAATAAAGTGTGCGCTTCAGG--TTTAAGAAGC 282
BSNT_03598___ 280 GCTGTCACTTTATG--TGATCAAATGATTCGGGCGCAG-GATGCGGACAT 326
||||| .||| .|||||.||.||..|||| |.| ||||||||..|
BL03925___mmg 283 ---GTCAC--AATGGCGGATCAGATCATCAGGGC-CGGTGATGCGGAGGT 326
BSNT_03598___ 327 ACTTGTTGCGGGGGGGATGGAAAGCATGAGCAA--------TATTCCGTA 368
..|||..||.||.||.||||||...||| .||| ||||
BL03925___mmg 327 CATTGCCGCCGGAGGTATGGAATCGATG-TCAAACGCCCCTTATT----- 370
BSNT_03598___ 369 TGCCGTTCCCGCCGGGCGCTGGGGAGC--ACGGATGGGGGACGGCGAGCT 416
||| |||.....|.|.|.||||| || | |||||||.|||||.|.|.|
BL03925___mmg 371 TGC--TTCAAAAAGCGAGGTGGGG-GCTGA-GGATGGGAGACGGGGCGGT 416
BSNT_03598___ 417 TAGGGACTTAATGGTGTAT----GACGGATTAACGTGCGCATTTGACGAG 462
||..||.||.||| || |||||..|.||.|||.||||| |||.|
BL03925___mmg 417 TAAAGATTTGATG----ATCGCAGACGGGCTGACATGCTCATTT-ACGGG 461
BSNT_03598___ 463 -GTGCACATGGCTGTTC--ACGGAAATACAGCTGCCAAGGAATATGCA-A 508
||.||||||| |.|| ||||||||.|.|||||.||.||.| ||.| |
BL03925___mmg 462 CGTTCACATGG--GCTCCTACGGAAATGCCGCTGCGAAAGAGT-TGGAGA 508
BSNT_03598___ 509 T--CTCACGAAGAGAGCAGGA-CGAATGGGCGTTGAGAAGTCATGCAAGG 555
| ||...|| ||||||||| || .||||||.|.||.||.|| ||.|.
BL03925___mmg 509 TTGCTAGGGA--AGAGCAGGATCG-GTGGGCGCTCAGGAGCCA--CATGC 553
BSNT_03598___ 556 GCAGC--TA-AGGCCGCCGATGAAGGGAAGTTTCAGGATGAA---ATTGT 599
| ||| || |.||.||.|||..|||...|.| |||| ||| ||.||
BL03925___mmg 554 G-AGCCGTACACGCTGCGGATTCAGGCGCGCT--AGGA-GAAGAGATCGT 599
BSNT_03598___ 600 TCCCGTCAACTGGATCGGTC--GAAAAG---------GAAAACCAAACGT 638
.||.|||| |.||| | ||.||| ||| ..||||
BL03925___mmg 600 CCCGGTCA---GCATC---CAAGAGAAGCGGGACGGCGAA---TTAACG- 639
BSNT_03598___ 639 TGTTGATAAAGATGAAGCGATTCGCCGTGACACAAGTC--TGGATCAGCT 686
||.|||.||||||||||....||.||.||||| ||| ||||...|||
BL03925___mmg 640 -GTCGATCAAGATGAAGCACCGCGGCGCGACAC--GTCAATGGAAAGGCT 686
BSNT_03598___ 687 CGCGAAACTTGCTCCGATTTATG--CAAGTGACGGTTCTATCACAGCCGG 734
..|.||.|||||.|||.|||.|| || |.|.||..|.||.||.||.||
BL03925___mmg 687 GTCAAAGCTTGCCCCGGTTTTTGACCA--TAATGGGACAATTACGGCGGG 734
BSNT_03598___ 735 CAATGCTCCTGGAGTCAATGACGGAGCCGGCGCGTTCGTGCTGATGTCTG 784
.||.||.||.||.||.|||||.||.||..||.|..|..|..|||||..||
BL03925___mmg 735 AAACGCGCCGGGGGTAAATGATGGGGCATGCTCACTTATCGTGATGAATG 784
BSNT_03598___ 785 AGGAAAAAGCTGCTGAGCTTGGCAAACGGCCTCTGGCTACAATTCTTGGT 834
|.||.|| ||||||.|..|| ||||
BL03925___mmg 785 AAGACAA-------------GGCAAAGGAACT-------CAAT------- 807
BSNT_03598___ 835 TTTTCAACTACGGGAATGC--------------CAGCGCACGA------- 863
|.|||.|| .||||||| |
BL03925___mmg 808 -----------GTGAAGGCGCCGGCCGTCATTAAAGCGCAC-ACATCAAT 845
BSNT_03598___ 864 -GCTGGCG--GC---------------AGCGCCGGGGTTTGCCATTA-AC 894
||.|.|| || |.|.||.|||.|||.|||.| |.
BL03925___mmg 846 TGCAGTCGAAGCAAAAGACTTTCCGAAAACCCCCGGGCTTGTCATCAGAG 895
BSNT_03598___ 895 AAGCTCCTGAAAAAGAACG---GTTTAACTGTCCAAGATATTGACTTGTT 941
|| ||.||.||.|| |||| |.|.|.||.|| .|||||..|..||||
BL03925___mmg 896 AA-CTGCTTAACAA-AACGGGAGCTGAGCTTTC--TGATATCAAACTGTT 941
BSNT_03598___ 942 TGAAGTAAATGAAGCTTTTGCTTCAGTTGTTTTGACATGTGAAAAAATCG 991
||||.|.|||||||||||.|||.|.||||.||||.||.|.|.|||.||||
BL03925___mmg 942 TGAAATCAATGAAGCTTTCGCTGCGGTTGCTTTGGCAAGCGGAAAGATCG 991
BSNT_03598___ 992 TAGGTTTCGATCTTGAAAAAGTAAATGTAAATGGCGGTGCGATCGCGCTC 1041
..|||.|.||..|.||.||.||.|||||.||.|||||.||.||.|||.||
BL03925___mmg 992 CGGGTCTTGACATGGAGAAGGTCAATGTCAACGGCGGCGCCATTGCGATC 1041
BSNT_03598___ 1042 GGACACCCGATCGGCGCGAGCGGTGCGAGAATTCTCATGACGCTTGTTTA 1091
||.||.|||||||||||||||||.||.|||||..|..|.||||||.|.||
BL03925___mmg 1042 GGCCATCCGATCGGCGCGAGCGGAGCAAGAATCATTTTAACGCTTATGTA 1091
BSNT_03598___ 1092 TGAATTAAAGCGACGAGGAGGGGGTCTGGGCGTTGCCGCTATTTGCAGCG 1141
.||||||||.||.||.||.||.|||.|.||..||||.||.||||||||||
BL03925___mmg 1092 CGAATTAAAACGGCGCGGCGGCGGTATAGGGATTGCTGCCATTTGCAGCG 1141
BSNT_03598___ 1142 G-GGCAGCACAGGGAGACGCCGTCTTAGTGCAGGTTCATTAA 1182
| |||.|| ||||||||||||||..|..|..|||| ||.|
BL03925___mmg 1142 GCGGCGGC-CAGGGAGACGCCGTGATGATCGAGGT--ATAA- 1179
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