Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_05709 and BL03923
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:27:49
# Commandline: needle
# -asequence dna-align/BSNT_05709___argS.1.5803.seq
# -bsequence dna-align/BL03923___argS.2.5803.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_05709___argS-BL03923___argS.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_05709___argS-BL03923___argS.aln
########################################
#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_05709___argS
# 2: BL03923___argS
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 1696
# Identity: 1320/1696 (77.8%)
# Similarity: 1320/1696 (77.8%)
# Gaps: 50/1696 ( 2.9%)
# Score: 5185.5
#
#
#=======================================
BSNT_05709___ 1 ATGAACATTGCGGAACAAATGAAGGACGTGCTGAAAGAAGAAATCAAAGC 50
||||||||.|..|||||||||||.||.||||||||..|.|||||.||.|.
BL03923___arg 1 ATGAACATAGTCGAACAAATGAAAGATGTGCTGAAGCAGGAAATTAAGGA 50
BSNT_05709___ 51 GGCCGTTCTGAAAGCGGGACTGGCTGAAGAAAGCCAGATTCCCAATGTTG 100
.||.||..|||||||.||.||.||.|||||||||.|||||||..|.||.|
BL03923___arg 51 AGCTGTCATGAAAGCCGGCCTCGCCGAAGAAAGCGAGATTCCAGAAGTCG 100
BSNT_05709___ 101 TTTTAGAAACACCGAAAGATAAAACACACGGCGACTACTCAACGAATATG 150
|..|.|||...||||||||.||..|.||.||||||||.||.||.||||||
BL03923___arg 101 TACTGGAAGTTCCGAAAGACAAGTCGCATGGCGACTATTCCACTAATATG 150
BSNT_05709___ 151 GCGATGCAGCTGGCAAGAGTGGCAAAAAAAGCGCCGCGCCAAATCGCTGA 200
||.|||||||||||.|||.|.||.||||||||||||||..|.||.||.||
BL03923___arg 151 GCTATGCAGCTGGCGAGAATCGCCAAAAAAGCGCCGCGGAATATTGCCGA 200
BSNT_05709___ 201 AGAGATTGTCGCCCAT--TTTGATAAAGGAAAGGCTTCGATTGAAAAACT 248
|||.||.|||| ||| |||||.||||||||.||.|||||.||.|||||
BL03923___arg 201 AGAAATCGTCG--CATCCTTTGACAAAGGAAAAGCGTCGATCGACAAACT 248
BSNT_05709___ 249 GGATATCGCCGGCCCGGGTTTTATCAATTTCTATATGAACAATCAATATT 298
.||||||||.||.||.||.||||||||||||||.||||||||||||||||
BL03923___arg 249 TGATATCGCAGGACCTGGCTTTATCAATTTCTACATGAACAATCAATATT 298
BSNT_05709___ 299 TAACAAAGCTGATTCCGTCTGTACTGGAAGCAGGGGAAGCATACGGGGAA 348
||||.||||||||||||.||||.||.||||||||.||.||.|||||.|||
BL03923___arg 299 TAACGAAGCTGATTCCGGCTGTGCTTGAAGCAGGAGAGGCCTACGGTGAA 348
BSNT_05709___ 349 ACGAACATCGGAAACGGTGAACGAGTTCAGGTAGAATTCGTATCAGCGAA 398
||.||.|||||...|||.|||||.||.|||||.||||||||.|||||.||
BL03923___arg 349 ACAAATATCGGGGGCGGGGAACGCGTCCAGGTGGAATTCGTCTCAGCAAA 398
BSNT_05709___ 399 TCCGACGGGAGACCTTCACCTCGGGCATGCGCGCGGGGCGGCTGTCGGCG 448
.||||||||..||||.|||||.||.|||||.|||||.||.||||||||.|
BL03923___arg 399 CCCGACGGGCAACCTGCACCTTGGACATGCCCGCGGAGCCGCTGTCGGAG 448
BSNT_05709___ 449 ATTCCTTGTGCAACGTGCTTTCAAAAGCGGGTTACGATGTAAGCCGCGAA 498
|||||.|.|||||.||.|||..|||||||||.||.||.||.|||||||||
BL03923___arg 449 ATTCCCTCTGCAATGTACTTGAAAAAGCGGGGTATGAAGTGAGCCGCGAA 498
BSNT_05709___ 499 TACTACATTAACGATGCGGGTAACCAAATCAACAATCTGGCGCTTTCTGT 548
||.||.||.||||||||.||.||.|||||||||||.||.|||.|.||.||
BL03923___arg 499 TATTATATCAACGATGCCGGCAATCAAATCAACAACCTCGCGTTATCCGT 548
BSNT_05709___ 549 TGAAGTCCGTTACTTTGAAGCACTCGGATTGGAAAAACCGATGCCGGAGG 598
.||||.||||||||||.|.||.||.|||...||.||.||||||||.||.|
BL03923___arg 549 CGAAGCCCGTTACTTTCAGGCGCTTGGAAAAGATAAGCCGATGCCTGAAG 598
BSNT_05709___ 599 ATGGCTACCGCGGCGAGGATATCATTGCGATCGG---AAAGCGTCTCGCT 645
|.||.||.|.||||||.|||||.|..|..||||| |||| |||||.
BL03923___arg 599 ACGGGTATCACGGCGAAGATATTAAGGAAATCGGCCAAAAG---CTCGCC 645
BSNT_05709___ 646 GAGGAATACGGTGATCGTTTCGTTAACGAAGAAGAAAGTGAACGCCTCGC 695
||.||||.|||.||||||||.|||.|.||||||||.||.|||||||||||
BL03923___arg 646 GACGAATTCGGCGATCGTTTTGTTCATGAAGAAGAGAGCGAACGCCTCGC 695
BSNT_05709___ 696 GTTTTTCCGTGAATACGGCCTGAAATATGAGCTGGAAAAGCTTCGCAAGG 745
|||||||||.|||||||||.|.||.||.||..|||..||.|||||..|.|
BL03923___arg 696 GTTTTTCCGCGAATACGGCTTAAAGTACGAATTGGGCAAACTTCGTGAAG 745
BSNT_05709___ 746 ACTTGGAAAACTTCCGTGTGCCGTTTGATGTGTGGTATTCAGAAACTTCA 795
||.||||.||.||||||||.||.||||||||.|||||.||.||.||.||.
BL03923___arg 746 ACCTGGAGAATTTCCGTGTCCCATTTGATGTCTGGTACTCTGAGACATCG 795
BSNT_05709___ 796 CTGTACCAAAATGGAAAAATCGACAAGGCGCTTGAAGCGCTCCGCGAAAA 845
||.||||||||.|||||.|||||..|||||||.|||||.||.||||||||
BL03923___arg 796 CTTTACCAAAACGGAAAGATCGATCAGGCGCTCGAAGCCCTTCGCGAAAA 845
BSNT_05709___ 846 AGGCCATGTCTATGAAGAAGACGGCGCGACTTGGTTCCGTTCCACGACGT 895
|||.|||.||||||||||||||||.|||||.||||||||.||.|||.|||
BL03923___arg 846 AGGGCATATCTATGAAGAAGACGGAGCGACATGGTTCCGCTCGACGGCGT 895
BSNT_05709___ 896 TTGGCGATGATAAAGACCGCGTATTGATCAAGAAGGACGGCACGTACACG 945
|.||||||||.|||||||||||..|||||||.||.|||||..|.||||||
BL03923___arg 896 TCGGCGATGACAAAGACCGCGTGCTGATCAAAAAAGACGGATCCTACACG 945
BSNT_05709___ 946 TACCTGCTTCCTGATATCGCGTATCATAAGGACAAGCTTGACCGCGGCTT 995
||.||.||.|||||.|||||.|||||.||.||||||||||||||||||||
BL03923___arg 946 TATCTTCTGCCTGACATCGCTTATCACAAAGACAAGCTTGACCGCGGCTT 995
BSNT_05709___ 996 TGATAAGCTGATCAACGTTTGGGGCGCCGATCACCACGGCTACATCCCGC 1045
..|.|||||||||||.||.|||||.||.||.||.||||||||.|||||||
BL03923___arg 996 CCAAAAGCTGATCAATGTATGGGGAGCAGACCATCACGGCTATATCCCGC 1045
BSNT_05709___ 1046 GTATGAAAGCGGCAATCGAAGCGCTGGGCTATGAAAAAGGAACGCTTGAA 1095
|.|||||||||||.||.||||||||.||.|||||.||||.|||||||||.
BL03923___arg 1046 GCATGAAAGCGGCTATTGAAGCGCTCGGTTATGACAAAGAAACGCTTGAG 1095
BSNT_05709___ 1096 GTAGAAATCATTCAGCTCGTTCACCTTTACAAAAACGGCGAGAAAATGAA 1145
||.||.||||||||||||||.||||||||||||||||||||.||||||||
BL03923___arg 1096 GTCGAGATCATTCAGCTCGTCCACCTTTACAAAAACGGCGAAAAAATGAA 1145
BSNT_05709___ 1146 AATGAGCAAACGGACCGGTAAAGCCGTAACGATGCGTGACCTGATTGAAG 1195
||||||||||.|.|||||.||||||||.||.|||||.||.||.|||||.|
BL03923___arg 1146 AATGAGCAAAAGAACCGGAAAAGCCGTCACAATGCGCGATCTTATTGATG 1195
BSNT_05709___ 1196 AAGTCGGCTTGGATGCCGTTCGTTACTTCTTTGCGATGCGAAGTGCGGAC 1245
|.||||||.|.||.||.||.||||||||||||||||||||.||.||.||.
BL03923___arg 1196 AGGTCGGCCTTGACGCTGTGCGTTACTTCTTTGCGATGCGCAGCGCCGAT 1245
BSNT_05709___ 1246 ACCCATATGGATTTTGACTTAGATCTTGCTGTATCAACATCTAACGAAAA 1295
|||||||||||.||||||.|.|||||.||.||.|||||||||||.||.||
BL03923___arg 1246 ACCCATATGGACTTTGACCTTGATCTGGCCGTCTCAACATCTAATGAGAA 1295
BSNT_05709___ 1296 CCCTGTGTATTATGCACAATATGCACATGCCCGAATCTGCAGCATGCTTC 1345
.||.||.||.||.||.||.||.||.|||||..||||.|||||||||||.|
BL03923___arg 1296 TCCAGTTTACTACGCGCAGTACGCCCATGCGAGAATTTGCAGCATGCTGC 1345
BSNT_05709___ 1346 GCCAAGGGGAAGA----------------GCAGGGA--CTTAAACCGGCG 1377
|||||||.||||| |.||||| |||
BL03923___arg 1346 GCCAAGGCGAAGAAAAAGGCATTTCTTTTGAAGGGAACCTT--------- 1386
BSNT_05709___ 1378 GCGGATCTT--GATTTCAGCCATATTCAATCAGAAAAAGAATACGATCTG 1425
|||||| || |.||....||.||.|||||.||.||||||
BL03923___arg 1387 ---GATCTTACGA--------AGATCGGTTCTGAGAAAGAGTATGATCTG 1425
BSNT_05709___ 1426 CTGAAAACGATCGGCGGCTTCCCAGAGGCAGTGGCGGAAGCAGCGGAAAA 1475
||.|||..|||||||...|||||.|||||.||.||.||.||.||.||.||
BL03923___arg 1426 CTTAAAGTGATCGGCTCGTTCCCTGAGGCCGTCGCTGATGCCGCAGAGAA 1475
BSNT_05709___ 1476 ACGAATTCCGCACCGTGTCACAAACTATATTTATGATCTGGCCTCTGCTC 1525
.||.|||||||||||..|.|||||||||||||.|||..||||.||||..|
BL03923___arg 1476 GCGGATTCCGCACCGCATTACAAACTATATTTTTGAATTGGCATCTGTGC 1525
BSNT_05709___ 1526 TGCACAGCTTCTACAACGCAGAGAAAGTCATCGACCCTGAAAATGAAGAG 1575
|.||||||||.|||||.||.|||||||||.||||.||.|.|.|||||||.
BL03923___arg 1526 TTCACAGCTTTTACAATGCTGAGAAAGTCCTCGATCCGGCAGATGAAGAA 1575
BSNT_05709___ 1576 AAAAGCCGTGCGCGCCTGGCTTTAATGAAGGCAACGCAAATTACGCTGAA 1625
||||||||.||.||..|..|.||.|||||.|||||||||||.||..|.||
BL03923___arg 1576 AAAAGCCGGGCCCGTTTATCATTGATGAAAGCAACGCAAATCACATTAAA 1625
BSNT_05709___ 1626 CAATGCGCTTCAGCTGATCGGCGTATCGGCTCCGGAAAAAATGTAA 1671
.|||||.||..||||||||||||||||.||.||.||||||||||||
BL03923___arg 1626 TAATGCCCTCAAGCTGATCGGCGTATCAGCGCCTGAAAAAATGTAA 1671
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