Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_05711 and BL03922
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:27:49
# Commandline: needle
# -asequence dna-align/BSNT_05711___ywiB.1.5803.seq
# -bsequence dna-align/BL03922___ywiB.2.5803.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_05711___ywiB-BL03922___ywiB.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_05711___ywiB-BL03922___ywiB.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_05711___ywiB
# 2: BL03922___ywiB
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 456
# Identity: 308/456 (67.5%)
# Similarity: 308/456 (67.5%)
# Gaps: 54/456 (11.8%)
# Score: 918.5
#
#
#=======================================
BSNT_05711___ 1 ATGAAGCAAGAGACA-CCGATAACACTCCATGTGAAGTCTGTGATC---- 45
|||.|.||.|||||| |||.|.|.| ||.|||||||.|||||.|||
BL03922___ywi 1 ATGGATCAGGAGACACCCGTTCATA-TCTATGTGAAATCTGTTATCCGGG 49
BSNT_05711___ 46 GAGGATGACGGAAACCAAGAAGTCATCGAATTCCGCACCACCGGATTTTA 95
.||||| ||||.||..|||.| |||||.|||||.||.||.||||||||
BL03922___ywi 50 AAGGAT--CGGACACGGAGACG--ATCGAGTTCCGGACAACTGGATTTTA 95
BSNT_05711___ 96 CTATGTAAAACAAAATAAAGTGTATCTATCTTATTATGAAGAACACGA-- 143
.|||.|.|||.||.|||||.|.|||||.||||||.|||||||.||.||
BL03922___ywi 96 TTATATGAAAAAAGATAAAATATATCTTTCTTATCATGAAGAGCATGATG 145
BSNT_05711___ 144 CTTAGGCAAAGTCAAAACGATTGTGAAAGTAAGCGAAGGCGAAGTCCTGG 193
|| ||.||.||.||.|||||.||.||.|.|||.|||..||||||.||||
BL03922___ywi 146 CT--GGAAAGGTGAAGACGATCGTCAAGGCAAGTGAAAACGAAGTTCTGG 193
BSNT_05711___ 194 TCATGAGGTCAGGCGCTGTCAAAATGAATCAGCGTTTCGTAAAGG--GAG 241
|||||.|.||.|||||..||.|||||||.|||||.||| ||| |.|
BL03922___ywi 194 TCATGCGTTCCGGCGCCATCGAAATGAAACAGCGCTTC----AGGCCGGG 239
BSNT_05711___ 242 CTTC--CACAATTGCTAAATATAAAATGTCATTTGG------TGAGCTTG 283
|..| |||..|..||.|.|||||||||.||||.|| .|||||.|
BL03922___ywi 240 CAGCCGCACCGTCACTCATTATAAAATGCCATTCGGCAGACTCGAGCTCG 289
BSNT_05711___ 284 AGC-TGAAAAC--AAGCACAAAATCGATTCA---ATCTGATCTCGATGAA 327
|| ||.|.|| ||| |...||| |.||| |||.|....|| ||.
BL03922___ywi 290 -GCGTGGATACTAAAG--CTGTATC-AGTCACACATCAGCCGCCG--GAC 333
BSNT_05711___ 328 GAAAAAGGCCGTATCAGCATCGCATATGACATGCATGTCGGAGACGAGCA 377
|.||| .||||||||.|..||.||.|||..|||..|.||.||.||
BL03922___ywi 334 GGAAA------GATCAGCATTGAGTACGATATGATTGTAAGCGATGAACA 377
BSNT_05711___ 378 GGAGCATTTACATAATATGACGATCACGTATGAG-GGAGGAACTCACG-- 424
..|||||||||||||.|||.||||..||||| || |||||| ||||
BL03922___ywi 378 AAAGCATTTACATAAGATGTCGATTTCGTAT-AGAGGAGGA---CACGAG 423
BSNT_05711___ 425 -CATGA 429
|||||
BL03922___ywi 424 TCATGA 429
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