Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_05732 and BL03921
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:27:50
# Commandline: needle
# -asequence dna-align/BSNT_05732___speB.1.5803.seq
# -bsequence dna-align/BL03921___speB.2.5803.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_05732___speB-BL03921___speB.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_05732___speB-BL03921___speB.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_05732___speB
# 2: BL03921___speB
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 874
# Identity: 712/874 (81.5%)
# Similarity: 712/874 (81.5%)
# Gaps: 2/874 ( 0.2%)
# Score: 2900.0
#
#
#=======================================
BSNT_05732___ 1 ATGAGATTTGATGAAGCTTATTCAGGAAAAGTATTTATCGCGAGCCGTCC 50
|||||||||||||||||.|||||.||.||.||.||||||||.|||||.||
BL03921___spe 1 ATGAGATTTGATGAAGCATATTCCGGCAAGGTGTTTATCGCAAGCCGCCC 50
BSNT_05732___ 51 CGAGTGGGAAGAGGCGGACGCCATTCTTTACGGCATGCCGATGGACTGGA 100
|||.||||||||||||||||||||.||||||||||||||||||||.||||
BL03921___spe 51 CGATTGGGAAGAGGCGGACGCCATCCTTTACGGCATGCCGATGGATTGGA 100
BSNT_05732___ 101 CAGTCAGCTATCGCCCGGGCTCACGCTTTGGTCCAAGC-AGAATCCGTGA 149
|.||||||||.||.||.|||||.|||||.||||| .|| ||||||||.||
BL03921___spe 101 CGGTCAGCTACCGTCCCGGCTCCCGCTTCGGTCC-GGCGAGAATCCGCGA 149
BSNT_05732___ 150 GGTGTCAATCGGCCTTGAGGAATACAGCCCATATTTAGACCGCGATCTGG 199
||||||.|||||.|||||.|||||||||||.|||||.|||.|.||.||||
BL03921___spe 150 GGTGTCCATCGGACTTGAAGAATACAGCCCTTATTTGGACAGGGAGCTGG 199
BSNT_05732___ 200 CTGACTTGAACTTCTTTGACGCTGGCGACATTCCGCTGCCGTTCGGAAAT 249
..||..|..|.|||||||||||.||||||||.||||||||.|||||.||.
BL03921___spe 200 AAGAGGTTCATTTCTTTGACGCCGGCGACATCCCGCTGCCTTTCGGGAAC 249
BSNT_05732___ 250 CCGCAGCGAAGCCTGGATATGATTGAAGAGTACGTGGACAGCATTTTAGA 299
||||||...|||||.||.|||||||||||.||.||.||||||||||||||
BL03921___spe 250 CCGCAGAAGAGCCTCGACATGATTGAAGAATATGTCGACAGCATTTTAGA 299
BSNT_05732___ 300 AAAAGGGAAGTTCCCAATGGGTATGGGGGGAGAGCACCTCGTGTCATGGC 349
.|||||.||.|||||..|.|||||||||||||||||.|||||.|||||||
BL03921___spe 300 TAAAGGAAAATTCCCGCTCGGTATGGGGGGAGAGCATCTCGTTTCATGGC 349
BSNT_05732___ 350 CTGTCATTAAAGCGATGTACAAGAAATACCCAGACCTTGCGATTATCCAT 399
|.||||||||||||||||||||.|||||.||.||.|||||.||.||||||
BL03921___spe 350 CGGTCATTAAAGCGATGTACAAAAAATATCCCGATCTTGCCATCATCCAT 399
BSNT_05732___ 400 TTTGACGCACATACAGATCTTCGAGTTGATTATGAGGGAGAACCGCTTTC 449
.|.||.||.||.||||||||.||.||.||.|||||.|||||.|||||.||
BL03921___spe 400 ATGGATGCGCACACAGATCTCCGCGTCGACTATGAAGGAGAGCCGCTCTC 449
BSNT_05732___ 450 TCACTCCACGCCGATCCGTAAGGCGGCAGAATTGATCGGACCGCACAATG 499
.||.||.||||||||||||||.||.||.|||.||||||||||...|||||
BL03921___spe 450 GCATTCGACGCCGATCCGTAAAGCCGCGGAACTGATCGGACCCGGCAATG 499
BSNT_05732___ 500 TGTATTCATTCGGAATCCGTTCCGGCATGAAAGAAGAGTTTGAATGGGCG 549
|.|||||||||||.|||||.|||||||||||||||||.|||||||||||.
BL03921___spe 500 TCTATTCATTCGGCATCCGCTCCGGCATGAAAGAAGAATTTGAATGGGCA 549
BSNT_05732___ 550 AAGGAAAACGGCATGCACATCTCAAAATTTGAAGTGCTTGAACCGCTGAA 599
||.|||||||||||||||||.||.|||||||||||||||||.|||||.||
BL03921___spe 550 AAAGAAAACGGCATGCACATTTCTAAATTTGAAGTGCTTGAGCCGCTTAA 599
BSNT_05732___ 600 AGAGGTGCTTCCGAAGCTGGCGGGCCGTCCGGTTTATGTCACAATTGACA 649
||..||.||.|||||.||.|||||.||||||||||||||.||.||.||||
BL03921___spe 600 AGCCGTCCTGCCGAAACTCGCGGGGCGTCCGGTTTATGTGACGATCGACA 649
BSNT_05732___ 650 TTGACGTATTAGACCCTGCACACGCACCGGGTACAGGAACGGTTGACGCC 699
|.||.||.|||||.||.||.||.||.|||||.||.||.||||||||||||
BL03921___spe 650 TCGATGTCTTAGATCCCGCGCATGCGCCGGGAACCGGTACGGTTGACGCC 699
BSNT_05732___ 700 GGCGGCATCACGTCTAAAGAACTGCTTGCATCGGTCCATGAAATTGCGCG 749
||.||||||||.||.|||||.|||||.||.|||.|.||.|||||.||.||
BL03921___spe 700 GGAGGCATCACATCCAAAGAGCTGCTCGCTTCGATTCACGAAATCGCCCG 749
BSNT_05732___ 750 TTCAGAGGTAAACGTAAAGGGCGCTGATTTAGTGGAAGTCGCGCCGGTAT 799
.|||||.||.||.||....||.|..||..|.||.||||||||.||.||.|
BL03921___spe 750 CTCAGACGTCAATGTCGTTGGAGGAGACCTTGTCGAAGTCGCTCCTGTCT 799
BSNT_05732___ 800 ACGACCACTCAGAGCAAACGGCAAACACAGCCAGCAAAATCATCCGTGAA 849
|.|||||.||.||.|||||.|||||.||.||.|||||..|.||.||.|||
BL03921___spe 800 ATGACCATTCGGAACAAACCGCAAATACGGCAAGCAAGCTGATTCGCGAA 849
BSNT_05732___ 850 ATGCTGCTTGGGTTTGTGAAATAA 873
||||||||.||.|..|||||||||
BL03921___spe 850 ATGCTGCTCGGCTGGGTGAAATAA 873
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