Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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DNA alignment: BSNT_05732 and BL03921

See Amino acid alignment / Visit BSNT_05732 in genome browser / Return to Orthologue table
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# Program: needle
# Rundate: Mon  8 Mar 2010 06:27:50
# Commandline: needle
#    -asequence dna-align/BSNT_05732___speB.1.5803.seq
#    -bsequence dna-align/BL03921___speB.2.5803.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile dna-align/BSNT_05732___speB-BL03921___speB.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_05732___speB-BL03921___speB.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_05732___speB
# 2: BL03921___speB
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 874
# Identity:     712/874 (81.5%)
# Similarity:   712/874 (81.5%)
# Gaps:           2/874 ( 0.2%)
# Score: 2900.0
# 
#
#=======================================

BSNT_05732___      1 ATGAGATTTGATGAAGCTTATTCAGGAAAAGTATTTATCGCGAGCCGTCC     50
                     |||||||||||||||||.|||||.||.||.||.||||||||.|||||.||
BL03921___spe      1 ATGAGATTTGATGAAGCATATTCCGGCAAGGTGTTTATCGCAAGCCGCCC     50

BSNT_05732___     51 CGAGTGGGAAGAGGCGGACGCCATTCTTTACGGCATGCCGATGGACTGGA    100
                     |||.||||||||||||||||||||.||||||||||||||||||||.||||
BL03921___spe     51 CGATTGGGAAGAGGCGGACGCCATCCTTTACGGCATGCCGATGGATTGGA    100

BSNT_05732___    101 CAGTCAGCTATCGCCCGGGCTCACGCTTTGGTCCAAGC-AGAATCCGTGA    149
                     |.||||||||.||.||.|||||.|||||.||||| .|| ||||||||.||
BL03921___spe    101 CGGTCAGCTACCGTCCCGGCTCCCGCTTCGGTCC-GGCGAGAATCCGCGA    149

BSNT_05732___    150 GGTGTCAATCGGCCTTGAGGAATACAGCCCATATTTAGACCGCGATCTGG    199
                     ||||||.|||||.|||||.|||||||||||.|||||.|||.|.||.||||
BL03921___spe    150 GGTGTCCATCGGACTTGAAGAATACAGCCCTTATTTGGACAGGGAGCTGG    199

BSNT_05732___    200 CTGACTTGAACTTCTTTGACGCTGGCGACATTCCGCTGCCGTTCGGAAAT    249
                     ..||..|..|.|||||||||||.||||||||.||||||||.|||||.||.
BL03921___spe    200 AAGAGGTTCATTTCTTTGACGCCGGCGACATCCCGCTGCCTTTCGGGAAC    249

BSNT_05732___    250 CCGCAGCGAAGCCTGGATATGATTGAAGAGTACGTGGACAGCATTTTAGA    299
                     ||||||...|||||.||.|||||||||||.||.||.||||||||||||||
BL03921___spe    250 CCGCAGAAGAGCCTCGACATGATTGAAGAATATGTCGACAGCATTTTAGA    299

BSNT_05732___    300 AAAAGGGAAGTTCCCAATGGGTATGGGGGGAGAGCACCTCGTGTCATGGC    349
                     .|||||.||.|||||..|.|||||||||||||||||.|||||.|||||||
BL03921___spe    300 TAAAGGAAAATTCCCGCTCGGTATGGGGGGAGAGCATCTCGTTTCATGGC    349

BSNT_05732___    350 CTGTCATTAAAGCGATGTACAAGAAATACCCAGACCTTGCGATTATCCAT    399
                     |.||||||||||||||||||||.|||||.||.||.|||||.||.||||||
BL03921___spe    350 CGGTCATTAAAGCGATGTACAAAAAATATCCCGATCTTGCCATCATCCAT    399

BSNT_05732___    400 TTTGACGCACATACAGATCTTCGAGTTGATTATGAGGGAGAACCGCTTTC    449
                     .|.||.||.||.||||||||.||.||.||.|||||.|||||.|||||.||
BL03921___spe    400 ATGGATGCGCACACAGATCTCCGCGTCGACTATGAAGGAGAGCCGCTCTC    449

BSNT_05732___    450 TCACTCCACGCCGATCCGTAAGGCGGCAGAATTGATCGGACCGCACAATG    499
                     .||.||.||||||||||||||.||.||.|||.||||||||||...|||||
BL03921___spe    450 GCATTCGACGCCGATCCGTAAAGCCGCGGAACTGATCGGACCCGGCAATG    499

BSNT_05732___    500 TGTATTCATTCGGAATCCGTTCCGGCATGAAAGAAGAGTTTGAATGGGCG    549
                     |.|||||||||||.|||||.|||||||||||||||||.|||||||||||.
BL03921___spe    500 TCTATTCATTCGGCATCCGCTCCGGCATGAAAGAAGAATTTGAATGGGCA    549

BSNT_05732___    550 AAGGAAAACGGCATGCACATCTCAAAATTTGAAGTGCTTGAACCGCTGAA    599
                     ||.|||||||||||||||||.||.|||||||||||||||||.|||||.||
BL03921___spe    550 AAAGAAAACGGCATGCACATTTCTAAATTTGAAGTGCTTGAGCCGCTTAA    599

BSNT_05732___    600 AGAGGTGCTTCCGAAGCTGGCGGGCCGTCCGGTTTATGTCACAATTGACA    649
                     ||..||.||.|||||.||.|||||.||||||||||||||.||.||.||||
BL03921___spe    600 AGCCGTCCTGCCGAAACTCGCGGGGCGTCCGGTTTATGTGACGATCGACA    649

BSNT_05732___    650 TTGACGTATTAGACCCTGCACACGCACCGGGTACAGGAACGGTTGACGCC    699
                     |.||.||.|||||.||.||.||.||.|||||.||.||.||||||||||||
BL03921___spe    650 TCGATGTCTTAGATCCCGCGCATGCGCCGGGAACCGGTACGGTTGACGCC    699

BSNT_05732___    700 GGCGGCATCACGTCTAAAGAACTGCTTGCATCGGTCCATGAAATTGCGCG    749
                     ||.||||||||.||.|||||.|||||.||.|||.|.||.|||||.||.||
BL03921___spe    700 GGAGGCATCACATCCAAAGAGCTGCTCGCTTCGATTCACGAAATCGCCCG    749

BSNT_05732___    750 TTCAGAGGTAAACGTAAAGGGCGCTGATTTAGTGGAAGTCGCGCCGGTAT    799
                     .|||||.||.||.||....||.|..||..|.||.||||||||.||.||.|
BL03921___spe    750 CTCAGACGTCAATGTCGTTGGAGGAGACCTTGTCGAAGTCGCTCCTGTCT    799

BSNT_05732___    800 ACGACCACTCAGAGCAAACGGCAAACACAGCCAGCAAAATCATCCGTGAA    849
                     |.|||||.||.||.|||||.|||||.||.||.|||||..|.||.||.|||
BL03921___spe    800 ATGACCATTCGGAACAAACCGCAAATACGGCAAGCAAGCTGATTCGCGAA    849

BSNT_05732___    850 ATGCTGCTTGGGTTTGTGAAATAA    873
                     ||||||||.||.|..|||||||||
BL03921___spe    850 ATGCTGCTCGGCTGGGTGAAATAA    873


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