Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_05733 and BL03920
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:27:50
# Commandline: needle
# -asequence dna-align/BSNT_05733___speE.1.5803.seq
# -bsequence dna-align/BL03920___speE.2.5803.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_05733___speE-BL03920___speE.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_05733___speE-BL03920___speE.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_05733___speE
# 2: BL03920___speE
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 831
# Identity: 698/831 (84.0%)
# Similarity: 698/831 (84.0%)
# Gaps: 0/831 ( 0.0%)
# Score: 2958.0
#
#
#=======================================
BSNT_05733___ 1 TTGAGCGAACTTTGGTACACAGAGAAGCAGACGAAAAACTTTGGCATTAC 50
|||||||.|||||||||.|||||||||||.||||||||.||.||.|||||
BL03920___spe 1 TTGAGCGGACTTTGGTATACAGAGAAGCAAACGAAAAATTTCGGTATTAC 50
BSNT_05733___ 51 GATGAAGGTTAACAAGACGTTACATACAGAACAAACGGAGTTTCAGCATT 100
.|||||..|.||||.|||.|||||||||||.||.||.||.|||||..|..
BL03920___spe 51 AATGAAAATCAACAGGACTTTACATACAGAGCAGACAGATTTTCAAAAGC 100
BSNT_05733___ 101 TAGAAATGGTGGAAACAGAAGAGTTCGGCAACATGCTGTTTTTGGACGGC 150
|.|||||||..||.||.|||||.|||||||||||||||||||||||||||
BL03920___spe 101 TCGAAATGGCCGAGACTGAAGAATTCGGCAACATGCTGTTTTTGGACGGC 150
BSNT_05733___ 151 ATGGTGATGACATCTGAAAAAGACGAATTCGTTTATCACGAAATGGTGGC 200
|||||.|||||||||||||||||.|||||.||.||.||||||||||||||
BL03920___spe 151 ATGGTCATGACATCTGAAAAAGATGAATTTGTCTACCACGAAATGGTGGC 200
BSNT_05733___ 201 GCATGTGCCATTATTTACGCACCCAAATCCGGAGCACGTTCTTGTAGTCG 250
|||.|||||..|.||||||||.||.|||||.|||||.||.|||||.||||
BL03920___spe 201 GCACGTGCCCCTGTTTACGCATCCGAATCCTGAGCATGTGCTTGTGGTCG 250
BSNT_05733___ 251 GCGGCGGTGACGGCGGCGTTATCAGAGAAATCCTGAAGCACCCAAGCGTG 300
|||||||.|||||||||||||||.|.|||||..|||||||.||.||||||
BL03920___spe 251 GCGGCGGAGACGGCGGCGTTATCCGTGAAATTTTGAAGCATCCGAGCGTG 300
BSNT_05733___ 301 AAAAAAGCGACACTTGTAGACATTGACGGCAAGGTGATCGAATACTCTAA 350
|||||||||||.|||||.||.|||||||||||||||||||||||.||.||
BL03920___spe 301 AAAAAAGCGACGCTTGTCGATATTGACGGCAAGGTGATCGAATATTCCAA 350
BSNT_05733___ 351 AAAGTTCCTTCCTTCTATCGCAGGCAAACTGGATGATCCGCGCGTTGACG 400
.||.|||.|.|||||.||.|||||||||||.||.|||||||||||.||.|
BL03920___spe 351 GAAATTCTTGCCTTCCATTGCAGGCAAACTTGACGATCCGCGCGTCGAAG 400
BSNT_05733___ 401 TGCAGGTAGATGACGGATTTATGCACATTGCAAAATCTGAAAATCAATAT 450
|..|.||.||||||||.||.|||||||||||..|||||||||||.|.||.
BL03920___spe 401 TAAAAGTCGATGACGGCTTCATGCACATTGCCCAATCTGAAAATGAGTAC 450
BSNT_05733___ 451 GACGTCATCATGGTAGATTCGACTGAACCAGTCGGACCGGCTGTAAACCT 500
||.|||||||||||.|||||.||.||.|||||.||.||.|||||.|||.|
BL03920___spe 451 GATGTCATCATGGTGGATTCAACCGAGCCAGTAGGGCCTGCTGTCAACTT 500
BSNT_05733___ 501 GTTTACAAAAGGATTCTACGCAGGAATCGCTAAAGCGCTGAAAGAAGACG 550
||||||||||||.||.|||||.||.||.||.||||||||.||.|||||||
BL03920___spe 501 GTTTACAAAAGGCTTTTACGCCGGCATAGCAAAAGCGCTAAAGGAAGACG 550
BSNT_05733___ 551 GCATTTTTGTCGCACAGACGGACAACCCATGGTTTACACCGGAATTAATC 600
|||||||.||.||.||||||||||||||.|||||||||||.|||.|.|||
BL03920___spe 551 GCATTTTCGTTGCTCAGACGGACAACCCTTGGTTTACACCTGAACTGATC 600
BSNT_05733___ 601 ACAAATGTACAGCGCGACGTGAAGGAAATCTTCCCGATTACGAAGCTGTA 650
|||||.||.||||||||.||.||.||.||||||||||||||.||||||||
BL03920___spe 601 ACAAACGTTCAGCGCGATGTAAAAGAGATCTTCCCGATTACAAAGCTGTA 650
BSNT_05733___ 651 TACGGCGAACATTCCGACATATCCAAGCGGTTTGTGGACATTTACAATTG 700
|..|||.|||||||||||||||||||||||.||||||||.|||||.||.|
BL03920___spe 651 TTTGGCCAACATTCCGACATATCCAAGCGGATTGTGGACGTTTACGATCG 700
BSNT_05733___ 701 GCTCGAAAAAATATGATCCGCTTGCAGTGGAAGACAGCCGTTTCTTCGAT 750
|.|||||||||||.|||||.||||.||||||.||||||||.|||||.|||
BL03920___spe 701 GTTCGAAAAAATACGATCCTCTTGAAGTGGAGGACAGCCGCTTCTTTGAT 750
BSNT_05733___ 751 ATTGAGACGAAATATTACACAAAAGATATTCATAAAGCGGCGTTTGTTCT 800
||||||||||||||.|||||||||||.||||||||||||||.||.||.||
BL03920___spe 751 ATTGAGACGAAATACTACACAAAAGAAATTCATAAAGCGGCATTCGTCCT 800
BSNT_05733___ 801 GCCGAAATTTGTGAGTGACCTGATTAAATAA 831
.||||||||.||.||.||..|.||.||||||
BL03920___spe 801 TCCGAAATTCGTCAGCGATTTAATCAAATAA 831
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