Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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DNA alignment: BSNT_05733 and BL03920

See Amino acid alignment / Visit BSNT_05733 in genome browser / Return to Orthologue table
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# Program: needle
# Rundate: Mon  8 Mar 2010 06:27:50
# Commandline: needle
#    -asequence dna-align/BSNT_05733___speE.1.5803.seq
#    -bsequence dna-align/BL03920___speE.2.5803.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile dna-align/BSNT_05733___speE-BL03920___speE.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_05733___speE-BL03920___speE.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_05733___speE
# 2: BL03920___speE
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 831
# Identity:     698/831 (84.0%)
# Similarity:   698/831 (84.0%)
# Gaps:           0/831 ( 0.0%)
# Score: 2958.0
# 
#
#=======================================

BSNT_05733___      1 TTGAGCGAACTTTGGTACACAGAGAAGCAGACGAAAAACTTTGGCATTAC     50
                     |||||||.|||||||||.|||||||||||.||||||||.||.||.|||||
BL03920___spe      1 TTGAGCGGACTTTGGTATACAGAGAAGCAAACGAAAAATTTCGGTATTAC     50

BSNT_05733___     51 GATGAAGGTTAACAAGACGTTACATACAGAACAAACGGAGTTTCAGCATT    100
                     .|||||..|.||||.|||.|||||||||||.||.||.||.|||||..|..
BL03920___spe     51 AATGAAAATCAACAGGACTTTACATACAGAGCAGACAGATTTTCAAAAGC    100

BSNT_05733___    101 TAGAAATGGTGGAAACAGAAGAGTTCGGCAACATGCTGTTTTTGGACGGC    150
                     |.|||||||..||.||.|||||.|||||||||||||||||||||||||||
BL03920___spe    101 TCGAAATGGCCGAGACTGAAGAATTCGGCAACATGCTGTTTTTGGACGGC    150

BSNT_05733___    151 ATGGTGATGACATCTGAAAAAGACGAATTCGTTTATCACGAAATGGTGGC    200
                     |||||.|||||||||||||||||.|||||.||.||.||||||||||||||
BL03920___spe    151 ATGGTCATGACATCTGAAAAAGATGAATTTGTCTACCACGAAATGGTGGC    200

BSNT_05733___    201 GCATGTGCCATTATTTACGCACCCAAATCCGGAGCACGTTCTTGTAGTCG    250
                     |||.|||||..|.||||||||.||.|||||.|||||.||.|||||.||||
BL03920___spe    201 GCACGTGCCCCTGTTTACGCATCCGAATCCTGAGCATGTGCTTGTGGTCG    250

BSNT_05733___    251 GCGGCGGTGACGGCGGCGTTATCAGAGAAATCCTGAAGCACCCAAGCGTG    300
                     |||||||.|||||||||||||||.|.|||||..|||||||.||.||||||
BL03920___spe    251 GCGGCGGAGACGGCGGCGTTATCCGTGAAATTTTGAAGCATCCGAGCGTG    300

BSNT_05733___    301 AAAAAAGCGACACTTGTAGACATTGACGGCAAGGTGATCGAATACTCTAA    350
                     |||||||||||.|||||.||.|||||||||||||||||||||||.||.||
BL03920___spe    301 AAAAAAGCGACGCTTGTCGATATTGACGGCAAGGTGATCGAATATTCCAA    350

BSNT_05733___    351 AAAGTTCCTTCCTTCTATCGCAGGCAAACTGGATGATCCGCGCGTTGACG    400
                     .||.|||.|.|||||.||.|||||||||||.||.|||||||||||.||.|
BL03920___spe    351 GAAATTCTTGCCTTCCATTGCAGGCAAACTTGACGATCCGCGCGTCGAAG    400

BSNT_05733___    401 TGCAGGTAGATGACGGATTTATGCACATTGCAAAATCTGAAAATCAATAT    450
                     |..|.||.||||||||.||.|||||||||||..|||||||||||.|.||.
BL03920___spe    401 TAAAAGTCGATGACGGCTTCATGCACATTGCCCAATCTGAAAATGAGTAC    450

BSNT_05733___    451 GACGTCATCATGGTAGATTCGACTGAACCAGTCGGACCGGCTGTAAACCT    500
                     ||.|||||||||||.|||||.||.||.|||||.||.||.|||||.|||.|
BL03920___spe    451 GATGTCATCATGGTGGATTCAACCGAGCCAGTAGGGCCTGCTGTCAACTT    500

BSNT_05733___    501 GTTTACAAAAGGATTCTACGCAGGAATCGCTAAAGCGCTGAAAGAAGACG    550
                     ||||||||||||.||.|||||.||.||.||.||||||||.||.|||||||
BL03920___spe    501 GTTTACAAAAGGCTTTTACGCCGGCATAGCAAAAGCGCTAAAGGAAGACG    550

BSNT_05733___    551 GCATTTTTGTCGCACAGACGGACAACCCATGGTTTACACCGGAATTAATC    600
                     |||||||.||.||.||||||||||||||.|||||||||||.|||.|.|||
BL03920___spe    551 GCATTTTCGTTGCTCAGACGGACAACCCTTGGTTTACACCTGAACTGATC    600

BSNT_05733___    601 ACAAATGTACAGCGCGACGTGAAGGAAATCTTCCCGATTACGAAGCTGTA    650
                     |||||.||.||||||||.||.||.||.||||||||||||||.||||||||
BL03920___spe    601 ACAAACGTTCAGCGCGATGTAAAAGAGATCTTCCCGATTACAAAGCTGTA    650

BSNT_05733___    651 TACGGCGAACATTCCGACATATCCAAGCGGTTTGTGGACATTTACAATTG    700
                     |..|||.|||||||||||||||||||||||.||||||||.|||||.||.|
BL03920___spe    651 TTTGGCCAACATTCCGACATATCCAAGCGGATTGTGGACGTTTACGATCG    700

BSNT_05733___    701 GCTCGAAAAAATATGATCCGCTTGCAGTGGAAGACAGCCGTTTCTTCGAT    750
                     |.|||||||||||.|||||.||||.||||||.||||||||.|||||.|||
BL03920___spe    701 GTTCGAAAAAATACGATCCTCTTGAAGTGGAGGACAGCCGCTTCTTTGAT    750

BSNT_05733___    751 ATTGAGACGAAATATTACACAAAAGATATTCATAAAGCGGCGTTTGTTCT    800
                     ||||||||||||||.|||||||||||.||||||||||||||.||.||.||
BL03920___spe    751 ATTGAGACGAAATACTACACAAAAGAAATTCATAAAGCGGCATTCGTCCT    800

BSNT_05733___    801 GCCGAAATTTGTGAGTGACCTGATTAAATAA    831
                     .||||||||.||.||.||..|.||.||||||
BL03920___spe    801 TCCGAAATTCGTCAGCGATTTAATCAAATAA    831


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