Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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DNA alignment: BSNT_05750 and BL03916

See Amino acid alignment / Visit BSNT_05750 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:27:51
# Commandline: needle
#    -asequence dna-align/BSNT_05750___ywgA.1.5803.seq
#    -bsequence dna-align/BL03916___ywgA.2.5803.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile dna-align/BSNT_05750___ywgA-BL03916___ywgA.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_05750___ywgA-BL03916___ywgA.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_05750___ywgA
# 2: BL03916___ywgA
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 519
# Identity:     390/519 (75.1%)
# Similarity:   390/519 (75.1%)
# Gaps:          33/519 ( 6.4%)
# Score: 1465.5
# 
#
#=======================================

BSNT_05750___      1 TTGTTGAAAGAACATGCAAAACTGATGAAGGTGTTCTCGGATTCTGGAGA     50
                     |||||.||||||||||||||.|||||||||||.|||||||||||.||.||
BL03916___ywg      1 TTGTTAAAAGAACATGCAAAGCTGATGAAGGTCTTCTCGGATTCGGGGGA     50

BSNT_05750___     51 AATCATCGGGCGAAAGAAGCTGCAGAAAATGATTTATATCGCCAAGAAAA    100
                     .||..|||||||.||.||||||||||||||.|||||||||||.||||||.
BL03916___ywg     51 GATTGTCGGGCGGAAAAAGCTGCAGAAAATCATTTATATCGCAAAGAAAT    100

BSNT_05750___    101 TGCAGTTTCCTTTCTATGAGAAATATGATTTTCACTTTTATGGACCGTAT    150
                     ||.||.|||||||.|||||.||.|||||||||||.|||||.||.||.|||
BL03916___ywg    101 TGGAGCTTCCTTTTTATGAAAAGTATGATTTTCATTTTTACGGGCCTTAT    150

BSNT_05750___    151 TCGGAGGAACTGACGCTCCAGATTGAAGAGCTGTGCAACCTTGGATTTCT    200
                     ||.|||||.||||||||.||..|.|||||.||.|||||.||.||||||||
BL03916___ywg    151 TCAGAGGAGCTGACGCTTCAAGTCGAAGAACTTTGCAATCTCGGATTTCT    200

BSNT_05750___    201 GCATGAGGTGAAGGAAAAAAAGGGCGGCTACTTTCAATACCGGTATTCGC    250
                     .|||||.||.||.|||||||||||||||||.|.|||||||||.|||||.|
BL03916___ywg    201 CCATGAAGTCAAAGAAAAAAAGGGCGGCTATTATCAATACCGCTATTCAC    250

BSNT_05750___    251 TGACTGA-----GACAGGCTCCGCATTTTTAGA-CCA-TGCTGATCTGGA    293
                     ..|||||     ||.|      |||.||||.|| ||| || |||.|||||
BL03916___ywg    251 CCACTGAAGCGGGAAA------GCAGTTTTTGAGCCAGTG-TGAGCTGGA    293

BSNT_05750___    294 CATGCCGGATATGAAAGGCTATATCGACAGTGTAAACAGCCGTTCATCAC    343
                     .||||.||||||.||||.||||.|.|||...||||||.|||..|||||.|
BL03916___ywg    294 TATGCGGGATATTAAAGCCTATTTAGACGACGTAAACGGCCAGTCATCGC    343

BSNT_05750___    344 GGTTTTTAGAGCTGGTTTCCACGATCCTTTACTTTGACGGGCTTGAGGAT    393
                     |.|||||.||.|||||.||.|||||..|.||.|||||.|||||.|||.|.
BL03916___ywg    344 GTTTTTTGGAACTGGTGTCGACGATTTTGTATTTTGAGGGGCTGGAGCAG    393

BSNT_05750___    394 GAGGAAAAGAAAGAAAAAGTCTTTACCATCAAAAGCAAGCAAAAATATAC    443
                     ||.||.|..|.|||||||||.||||||.|.||||||||.||....|||||
BL03916___ywg    394 GAAGAGATTAGAGAAAAAGTGTTTACCGTAAAAAGCAAACAGCGGTATAC    443

BSNT_05750___    444 AAATGAAGAATATGACGAAG----CGCTTCAATACATAGAGGAACTGAAG    489
                     ..|.|||||||..||.||||    ||||    ||||||.|..|.||    
BL03916___ywg    444 GGACGAAGAATTCGATGAAGCCGTCGCT----TACATAAAAAAGCT----    485

BSNT_05750___    490 CAGA----TTTGTTAA---    501
                     ||||    ||||||.|   
BL03916___ywg    486 CAGAAATCTTTGTTCATAA    504


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