Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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DNA alignment: BSNT_05752 and BL03914

See Amino acid alignment / Visit BSNT_05752 in genome browser / Return to Orthologue table
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# Program: needle
# Rundate: Mon  8 Mar 2010 06:27:51
# Commandline: needle
#    -asequence dna-align/BSNT_05752___ywfO.1.5803.seq
#    -bsequence dna-align/BL03914___ywfO.2.5803.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile dna-align/BSNT_05752___ywfO-BL03914___ywfO.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_05752___ywfO-BL03914___ywfO.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_05752___ywfO
# 2: BL03914___ywfO
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 1323
# Identity:    1050/1323 (79.4%)
# Similarity:  1050/1323 (79.4%)
# Gaps:          45/1323 ( 3.4%)
# Score: 4201.5
# 
#
#=======================================

BSNT_05752___      1 ATGGCGTATCCAAATGGAAAATTATCAGAAGAAAAAGTGTTTAAAGATCC     50
                     ||||||||||||||.|||||||||||||||||||||||||||||||||||
BL03914___ywf      1 ATGGCGTATCCAAACGGAAAATTATCAGAAGAAAAAGTGTTTAAAGATCC     50

BSNT_05752___     51 GGTGCACCGCTATGTTCATGTTCGGGACAAGCTGATATGGGATTTAATCG    100
                     .||.|||||||||||.||.||.||||||||||||||||||||.||.||||
BL03914___ywf     51 TGTTCACCGCTATGTCCACGTACGGGACAAGCTGATATGGGACTTGATCG    100

BSNT_05752___    101 GAACCCGTGAATTTCAGCGTCTCCGCAGAATTAAGCAGCTCGGCACGACC    150
                     |||||||.|||||||||.|.||.||||||||.||.|||||.||.||||||
BL03914___ywf    101 GAACCCGCGAATTTCAGAGGCTGCGCAGAATCAAACAGCTTGGGACGACC    150

BSNT_05752___    151 TATTTGACGTTCCATGGGGCTGAGCACAGCCGGTTCAACCATTCTCTCGG    200
                     |||||||||||.||.||.||.||.||||||||.|||||||||||||||||
BL03914___ywf    151 TATTTGACGTTTCACGGAGCCGAACACAGCCGTTTCAACCATTCTCTCGG    200

BSNT_05752___    201 TGTCTATGAAATTGTCAGAAGAATGGTTGATGACGTCTTTAAAGGCCGCC    250
                     .|||||||||||||||||||||||||||||||||||.|||||||||.|..
BL03914___ywf    201 CGTCTATGAAATTGTCAGAAGAATGGTTGATGACGTTTTTAAAGGCAGGG    250

BSNT_05752___    251 CTGAATGGGATGACAGTGAGCGCGAACTCTG--TTTGGCCGCGGCGCTGC    298
                     ..||||||||||||||.||||||||.||.||  ||||  |||.||..|||
BL03914___ywf    251 AGGAATGGGATGACAGCGAGCGCGATCTGTGCCTTTG--CGCCGCATTGC    298

BSNT_05752___    299 TTCATGACCTCGGGCACGGGCCGTTCTCGCATTCATTTGAAAAGGTCTTT    348
                     |.||.||..|.||||||||.|||||.||.|||||.||||||||||||||.
BL03914___ywf    299 TGCACGATTTGGGGCACGGCCCGTTTTCCCATTCGTTTGAAAAGGTCTTC    348

BSNT_05752___    349 CACCTTGACCACGAGGATTTTACAAGAGGTATCATTTTGGGAGACACGGA    398
                     |..|||||.||.||.||.|||||.||||..||||||||.||.||.||.||
BL03914___ywf    349 CGGCTTGATCATGAAGACTTTACGAGAGCGATCATTTTAGGCGATACAGA    398

BSNT_05752___    399 GGTTAATCAGGTGCTCAGAAAGGTGAGCCCGGGTTTCCCTCAGGATGTTG    448
                     .|||||.|..||..|.|..|||||.||.|||...||..|..|||||||.|
BL03914___ywf    399 AGTTAACCGAGTATTAAACAAGGTAAGTCCGACATTTGCAAAGGATGTCG    448

BSNT_05752___    449 CTGAAGTCATTGCCAAAACATATAAAAACAAGCAAGTGGTCAGCCTGATT    498
                     ||||||||||.||.|||||.|||.||||.|||||.||.|||||||||||.
BL03914___ywf    449 CTGAAGTCATCGCGAAAACCTATCAAAATAAGCAGGTCGTCAGCCTGATC    498

BSNT_05752___    499 TCGAGTCAGATTGACGCAGACCGCATGGATTACCTGCAGCGCGACGCATA    548
                     ||.||.|||||||||||.|||||||||||.|||||.|||.|.|||||.||
BL03914___ywf    499 TCAAGCCAGATTGACGCTGACCGCATGGACTACCTTCAGAGGGACGCCTA    548

BSNT_05752___    549 TTATACGGGCGTCAGCTACGGCCATTTTGATATGGAGCGGATTCTTCGGG    598
                     |||.||.||||||||||||||.|||||||||||||||||||||||.||.|
BL03914___ywf    549 TTACACCGGCGTCAGCTACGGTCATTTTGATATGGAGCGGATTCTCCGCG    598

BSNT_05752___    599 TGATGCGGCCGCGCGAGGATCAGATCGTCATTAAAGAAAGCGGAATGCAC    648
                     |.||||||||||||||.||.||.|||||||||||..|||||||||||||.
BL03914___ywf    599 TCATGCGGCCGCGCGAAGACCAAATCGTCATTAAGCAAAGCGGAATGCAT    648

BSNT_05752___    649 GCTGTCGAAGACTATATCATGAGCCGTTACCAAATGTACTGGCAGGTCTA    698
                     |||||.||.||||||||.||||||||.|||||.|||||||||||||||||
BL03914___ywf    649 GCTGTTGAGGACTATATTATGAGCCGGTACCAGATGTACTGGCAGGTCTA    698

BSNT_05752___    699 CTTCCATCCTGTGACTAGAAGTGCAGAGGTCATTTTAACGAAGATTCTTC    748
                     |||||||||||||||.||||||||.||.||.|||||.|||||||||||||
BL03914___ywf    699 CTTCCATCCTGTGACAAGAAGTGCGGAAGTGATTTTGACGAAGATTCTTC    748

BSNT_05752___    749 ACAGGGCGAAGCAGCTGCATGATGAAGGCTATGTCTTCACTCACGCTCCG    798
                     ||.|.||.||||||||.|||||.|||||||||||.|||||.||.||.||.
BL03914___ywf    749 ACCGTGCAAAGCAGCTTCATGAGGAAGGCTATGTTTTCACGCATGCGCCA    798

BSNT_05752___    799 GTTCATTTCTATTCTATTTTTGAAGGAAAATTGACACTGGAGGATTATGT    848
                     ||.|||||.|||||||||||||||||.||..|.|||.||||.||||||.|
BL03914___ywf    799 GTGCATTTTTATTCTATTTTTGAAGGCAATGTCACATTGGAAGATTATTT    848

BSNT_05752___    849 AAAGCTGGATGAATCTATTATTTTGTATTACTTCCAGGCCTGGGAGGATG    898
                     ||..||.||||||||.||.|||.|.|||||.||.|||||||||||..|.|
BL03914___ywf    849 AAGTCTTGATGAATCAATCATTCTTTATTATTTTCAGGCCTGGGAAAAAG    898

BSNT_05752___    899 AAGAAGACGCGATTTTATCCGACTTGTGCCGCAGATTCATTAACCGCCAG    948
                     ||||.||||..|||||.||.||.||.||||||.|.||.||.||||||..|
BL03914___ywf    899 AAGAGGACGAAATTTTGTCTGATTTATGCCGCCGTTTTATCAACCGCAGG    948

BSNT_05752___    949 CTTTTCCAATACGTTGAATTCAATCCGAATGAAGAAATGTCGGCTTATTT    998
                     ||.|||||.||.|..|||||||||||||||||.||||||.||.||||.||
BL03914___ywf    949 CTGTTCCAGTATGCGGAATTCAATCCGAATGAGGAAATGGCGACTTACTT    998

BSNT_05752___    999 TGAGCTGACTTCA--TTGTTCAAAGAGGCGGGGATCGAT-CCGAGCTATT   1045
                     |||.|||||  ||  |||||.|||||..|.|||||.||| |||| .||||
BL03914___ywf    999 TGAACTGAC--CAACTTGTTTAAAGAATCAGGGATTGATCCCGA-ATATT   1045

BSNT_05752___   1046 ATTTGGTCGTTGATTCTTCATCAGATCTGCCATACGATTTTTACCGACCA   1095
                     ||.|.||.||.|||||.||.||||||||.||.||.|||||.|||.||||.
BL03914___ywf   1046 ATCTTGTGGTGGATTCGTCCTCAGATCTTCCTTATGATTTCTACAGACCG   1095

BSNT_05752___   1096 GGAGAGGAAGAGGAGCGTCTGCCGATCCATCTCTTGACGCAAAACGGCCA   1145
                     ||.||.||||||||.||.||.|||||.||..|..|||||||.||||||||
BL03914___ywf   1096 GGGGAAGAAGAGGAACGCCTCCCGATTCAATTGCTGACGCACAACGGCCA   1145

BSNT_05752___   1146 AATTAAAGAGCTGTCCAGACAGTCGGCTATTGTGGAATCCATCTCAGGTA   1195
                     .|||||.||||||||..|.|||||.|.||||||.||..|.||.|||||.|
BL03914___ywf   1146 GATTAAGGAGCTGTCGCGGCAGTCCGATATTGTCGATGCGATATCAGGCA   1195

BSNT_05752___   1196 AACGGCGGACGGACCACAAGCTGTACTATCCAAAGGACTTGATTT-----   1240
                     |.|||.|.||||||||.||||||||.|..||     .||.|||||     
BL03914___ywf   1196 AGCGGAGAACGGACCATAAGCTGTATTTCCC-----GCTCGATTTAATCG   1240

BSNT_05752___   1241 ---------GTGACGGCACTAAACATCCGGAAGCGAAAATGAA--AATCC   1279
                              .|||||||..|   |||.||.||   |.||||||  |||  
BL03914___ywf   1241 AAGGGCTGCCTGACGGCCGT---CATGCGAAA---AGAATGAAAGAAT--   1282

BSNT_05752___   1280 GGCAGCTGCTGGGACTGACATAG   1302
                           ||||.|||||||.||||
BL03914___ywf   1283 ------TGCTCGGACTGAAATAG   1299


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