Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_05752 and BL03914
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:27:51
# Commandline: needle
# -asequence dna-align/BSNT_05752___ywfO.1.5803.seq
# -bsequence dna-align/BL03914___ywfO.2.5803.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_05752___ywfO-BL03914___ywfO.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_05752___ywfO-BL03914___ywfO.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_05752___ywfO
# 2: BL03914___ywfO
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 1323
# Identity: 1050/1323 (79.4%)
# Similarity: 1050/1323 (79.4%)
# Gaps: 45/1323 ( 3.4%)
# Score: 4201.5
#
#
#=======================================
BSNT_05752___ 1 ATGGCGTATCCAAATGGAAAATTATCAGAAGAAAAAGTGTTTAAAGATCC 50
||||||||||||||.|||||||||||||||||||||||||||||||||||
BL03914___ywf 1 ATGGCGTATCCAAACGGAAAATTATCAGAAGAAAAAGTGTTTAAAGATCC 50
BSNT_05752___ 51 GGTGCACCGCTATGTTCATGTTCGGGACAAGCTGATATGGGATTTAATCG 100
.||.|||||||||||.||.||.||||||||||||||||||||.||.||||
BL03914___ywf 51 TGTTCACCGCTATGTCCACGTACGGGACAAGCTGATATGGGACTTGATCG 100
BSNT_05752___ 101 GAACCCGTGAATTTCAGCGTCTCCGCAGAATTAAGCAGCTCGGCACGACC 150
|||||||.|||||||||.|.||.||||||||.||.|||||.||.||||||
BL03914___ywf 101 GAACCCGCGAATTTCAGAGGCTGCGCAGAATCAAACAGCTTGGGACGACC 150
BSNT_05752___ 151 TATTTGACGTTCCATGGGGCTGAGCACAGCCGGTTCAACCATTCTCTCGG 200
|||||||||||.||.||.||.||.||||||||.|||||||||||||||||
BL03914___ywf 151 TATTTGACGTTTCACGGAGCCGAACACAGCCGTTTCAACCATTCTCTCGG 200
BSNT_05752___ 201 TGTCTATGAAATTGTCAGAAGAATGGTTGATGACGTCTTTAAAGGCCGCC 250
.|||||||||||||||||||||||||||||||||||.|||||||||.|..
BL03914___ywf 201 CGTCTATGAAATTGTCAGAAGAATGGTTGATGACGTTTTTAAAGGCAGGG 250
BSNT_05752___ 251 CTGAATGGGATGACAGTGAGCGCGAACTCTG--TTTGGCCGCGGCGCTGC 298
..||||||||||||||.||||||||.||.|| |||| |||.||..|||
BL03914___ywf 251 AGGAATGGGATGACAGCGAGCGCGATCTGTGCCTTTG--CGCCGCATTGC 298
BSNT_05752___ 299 TTCATGACCTCGGGCACGGGCCGTTCTCGCATTCATTTGAAAAGGTCTTT 348
|.||.||..|.||||||||.|||||.||.|||||.||||||||||||||.
BL03914___ywf 299 TGCACGATTTGGGGCACGGCCCGTTTTCCCATTCGTTTGAAAAGGTCTTC 348
BSNT_05752___ 349 CACCTTGACCACGAGGATTTTACAAGAGGTATCATTTTGGGAGACACGGA 398
|..|||||.||.||.||.|||||.||||..||||||||.||.||.||.||
BL03914___ywf 349 CGGCTTGATCATGAAGACTTTACGAGAGCGATCATTTTAGGCGATACAGA 398
BSNT_05752___ 399 GGTTAATCAGGTGCTCAGAAAGGTGAGCCCGGGTTTCCCTCAGGATGTTG 448
.|||||.|..||..|.|..|||||.||.|||...||..|..|||||||.|
BL03914___ywf 399 AGTTAACCGAGTATTAAACAAGGTAAGTCCGACATTTGCAAAGGATGTCG 448
BSNT_05752___ 449 CTGAAGTCATTGCCAAAACATATAAAAACAAGCAAGTGGTCAGCCTGATT 498
||||||||||.||.|||||.|||.||||.|||||.||.|||||||||||.
BL03914___ywf 449 CTGAAGTCATCGCGAAAACCTATCAAAATAAGCAGGTCGTCAGCCTGATC 498
BSNT_05752___ 499 TCGAGTCAGATTGACGCAGACCGCATGGATTACCTGCAGCGCGACGCATA 548
||.||.|||||||||||.|||||||||||.|||||.|||.|.|||||.||
BL03914___ywf 499 TCAAGCCAGATTGACGCTGACCGCATGGACTACCTTCAGAGGGACGCCTA 548
BSNT_05752___ 549 TTATACGGGCGTCAGCTACGGCCATTTTGATATGGAGCGGATTCTTCGGG 598
|||.||.||||||||||||||.|||||||||||||||||||||||.||.|
BL03914___ywf 549 TTACACCGGCGTCAGCTACGGTCATTTTGATATGGAGCGGATTCTCCGCG 598
BSNT_05752___ 599 TGATGCGGCCGCGCGAGGATCAGATCGTCATTAAAGAAAGCGGAATGCAC 648
|.||||||||||||||.||.||.|||||||||||..|||||||||||||.
BL03914___ywf 599 TCATGCGGCCGCGCGAAGACCAAATCGTCATTAAGCAAAGCGGAATGCAT 648
BSNT_05752___ 649 GCTGTCGAAGACTATATCATGAGCCGTTACCAAATGTACTGGCAGGTCTA 698
|||||.||.||||||||.||||||||.|||||.|||||||||||||||||
BL03914___ywf 649 GCTGTTGAGGACTATATTATGAGCCGGTACCAGATGTACTGGCAGGTCTA 698
BSNT_05752___ 699 CTTCCATCCTGTGACTAGAAGTGCAGAGGTCATTTTAACGAAGATTCTTC 748
|||||||||||||||.||||||||.||.||.|||||.|||||||||||||
BL03914___ywf 699 CTTCCATCCTGTGACAAGAAGTGCGGAAGTGATTTTGACGAAGATTCTTC 748
BSNT_05752___ 749 ACAGGGCGAAGCAGCTGCATGATGAAGGCTATGTCTTCACTCACGCTCCG 798
||.|.||.||||||||.|||||.|||||||||||.|||||.||.||.||.
BL03914___ywf 749 ACCGTGCAAAGCAGCTTCATGAGGAAGGCTATGTTTTCACGCATGCGCCA 798
BSNT_05752___ 799 GTTCATTTCTATTCTATTTTTGAAGGAAAATTGACACTGGAGGATTATGT 848
||.|||||.|||||||||||||||||.||..|.|||.||||.||||||.|
BL03914___ywf 799 GTGCATTTTTATTCTATTTTTGAAGGCAATGTCACATTGGAAGATTATTT 848
BSNT_05752___ 849 AAAGCTGGATGAATCTATTATTTTGTATTACTTCCAGGCCTGGGAGGATG 898
||..||.||||||||.||.|||.|.|||||.||.|||||||||||..|.|
BL03914___ywf 849 AAGTCTTGATGAATCAATCATTCTTTATTATTTTCAGGCCTGGGAAAAAG 898
BSNT_05752___ 899 AAGAAGACGCGATTTTATCCGACTTGTGCCGCAGATTCATTAACCGCCAG 948
||||.||||..|||||.||.||.||.||||||.|.||.||.||||||..|
BL03914___ywf 899 AAGAGGACGAAATTTTGTCTGATTTATGCCGCCGTTTTATCAACCGCAGG 948
BSNT_05752___ 949 CTTTTCCAATACGTTGAATTCAATCCGAATGAAGAAATGTCGGCTTATTT 998
||.|||||.||.|..|||||||||||||||||.||||||.||.||||.||
BL03914___ywf 949 CTGTTCCAGTATGCGGAATTCAATCCGAATGAGGAAATGGCGACTTACTT 998
BSNT_05752___ 999 TGAGCTGACTTCA--TTGTTCAAAGAGGCGGGGATCGAT-CCGAGCTATT 1045
|||.||||| || |||||.|||||..|.|||||.||| |||| .||||
BL03914___ywf 999 TGAACTGAC--CAACTTGTTTAAAGAATCAGGGATTGATCCCGA-ATATT 1045
BSNT_05752___ 1046 ATTTGGTCGTTGATTCTTCATCAGATCTGCCATACGATTTTTACCGACCA 1095
||.|.||.||.|||||.||.||||||||.||.||.|||||.|||.||||.
BL03914___ywf 1046 ATCTTGTGGTGGATTCGTCCTCAGATCTTCCTTATGATTTCTACAGACCG 1095
BSNT_05752___ 1096 GGAGAGGAAGAGGAGCGTCTGCCGATCCATCTCTTGACGCAAAACGGCCA 1145
||.||.||||||||.||.||.|||||.||..|..|||||||.||||||||
BL03914___ywf 1096 GGGGAAGAAGAGGAACGCCTCCCGATTCAATTGCTGACGCACAACGGCCA 1145
BSNT_05752___ 1146 AATTAAAGAGCTGTCCAGACAGTCGGCTATTGTGGAATCCATCTCAGGTA 1195
.|||||.||||||||..|.|||||.|.||||||.||..|.||.|||||.|
BL03914___ywf 1146 GATTAAGGAGCTGTCGCGGCAGTCCGATATTGTCGATGCGATATCAGGCA 1195
BSNT_05752___ 1196 AACGGCGGACGGACCACAAGCTGTACTATCCAAAGGACTTGATTT----- 1240
|.|||.|.||||||||.||||||||.|..|| .||.|||||
BL03914___ywf 1196 AGCGGAGAACGGACCATAAGCTGTATTTCCC-----GCTCGATTTAATCG 1240
BSNT_05752___ 1241 ---------GTGACGGCACTAAACATCCGGAAGCGAAAATGAA--AATCC 1279
.|||||||..| |||.||.|| |.|||||| |||
BL03914___ywf 1241 AAGGGCTGCCTGACGGCCGT---CATGCGAAA---AGAATGAAAGAAT-- 1282
BSNT_05752___ 1280 GGCAGCTGCTGGGACTGACATAG 1302
||||.|||||||.||||
BL03914___ywf 1283 ------TGCTCGGACTGAAATAG 1299
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