Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_05754 and BL03913
See
Amino acid alignment /
Visit
BSNT_05754 in genome browser /
Return to
Orthologue table
########################################
# Program: needle
# Rundate: Mon 8 Mar 2010 06:27:51
# Commandline: needle
# -asequence dna-align/BSNT_05754___ywzC.1.5803.seq
# -bsequence dna-align/BL03913___ywzC.2.5803.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_05754___ywzC-BL03913___ywzC.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_05754___ywzC-BL03913___ywzC.aln
########################################
#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_05754___ywzC
# 2: BL03913___ywzC
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 226
# Identity: 182/226 (80.5%)
# Similarity: 182/226 (80.5%)
# Gaps: 2/226 ( 0.9%)
# Score: 722.0
#
#
#=======================================
BSNT_05754___ 1 ATGGCTAATGAATTTCGAGTGTGTGATGATTGCCAAGCCACTAATATCAA 50
||||||||||||||||||||.||.||.||||||||.|||||.|||.|.||
BL03913___ywz 1 ATGGCTAATGAATTTCGAGTATGCGACGATTGCCAGGCCACCAATTTAAA 50
BSNT_05754___ 51 AACATTGCTGCCGCGTTTGAAAGAAGTGGACCCGGACGCAAAGGTTGAGG 100
.||..|..||||.|||.||||||||.|.||.|||||.|||||.||.||..
BL03913___ywz 51 GACGCTTTTGCCCCGTCTGAAAGAAATTGATCCGGATGCAAAAGTGGAAA 100
BSNT_05754___ 101 TAGGATGCCAATCTTATTGCGGGCCCGGACGGAAAAAATCATTTGCTTTT 150
|.||.|||||.|||||.||||||||.|||||.||||||||.|||||.|||
BL03913___ywz 101 TCGGCTGCCAGTCTTACTGCGGGCCGGGACGAAAAAAATCGTTTGCGTTT 150
BSNT_05754___ 151 GTGAACAATCGCCCGCTGTCAGCTCC-GACAGAGGATGAGCTGATTGACA 199
||.||.|||||.|||||||||||||| || .||.||.||||||||.||.|
BL03913___ywz 151 GTCAATAATCGTCCGCTGTCAGCTCCTGA-TGAAGACGAGCTGATCGAAA 199
BSNT_05754___ 200 AAGTAAAAAAGAAAATAAAAAAGTAA 225
||||.|||||||||.|.|||||.|||
BL03913___ywz 200 AAGTGAAAAAGAAACTCAAAAAATAA 225
#---------------------------------------
#---------------------------------------
Copyright (C) Natto Genome Project, 2009-2010. All rights reserved.