Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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DNA alignment: BSNT_05754 and BL03913

See Amino acid alignment / Visit BSNT_05754 in genome browser / Return to Orthologue table
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# Program: needle
# Rundate: Mon  8 Mar 2010 06:27:51
# Commandline: needle
#    -asequence dna-align/BSNT_05754___ywzC.1.5803.seq
#    -bsequence dna-align/BL03913___ywzC.2.5803.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile dna-align/BSNT_05754___ywzC-BL03913___ywzC.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_05754___ywzC-BL03913___ywzC.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_05754___ywzC
# 2: BL03913___ywzC
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 226
# Identity:     182/226 (80.5%)
# Similarity:   182/226 (80.5%)
# Gaps:           2/226 ( 0.9%)
# Score: 722.0
# 
#
#=======================================

BSNT_05754___      1 ATGGCTAATGAATTTCGAGTGTGTGATGATTGCCAAGCCACTAATATCAA     50
                     ||||||||||||||||||||.||.||.||||||||.|||||.|||.|.||
BL03913___ywz      1 ATGGCTAATGAATTTCGAGTATGCGACGATTGCCAGGCCACCAATTTAAA     50

BSNT_05754___     51 AACATTGCTGCCGCGTTTGAAAGAAGTGGACCCGGACGCAAAGGTTGAGG    100
                     .||..|..||||.|||.||||||||.|.||.|||||.|||||.||.||..
BL03913___ywz     51 GACGCTTTTGCCCCGTCTGAAAGAAATTGATCCGGATGCAAAAGTGGAAA    100

BSNT_05754___    101 TAGGATGCCAATCTTATTGCGGGCCCGGACGGAAAAAATCATTTGCTTTT    150
                     |.||.|||||.|||||.||||||||.|||||.||||||||.|||||.|||
BL03913___ywz    101 TCGGCTGCCAGTCTTACTGCGGGCCGGGACGAAAAAAATCGTTTGCGTTT    150

BSNT_05754___    151 GTGAACAATCGCCCGCTGTCAGCTCC-GACAGAGGATGAGCTGATTGACA    199
                     ||.||.|||||.|||||||||||||| || .||.||.||||||||.||.|
BL03913___ywz    151 GTCAATAATCGTCCGCTGTCAGCTCCTGA-TGAAGACGAGCTGATCGAAA    199

BSNT_05754___    200 AAGTAAAAAAGAAAATAAAAAAGTAA    225
                     ||||.|||||||||.|.|||||.|||
BL03913___ywz    200 AAGTGAAAAAGAAACTCAAAAAATAA    225


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