Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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DNA alignment: BSNT_05760 and BL03912

See Amino acid alignment / Visit BSNT_05760 in genome browser / Return to Orthologue table
########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:27:51
# Commandline: needle
#    -asequence dna-align/BSNT_05760___ywfL.1.5803.seq
#    -bsequence dna-align/BL03912___ywfL.2.5803.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile dna-align/BSNT_05760___ywfL-BL03912___ywfL.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_05760___ywfL-BL03912___ywfL.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_05760___ywfL
# 2: BL03912___ywfL
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 876
# Identity:     631/876 (72.0%)
# Similarity:   631/876 (72.0%)
# Gaps:          60/876 ( 6.8%)
# Score: 2195.5
# 
#
#=======================================

BSNT_05760___      1 ATGGCAAACCAACCGATTGATTTACTGATGCAGCCGAAATGGAGAGTCAT     50
                     ||||||||.||||||||||||.||||.||.|||||||||||||||.||||
BL03912___ywf      1 ATGGCAAAGCAACCGATTGATCTACTCATCCAGCCGAAATGGAGAATCAT     50

BSNT_05760___     51 TGACCAATCCAGTCTCGGCCCTTTATTTGATGCGAAGCAATCCTTCGCAA    100
                     |||||||||||||||||||||.|..||||||||.||.|||||.||.||.|
BL03912___ywf     51 TGACCAATCCAGTCTCGGCCCATATTTTGATGCAAAACAATCATTTGCGA    100

BSNT_05760___    101 TGGATGATACGCTGTGCATGTCCGTCGGAAAAGGCGTGTCGCCGGCGACA    150
                     |.|||||||||||||||...||.|||||.|||||..|.||.||||||||.
BL03912___ywf    101 TAGATGATACGCTGTGCGCTTCTGTCGGGAAAGGTTTATCTCCGGCGACC    150

BSNT_05760___    151 GCGCGCTCATGGGTGCACCACGATACAATTGTCCTTGGAATACAGGATAC    200
                     |||||.||.|||||||||||.||.||.|||||.||.|||||.||||||||
BL03912___ywf    151 GCGCGTTCCTGGGTGCACCATGACACGATTGTGCTCGGAATCCAGGATAC    200

BSNT_05760___    201 ACGCCTCCCGTTTTTGCAGGATGGCATCTCCTTGCTGGA--GAGCGAAGG    248
                     |.|.|||||.|.|||.||.||.||.||.||.|||||.||  .||||  ||
BL03912___ywf    201 AAGGCTCCCTTATTTACAAGAAGGGATTTCATTGCTTGAAGAAGCG--GG    248

BSNT_05760___    249 ATACCGTGTGATCGTACGCAATTCCGGCGGTCTTGCCGTCGTATTGGATG    298
                     .||.|..|..|||||.||||||||||||||.||.||||||||.|||||..
BL03912___ywf    249 CTATCAAGCCATCGTCCGCAATTCCGGCGGACTGGCCGTCGTTTTGGACA    298

BSNT_05760___    299 ACGGTGTTTTAAATATCTCTCTCATATTCGAGGACGAAAAGAAAGGCATC    348
                     .|||.||||||||..|.||.||.||.||..||||..|.||.||.||.||.
BL03912___ywf    299 GCGGGGTTTTAAACGTTTCCCTGATTTTTCAGGATAAGAAAAACGGAATT    348

BSNT_05760___    349 GATATAGACAAAGGATATGAAGCGATGGTCGAGCT-GATGAGACGAATGC    397
                     |||||.||||.|||.||||||||||||.|.||||| |.|.|| |||||||
BL03912___ywf    349 GATATCGACAGAGGCTATGAAGCGATGTTTGAGCTCGTTAAG-CGAATGC    397

BSNT_05760___    398 TGAGACCGTACAACGCAAAGATCGAAGCCTATGAAATTGAAGGGTCTTAT    447
                     ||..|.|.||..|||||...|||||||||||||||||..||||.||.||.
BL03912___ywf    398 TGTCATCCTATGACGCAGCAATCGAAGCCTATGAAATCAAAGGCTCCTAC    447

BSNT_05760___    448 TGTCCCGGCAGCTATGACCTCAGTATAAATGGCAAAAAGTTCGCCGGCAT    497
                     |||||.||.||||.|||..|.||.||....||.|..||.||.||.||.||
BL03912___ywf    448 TGTCCAGGAAGCTTTGATTTGAGCATCGGGGGAAGGAAATTTGCGGGAAT    497

BSNT_05760___    498 CTCTCAGAGACGCGTTCGCGGCGGAGTTGCTGTTCAAATTTATCTCTGTG    547
                     .||.|||||.|||.|..|.||||||||.|||||||||||||||.|.||.|
BL03912___ywf    498 TTCCCAGAGGCGCCTGAGAGGCGGAGTGGCTGTTCAAATTTATTTGTGCG    547

BSNT_05760___    548 CGGATAAAAGCGGCAGTGAAAGGGCCGACTTGATCAGACGATTCTATCAA    597
                     |.|||.|||||||.||.|...|.||.||..||||||.|||.||.||..|.
BL03912___ywf    548 CTGATCAAAGCGGAAGCGGGCGCGCTGAGCTGATCAAACGCTTTTACGAC    597

BSNT_05760___    598 GCGGCGCTGAAAGACAAAC-----AAAACGATAAAAAAGGCGTCTATCCG    642
                     .|.||..|||||||||..|     |||||     |||||.|||.|||||.
BL03912___ywf    598 ACCGCCTTGAAAGACATGCGCGGGAAAAC-----AAAAGCCGTTTATCCC    642

BSNT_05760___    643 GAAATACGTCCGGAAACGATGGCGTC-CTTAAGTGAGCTTCTGCAA-AAA    690
                     ||.||.||.||||||||||||||.|| ||| ..||||||||| ||| .||
BL03912___ywf    643 GATATTCGCCCGGAAACGATGGCTTCGCTT-TCTGAGCTTCT-CAATGAA    690

BSNT_05760___    691 GACATCTCCGTACAAGACTTAATGTTC--GCTTTATTGACGGAATTAAAA    738
                     |||||.||.||.||.|||||.|||.||  ||||  .||||..|..|.|||
BL03912___ywf    691 GACATTTCGGTGCAGGACTTGATGCTCTTGCTT--CTGACACAGCTGAAA    738

BSNT_05760___    739 GCGTTAAGC------ACCCGTCTTTA--------CTCT---GCCGGACTG    771
                     |.|.|..||      |      ||||        ||||   |||.|    
BL03912___ywf    739 GAGCTGGGCGGGGAGA------TTTATCAAGGCCCTCTCACGCCCG----    778

BSNT_05760___    772 TCCATTGATGAGGAAATGGAATTTGAGAAAAACCTCGCCCGGATGGCTGA    821
                       ||  ||.||||||.||   |.||||||||||||.|.|||.|||..|||
BL03912___ywf    779 --CA--GAAGAGGAAGTG---TATGAGAAAAACCTTGTCCGCATGATTGA    821

BSNT_05760___    822 GCGGAATGCAAAGGTATTTGGGTGA-    846
                     .|||||||.||||||.|||||.| | 
BL03912___ywf    822 ACGGAATGAAAAGGTTTTTGGAT-AG    846


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Natto Genome Project Bacillus subtilis subsp. natto str. BEST195

DNA alignment: BSNT_05760 and BL03912

Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
