Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_05763 and BL03905
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:27:52
# Commandline: needle
# -asequence dna-align/BSNT_05763___eutD.1.5803.seq
# -bsequence dna-align/BL03905___eutD.2.5803.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_05763___eutD-BL03905___eutD.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_05763___eutD-BL03905___eutD.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_05763___eutD
# 2: BL03905___eutD
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 974
# Identity: 806/974 (82.8%)
# Similarity: 806/974 (82.8%)
# Gaps: 4/974 ( 0.4%)
# Score: 3334.0
#
#
#=======================================
BSNT_05763___ 1 GTGGCAGATTTATTTTCAACAGTGCAAGAAAAAGTAGCTGGAAAAGACGT 50
|||||||||.|||||.||||||||||.|.|||||||||.|||||||..||
BL03905___eut 1 GTGGCAGATCTATTTACAACAGTGCAGGGAAAAGTAGCAGGAAAAGGAGT 50
BSNT_05763___ 51 TAAAATTGTATTTCCTGAAGGCTTAGACGAGCGTATT-TTAGAAGCGGTC 99
||||||.||||||||.|||||.||.|||||||||||| ||| .|||.|||
BL03905___eut 51 TAAAATCGTATTTCCGGAAGGTTTGGACGAGCGTATTCTTA-CAGCTGTC 99
BSNT_05763___ 100 AGCAAGCTTGCAGGAAACAAAGTGCTGAATCCGATTGTGATCGGCAATGA 149
|.|||..|.||.||||||||.|||.|.||.|||||..|..|.||.||.||
BL03905___eut 100 AACAAATTGGCCGGAAACAACGTGTTAAAGCCGATCCTTGTAGGAAACGA 149
BSNT_05763___ 150 AAATGAGATCCAAGCAAAAGCAAAAGAATTGAACCTTACGCTGGACGGCG 199
..|.||.|||.|||..||||||||.|..|||||..|.||||||||.||||
BL03905___eut 150 GCAGGAAATCAAAGATAAAGCAAACGGGTTGAATTTAACGCTGGATGGCG 199
BSNT_05763___ 200 TTAAGATTTATGATCCTCATACATATGAAGGCATGGAAGACCTTGTACAA 249
||.|.||.||.||||||||||||||||||||.||||||||||||||.||.
BL03905___eut 200 TTGACATATACGATCCTCATACATATGAAGGGATGGAAGACCTTGTTCAG 249
BSNT_05763___ 250 GCATTCGTAGAACGCCGCAAAGGCAAAGCGACAGAAGAACAGGCTCG-CA 298
||.|||||.|||||||||||||||||||||||.|||||.|||||.|| ||
BL03905___eut 250 GCTTTCGTTGAACGCCGCAAAGGCAAAGCGACGGAAGAGCAGGCCCGCCA 299
BSNT_05763___ 299 AAGCGTTATTAGACGAGAACTACTTCGGTACAATGCTGGTGTATAAAGGA 348
||.|.|| ||||||||.||||||||.||.||.|||||.||.||||||||.
BL03905___eut 300 AATCCTT-TTAGACGAAAACTACTTTGGAACGATGCTTGTTTATAAAGGG 348
BSNT_05763___ 349 CTTGCAGACGGACTTGTAAGCGGAGCTGCTCACTCAACTGCTGACACTGT 398
|||||.|||||.|||||.|||||.||.|||||.|||||.||.||.||.||
BL03905___eut 349 CTTGCCGACGGCCTTGTCAGCGGTGCGGCTCATTCAACAGCGGATACGGT 398
BSNT_05763___ 399 CCGCCCGGCTCTTCAAATCATCAAAACAAAAGAAGGCGTGAAAAAGACTT 448
.||||||||.||.|||||.||.||||||||||||||||||||.||.||.|
BL03905___eut 399 TCGCCCGGCGCTGCAAATTATTAAAACAAAAGAAGGCGTGAAGAAAACAT 448
BSNT_05763___ 449 CCGGCGTGTTCATCATGGCTCGCGGAGAAGAGCAATACGTATTCGCAGAT 498
|.|||||.||.||||||||.|||||.||.|||||.||||||||||||||.
BL03905___eut 449 CAGGCGTCTTTATCATGGCGCGCGGCGATGAGCAGTACGTATTCGCAGAC 498
BSNT_05763___ 499 TGCGCGATCAACATTGCGCCTGACAGCCAAGATCTTGCCGAGATTGCGAT 548
||.||||||||||||||||||||||||||.||.|||||.||.||.||.||
BL03905___eut 499 TGTGCGATCAACATTGCGCCTGACAGCCAGGACCTTGCGGAAATCGCAAT 548
BSNT_05763___ 549 CGAAAGTGCCAATACGGCAAAAATGTTCGACATTGAGCCTCGCGTGGCAA 598
|||||||||.||.||.||.||||||||||||||.||.|||||.||.||.|
BL03905___eut 549 CGAAAGTGCGAACACAGCGAAAATGTTCGACATCGAACCTCGTGTCGCCA 598
BSNT_05763___ 599 TGCTCAGCTTCTCTACAAAAGGCTCAGCAAAATCTGATGAAACAGAAAAA 648
||||||||||.||.||||||||.||.||||||||.||.|||||.||||||
BL03905___eut 599 TGCTCAGCTTTTCAACAAAAGGTTCGGCAAAATCAGACGAAACTGAAAAA 648
BSNT_05763___ 649 GTAGCGGATGCAGTGAAAATCGCGAAAGAAAAAGCGCCTGAACTGACACT 698
|||||..|.||.||...||||||.|||||||||||||||||.||.|||||
BL03905___eut 649 GTAGCCAACGCGGTTGCAATCGCAAAAGAAAAAGCGCCTGAGCTTACACT 698
BSNT_05763___ 699 TGACGGCGAATTCCAATTTGATGCTGCATTTGTTCCATCTGTAGCTGAGA 748
|||||||||||||||||||||.||.|||||.|||||.|||||.|||||||
BL03905___eut 699 TGACGGCGAATTCCAATTTGACGCGGCATTCGTTCCGTCTGTCGCTGAGA 748
BSNT_05763___ 749 AAAAAGCGCCGGATTCCGAAATCAAAGGGGACGCTAACGTATTCGTATTC 798
|||||||||||||.||||..||.|||||.||.||.||||||||.||.|||
BL03905___eut 749 AAAAAGCGCCGGACTCCGTCATTAAAGGAGATGCAAACGTATTTGTTTTC 798
BSNT_05763___ 799 CCAAGCCTTGAAGCAGGAAACATCGGCTATAAAATCGCTCAGCGTTTGGG 848
||||||||||||||.||.||.|||||||||||||||||||||||..|.||
BL03905___eut 799 CCAAGCCTTGAAGCGGGGAATATCGGCTATAAAATCGCTCAGCGCCTCGG 848
BSNT_05763___ 849 CAACTTTGAAGCGGTAGGTCCAATCCTGCAAGGTTTAAATATGCCTGTAA 898
|||||||||||||||.|||||.||.||||||||..|.||.||||||||||
BL03905___eut 849 CAACTTTGAAGCGGTCGGTCCGATTCTGCAAGGGCTGAACATGCCTGTAA 898
BSNT_05763___ 899 ACGACCTTTCAAGAGGATGTAACGCTGAAGATGTTTACAATCTCGCATTA 948
|||||||.||.|||||.||.||||||||.||.|||||.|||||.||..|.
BL03905___eut 899 ACGACCTGTCCAGAGGGTGCAACGCTGAGGACGTTTATAATCTTGCGCTG 948
BSNT_05763___ 949 ATTACAGCGGCGCAAGCACTGTAA 972
|||||.|||||.|||||.||||||
BL03905___eut 949 ATTACGGCGGCTCAAGCTCTGTAA 972
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