Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_05813 and BL03895
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:27:53
# Commandline: needle
# -asequence dna-align/BSNT_05813___ung.1.5803.seq
# -bsequence dna-align/BL03895___ung.2.5803.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_05813___ung-BL03895___ung.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_05813___ung-BL03895___ung.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_05813___ung
# 2: BL03895___ung
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 682
# Identity: 527/682 (77.3%)
# Similarity: 527/682 (77.3%)
# Gaps: 8/682 ( 1.2%)
# Score: 1986.0
#
#
#=======================================
BSNT_05813___ 1 TTGAAACAGCTTTTACAAGACAGCTGGTGGAATCAGCTAAAGGAAGAGTT 50
|||||||||.||||..|.||||||||||||.|.|||||.|||||.|||||
BL03895___ung 1 TTGAAACAGATTTTGAATGACAGCTGGTGGCAACAGCTGAAGGACGAGTT 50
BSNT_05813___ 51 TGAGAAACCGTATTATCAAGAGCTCAGAGAAATGCTGAAGCGGGAATACG 100
|||.||.||.|||||||||||.||.||.|||||||||||..||||.||.|
BL03895___ung 51 TGATAAGCCTTATTATCAAGAACTGAGGGAAATGCTGAAAAGGGAGTATG 100
BSNT_05813___ 101 CGGAGCAAACGATTTATCCGGACAGCCG--GGATATTTTCAATGCGCTGC 148
|.||.||.||..|.|||||.| |.||| .|||||.|.||||||..|||
BL03895___ung 101 CTGAACACACCGTATATCCTG--AACCGAACGATATATACAATGCTTTGC 148
BSNT_05813___ 149 ATTATACATCATATGATGATGTCAAGGTCGTCATTCTGGGACAAGATCCG 198
|||||||.||.|||||..||||.||.|||||.|||||.||.|||||.|||
BL03895___ung 149 ATTATACTTCCTATGAAAATGTGAAAGTCGTAATTCTCGGCCAAGACCCG 198
BSNT_05813___ 199 TATCACGGGCCGGGACAGGCTCAAGGTTTAAGCTTCTCTGT-CAAGCCCG 247
||||||||.|||||.|||||.||.||.|||||.||.||.|| ||| ||||
BL03895___ung 199 TATCACGGTCCGGGTCAGGCCCATGGCTTAAGTTTTTCCGTACAA-CCCG 247
BSNT_05813___ 248 GTGTAAAGCAGCCGCCTTCGTTAAAAAATATTTTTCTTGAGCTGCAGCAG 297
|.||.||.|..||||||||.||.||||||||||||.|.||..|||||.|.
BL03895___ung 248 GCGTCAATCCACCGCCTTCTTTGAAAAATATTTTTATAGAATTGCAGAAT 297
BSNT_05813___ 298 GATATCGGGTGCAG-CATCCCGAATCACGGGTCGCTTGTGAGCTGGGCAA 346
||.||| ||.||.| |||||||||||||||.||.||.||.||||||||.|
BL03895___ung 298 GACATC-GGCGCCGACATCCCGAATCACGGTTCTCTCGTCAGCTGGGCTA 346
BSNT_05813___ 347 AGCAAGGCGTTCTTTTGCTGAATACTGTGCTGACAGTAAGGCGCGGACAG 396
|||||||||||||..|||||||.||.||..||||.||.||.||.||.|||
BL03895___ung 347 AGCAAGGCGTTCTGCTGCTGAACACCGTTTTGACCGTGAGACGGGGCCAG 396
BSNT_05813___ 397 GCGAATTCCCATAAGGGAAAAGGCTGGGAGCGACTGACGGACCGAATTAT 446
||.|||||.|||||.||.|||||||||||.|..||.||.||..|.||.||
BL03895___ung 397 GCAAATTCGCATAAAGGGAAAGGCTGGGAACAGCTCACAGATAGTATAAT 446
BSNT_05813___ 447 TGACGTGCTGAGTGAAAGAGAGCGGCCGGTTATCTTTATTTTGTGGGGAC 496
.||.||..|.|...|||||||....|||||..|.||||||.|.|||||.|
BL03895___ung 447 AGATGTTTTAAACAAAAGAGACAAACCGGTCGTTTTTATTCTCTGGGGCC 496
BSNT_05813___ 497 GGCATGCTCAAATGAAAAAAGAACGGATCGACACCTCCAAGCATTTTATC 546
|||||||.|||||||||||||||||.|||||.||.||||||||||||||.
BL03895___ung 497 GGCATGCCCAAATGAAAAAAGAACGAATCGATACATCCAAGCATTTTATT 546
BSNT_05813___ 547 ATTGAATCGACGCATCCCAGCCCGTTTTCTGCGAGAAACGGATTTTTCGG 596
||..|||||.|||||||.||||||||.||.||.||||||||.||||||||
BL03895___ung 547 ATCCAATCGCCGCATCCGAGCCCGTTCTCGGCTAGAAACGGGTTTTTCGG 596
BSNT_05813___ 597 GAGCAGACCGTTTTCCCGGGCGAATGCCTATTTGGAGAAAATGGGAGAGG 646
|||||||||||||||..|.||.|||...||||||||..||||.||.||.|
BL03895___ung 597 GAGCAGACCGTTTTCAAGAGCCAATCAGTATTTGGAACAAATCGGGGATG 646
BSNT_05813___ 647 CGCCGATTGATTGGTGTATTAAGGATTTGTAA 678
.|||||||||.||||...||..|.||.|.|||
BL03895___ung 647 AGCCGATTGACTGGTCCCTTCCGAATCTTTAA 678
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