Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_05834 and BL03873
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:27:55
# Commandline: needle
# -asequence dna-align/BSNT_05834___qoxC.1.5803.seq
# -bsequence dna-align/BL03873___qoxC.2.5803.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_05834___qoxC-BL03873___qoxC.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_05834___qoxC-BL03873___qoxC.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_05834___qoxC
# 2: BL03873___qoxC
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 618
# Identity: 468/618 (75.7%)
# Similarity: 468/618 (75.7%)
# Gaps: 6/618 ( 1.0%)
# Score: 1723.0
#
#
#=======================================
BSNT_05834___ 1 ATGGAACATGCAGAACACGGCAATTCTAACGCGCCTATGGAATATCAATC 50
||||||||||||||||||.|||||||||||||.|||||||||||.|..||
BL03873___qox 1 ATGGAACATGCAGAACACAGCAATTCTAACGCTCCTATGGAATACCGTTC 50
BSNT_05834___ 51 TGAAACCGGCAGACTTAATATTCTCGGGTTTTGGATCTTTTTAGGGGCAG 100
|||||.|||.||..|.|||||.||.||.||||||||.|||.|.||.||.|
BL03873___qox 51 TGAAATCGGAAGGTTGAATATCCTTGGCTTTTGGATTTTTCTTGGAGCGG 100
BSNT_05834___ 101 AAATTGTGTTGTTCTCAACACTATTTGCAACC--TTCTTCGTTCTTAAAA 148
|.||||..||.|||||.||..|||||||.||| |.|| ||||||.|.|
BL03873___qox 101 AGATTGCTTTATTCTCTACGTTATTTGCGACCTATGCT--GTTCTTCATA 148
BSNT_05834___ 149 ACAGAACAGCTGGAGGTGTCTTGCCAGACGAACTATTTGAAGTCAATCTG 198
||||||||||.|||||.||..||||.|..|||||.||.||.|..||.||.
BL03873___qox 149 ACAGAACAGCGGGAGGCGTACTGCCGGCAGAACTGTTCGACGCGAAGCTC 198
BSNT_05834___ 199 GTAATGATTATGACGTTCTTGCTGCTGATCAGCAGCTTTACCTGCGGGAT 248
||..|.||.|||||||||.|||||.|.|..|||||.||.||.|||||.||
BL03873___qox 199 GTTTTAATCATGACGTTCCTGCTGTTAACGAGCAGTTTCACATGCGGCAT 248
BSNT_05834___ 249 CGCTGTTCATGAAATGCGCCGCGGAAGTTTAAAAGGCGTAGTCATTTGGA 298
.||.||.|||||||||||||||||.|||||.||||||||..|.||.||||
BL03873___qox 249 TGCAGTGCATGAAATGCGCCGCGGCAGTTTGAAAGGCGTGATGATCTGGA 298
BSNT_05834___ 299 CAATTATCACTCTTCTTCTCGGTGCCGGCTTCGTCGGATGCGAGATCAAC 348
..||.||.||.||..|.||||||||.|||||.|||.|.|..|||.|..|.
BL03873___qox 299 TGATCATTACCCTGTTGCTCGGTGCTGGCTTTGTCAGCTATGAGCTTTAT 348
BSNT_05834___ 349 GAGTTTGTTCACTATGTACATGAAGGAGCGGCTCTCAGTACAAGTGCGTT 398
|||||...|||.||||||||.|||||.||..||.|....||||||||.|.
BL03873___qox 349 GAGTTCAATCATTATGTACACGAAGGTGCCACTTTATCGACAAGTGCTTA 398
BSNT_05834___ 399 CTGGTCTGGATTCTTTGTTTTACTTGGAACTCACGGAACT-CACGTAACA 447
||||||.|.||||||||||.||.|.|||||.||||| ||| ||||||.|.
BL03873___qox 399 CTGGTCAGCATTCTTTGTTCTATTGGGAACCCACGG-ACTGCACGTATCG 447
BSNT_05834___ 448 ATCGGGATTTTCTGGATCACAGGAATTCTGATTCAGTTGAAGAAACGCGG 497
||.||.||.||||||||.|..||.||..||.|||||..|||.||.|||||
BL03873___qox 448 ATTGGTATCTTCTGGATTATCGGCATATTGCTTCAGACGAAAAAGCGCGG 497
BSNT_05834___ 498 CTTAACTCCGCAAACTTCATCTAAAATCTTTATCTCAAGCTTGTACTGGC 547
|.|.||.||||||||.||..||||..|.|||||||||||.|||||.||||
BL03873___qox 498 CCTCACCCCGCAAACGTCTGCTAAGCTGTTTATCTCAAGTTTGTATTGGC 547
BSNT_05834___ 548 ACTTCTTAGATGTTGTATGGATTTTCATCTTTACAGGTGTCTATCTCATG 597
||||||||||.||.||||||||.|||||||||||.|||||||||.|.||.
BL03873___qox 548 ACTTCTTAGACGTGGTATGGATCTTCATCTTTACCGGTGTCTATTTGATA 597
BSNT_05834___ 598 GGATTGGGGGGTCTGTAA 615
||.||||.|..|.|.|||
BL03873___qox 598 GGGTTGGTGAATGTATAA 615
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