Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_05835 and BL03872
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:27:55
# Commandline: needle
# -asequence dna-align/BSNT_05835___qoxB.1.5803.seq
# -bsequence dna-align/BL03872___qoxB.2.5803.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_05835___qoxB-BL03872___qoxB.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_05835___qoxB-BL03872___qoxB.aln
########################################
#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_05835___qoxB
# 2: BL03872___qoxB
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 1965
# Identity: 1571/1965 (79.9%)
# Similarity: 1571/1965 (79.9%)
# Gaps: 30/1965 ( 1.5%)
# Score: 6184.5
#
#
#=======================================
BSNT_05835___ 1 ATGAAATTCAAATGGGACGAATTTTTCGTAACTGGTGACCCATTAATTCT 50
|||||.||.||||||||||||||..|..|.||.|||||||||||||||||
BL03872___qox 1 ATGAATTTGAAATGGGACGAATTCATAATTACAGGTGACCCATTAATTCT 50
BSNT_05835___ 51 GGGCGCACAAGTTTCCATTGCGCTTTCAACCATTGCCATTATTTTTGTAC 100
.||.|||||..||||||||..||||.|..|.|||||.||..|.|||||.|
BL03872___qox 51 TGGAGCACAGATTTCCATTTTGCTTACTTCAATTGCAATCGTATTTGTGC 100
BSNT_05835___ 101 TGACTTACTTTAAAAAGTGGAAATGGCTGTGGTCTGAATGGATAACTACT 150
||||.|||||.|||||.|||||||||||.|||...||.|||||.||.||.
BL03872___qox 101 TGACATACTTCAAAAAATGGAAATGGCTTTGGAGAGAGTGGATTACCACC 150
BSNT_05835___ 151 GTTGACCATAAAAAACTCGGAATCATGTATATTATATCTGCTGTAATTAT 200
||.||.||||||....|.|||||||||||.||.||..|.||.||.|||||
BL03872___qox 151 GTCGATCATAAACGTTTAGGAATCATGTACATCATTGCCGCAGTCATTAT 200
BSNT_05835___ 201 GTTATTCCGCGGCGGTGTCGACGGTCTGATGATGCGTGCCCAGCTAGCGC 250
|||.||||||||||||||||||||..|.|||||||||||||||||..|||
BL03872___qox 201 GTTCTTCCGCGGCGGTGTCGACGGGTTAATGATGCGTGCCCAGCTCACGC 250
BSNT_05835___ 251 TTCCGAATAACAGTTTTTTAGACTCAAACCACTATAATGAAATTTTTACA 300
||||.||||||.|.||||||||.||.|||||||||||||||.|.|||||.
BL03872___qox 251 TTCCTAATAACGGCTTTTTAGATTCCAACCACTATAATGAAGTATTTACG 300
BSNT_05835___ 301 ACTCACGGTACAATCATGATCATCTTCATGGCGATGCCG-TTCTTAATCG 349
|||||||||||.||||||||||||||||||||||||||| ||||||.|.|
BL03872___qox 301 ACTCACGGTACGATCATGATCATCTTCATGGCGATGCCGTTTCTTATTGG 350
BSNT_05835___ 350 GTCTTATCAACGTTGTTGTGCCTCTTCAAATCGGTGCCCGCGACGTTGCG 399
|| |.||.|||||.||.||.||.||||||||||||||.||.||||||||.
BL03872___qox 351 GT-TAATGAACGTGGTCGTACCGCTTCAAATCGGTGCGCGGGACGTTGCT 399
BSNT_05835___ 400 TTCCCTTACTTGAACAACCTGAGCTTCTGGACGTTCTTTGTAGGGGCGAT 449
|..|||||||||||||||.|||||||||||||.|||.|.||.||.|||||
BL03872___qox 400 TATCCTTACTTGAACAACTTGAGCTTCTGGACCTTCATGGTCGGAGCGAT 449
BSNT_05835___ 450 GCTTTTCAATATTTCTTTCGTTATCGGAGGTTCTCCGAACGCAGGCTGGA 499
|||.||.||.|||||.|||||.|||||.||.||.|||||.|||||.||||
BL03872___qox 450 GCTGTTTAACATTTCATTCGTCATCGGCGGATCGCCGAATGCAGGATGGA 499
BSNT_05835___ 500 CGAGTTATATGCCGCTTGCAAGTAACGACATGAGCCCTGGGCCGGGTGAG 549
||..|||.||||||||||||.|.|||||..||||.|||||.||.||..||
BL03872___qox 500 CGGCTTACATGCCGCTTGCAGGCAACGAGCTGAGTCCTGGACCTGGACAG 549
BSNT_05835___ 550 AACTACTACCTCCTCGGACTTCAGATTGCCGGTATCGGTACCCTGATGAC 599
|||||.|||.|.||||||||||||||.||.|||||||||||.||..|.||
BL03872___qox 550 AACTATTACTTGCTCGGACTTCAGATCGCGGGTATCGGTACGCTTCTCAC 599
BSNT_05835___ 600 AGGGATCAACTTTATGGTAACAATCTTAAAAATGAGAACAAAAGGCATGA 649
.|||||||||||||||||.||.|||.|.||||||.|.|||||||||||||
BL03872___qox 600 CGGGATCAACTTTATGGTTACCATCCTGAAAATGCGTACAAAAGGCATGA 649
BSNT_05835___ 650 CATTAATGCGTATGCCGATGTTCACATGGACAACACTGATCACAATG-GT 698
|..||..|||.||||||||||||||.||||||||.|||||||| .|| ||
BL03872___qox 650 CTCTATGGCGGATGCCGATGTTCACTTGGACAACGCTGATCAC-TTGTGT 698
BSNT_05835___ 699 TATTATCGTGTTTGCGTTCCCTGTACTT-ACAGTAGCATTGGCACTTTTA 747
.||||||.|.||.||.|||||||| ||| |||||.||.|||||.||..|.
BL03872___qox 699 GATTATCATTTTCGCCTTCCCTGT-CTTGACAGTGGCTTTGGCGCTGATG 747
BSNT_05835___ 748 TCATTTGATCGTTTGTTCGGCGCTCACTTTTTCACATTGG-AAGCAGGCG 796
.|||||||.||.||||||||..|...|||||||||.|||| ||.| ||||
BL03872___qox 748 ACATTTGACCGCTTGTTCGGAACAGCCTTTTTCACTTTGGCAAAC-GGCG 796
BSNT_05835___ 797 GTATGCCGATGCTTTGGGCTAACTTGTTCTGGATTTGGGGACATCCTGAA 846
|||||||||||||.|||||.|||.|||||||||||||||||||||||||.
BL03872___qox 797 GTATGCCGATGCTATGGGCGAACCTGTTCTGGATTTGGGGACATCCTGAG 846
BSNT_05835___ 847 GTATATATCGTTATTCTTCCGGCGTTTGGTATTTTCTCAGAAATCATCTC 896
||.||.|||||||||.|.||.||.||.||||||||.|||||||||||..|
BL03872___qox 847 GTTTACATCGTTATTTTGCCTGCTTTCGGTATTTTTTCAGAAATCATTGC 896
BSNT_05835___ 897 AAGCTTTGCAAGAAAACAATTGTTTGGTTACAAAGCGATGGTTGGTTCTA 946
||..|||||.|||||.||..||||.||.||.||||||||||||..|||.|
BL03872___qox 897 AACATTTGCGAGAAAGCAGCTGTTCGGCTATAAAGCGATGGTTTATTCCA 946
BSNT_05835___ 947 TTATCGCCATCTCTGTATTGAGTTTCTTAGTTTGGACT-CACCACTTCTT 995
||.|.||.||.||.||..|.||.||..|.|||||| || ||||||||.||
BL03872___qox 947 TTGTGGCGATTTCGGTTCTCAGCTTTATCGTTTGG-CTGCACCACTTTTT 995
BSNT_05835___ 996 CACAATGGGGAACAGTGCGTCCGTTAACTCATTCTTCTCAATTACAACAA 1045
|||||||||.|||||.|||.|.||.|||||.||||||||.|||||.||||
BL03872___qox 996 CACAATGGGCAACAGCGCGGCGGTCAACTCGTTCTTCTCGATTACGACAA 1045
BSNT_05835___ 1046 TGGCAATCTCAATCCCAACCGGGGTTAAAATCTTTAACTGGCTCTTTACA 1095
||||.||.||..|.||.||||||||||||||||||||||||||.||.||.
BL03872___qox 1046 TGGCGATATCGGTGCCGACCGGGGTTAAAATCTTTAACTGGCTGTTGACG 1095
BSNT_05835___ 1096 ATGTATAAAGGCCGAATCAGCTTTACAACACCTATGCTGTGGGCGCTTGC 1145
.||.||..||||.||||.|...|.|||||.||.|||||||||.|||||||
BL03872___qox 1096 CTGCATCGAGGCAGAATTAAAATCACAACGCCGATGCTGTGGTCGCTTGC 1145
BSNT_05835___ 1146 GTTCATTCCTAACTTCGTTATCGGCGGGGTTACAGGGGTTATGCTTGCGA 1195
.||.|||||.||||||||.||||||||.|||||.||.|||||||||||||
BL03872___qox 1146 ATTTATTCCGAACTTCGTCATCGGCGGTGTTACGGGCGTTATGCTTGCGA 1195
BSNT_05835___ 1196 TGGCAGCAGCGGATTATCAATACCATAATACGTACTTCCTTGTATCTCAC 1245
|||||||.||||||||||||||.||.||.||.||||||||.|||||.|||
BL03872___qox 1196 TGGCAGCTGCGGATTATCAATATCACAACACATACTTCCTCGTATCGCAC 1245
BSNT_05835___ 1246 TTCCACTATGTGCTGATTGCGGGTACTGTATTTGCTTGTTTCGCCGGATT 1295
||||||||.||||||||.|||||||||||.|||||.||||||||||||||
BL03872___qox 1246 TTCCACTACGTGCTGATCGCGGGTACTGTGTTTGCATGTTTCGCCGGATT 1295
BSNT_05835___ 1296 TATTTTCTGGTATCCAAAAATGTTCGGCCACAAGCTGAACGAAAGAATTG 1345
.||.|||||||||||.|||||||||||.|||||.|||||||||.|.||.|
BL03872___qox 1296 GATCTTCTGGTATCCGAAAATGTTCGGTCACAAACTGAACGAACGCATCG 1345
BSNT_05835___ 1346 GAAAATGGTTCTTCTGGATCTTTATGATCGGG-TTCAATATTTGTTTCTT 1394
|||||||||||||||||.|.||.|||| |||| ||.||.||.||||||||
BL03872___qox 1346 GAAAATGGTTCTTCTGGCTGTTCATGA-CGGGCTTTAACATCTGTTTCTT 1394
BSNT_05835___ 1395 CCCGCAATATTTCTTGGGGCTTCAAGGCATGCCTCGCCGTATTTACACAT 1444
||||...||||||.|.||..|.||.||.||||||||||||||||||||||
BL03872___qox 1395 CCCGATGTATTTCCTTGGATTGCAGGGAATGCCTCGCCGTATTTACACAT 1444
BSNT_05835___ 1445 ACGGA-CCGAATGACGGCTGGACAACATTGAACTTTATCTCAACAGTCGG 1493
||||| |.||| |||||||||||..||||||||.|.||..|.|||.||||
BL03872___qox 1445 ACGGAGCAGAA-GACGGCTGGACTGCATTGAACATGATTGCGACATTCGG 1493
BSNT_05835___ 1494 AGCTTTCATGATGGGTGTAGGATTCTTAATCCTTTGCTATAACATCTACT 1543
.||.||..||||||..|.|||||||.|..|.||.|||||||||||.|.||
BL03872___qox 1494 CGCATTGCTGATGGCCGCAGGATTCATCGTTCTCTGCTATAACATTTTCT 1543
BSNT_05835___ 1544 ACAGCTTCCGTTACTC--TACTCGTGAAATCAGCGGAGATTCATGGGGTG 1591
|||||||||||.|.|| .||.||.|.||||| ||||||.|.|||||..
BL03872___qox 1544 ACAGCTTCCGTCATTCAAAACGCGAGGAATCA--GGAGATGCTTGGGGAA 1591
BSNT_05835___ 1592 TGGGACGTACGCTTGATTGGGCGACTTCTTCTGCGATTCCGCCGCATTAC 1641
||||.||.||||||||.|||||.||.|||||||||||.||||||||.||.
BL03872___qox 1592 TGGGTCGCACGCTTGAATGGGCTACATCTTCTGCGATCCCGCCGCACTAT 1641
BSNT_05835___ 1642 AACTTTGCGGTGCTTCCTGAAGTCAAATCTCAAGATGCATTCCTGCATAT 1691
|||||||||||.||.|||||.||||..||.|..||.|||||...|||.||
BL03872___qox 1642 AACTTTGCGGTTCTGCCTGAGGTCACTTCACCTGACGCATTTGCGCAAAT 1691
BSNT_05835___ 1692 GAAAGAAGAAAAAACT-----GAATTATACCCTGAAAGCAAATTCAAGAA 1736
|||.|||||.|| | ||.|.|| |||||||||||.||.||.||
BL03872___qox 1692 GAAGGAAGACAA---TGTCGAGATTCAT--CCTGAAAGCAAGTTTAAAAA 1736
BSNT_05835___ 1737 AATCCATATGCCAAGCAACTCAGGCAGACCGTTCTTTATGTC-TGTTGCC 1785
.||.||||||||.|||||.||||||.|.|||||..|.||||| |..|| |
BL03872___qox 1737 GATTCATATGCCGAGCAATTCAGGCCGTCCGTTTATCATGTCATTATG-C 1785
BSNT_05835___ 1786 TTCGGTCTCGCTGGCTTTGGACTTGTCTTTGAATGGTACTGGATGGGCGT 1835
|||||..|.|||||.||.||.||||||||||||||||.|||||||||..|
BL03872___qox 1786 TTCGGATTTGCTGGATTCGGGCTTGTCTTTGAATGGTTCTGGATGGGAAT 1835
BSNT_05835___ 1836 AGTCGGATTGATCGGAGTCCTGCTCTGCATGGTTCTGCGTTCATTCGAAT 1885
.|||||..|||||||.||..|.|||||.|||.||||.||||||||.||||
BL03872___qox 1836 CGTCGGTCTGATCGGTGTATTCCTCTGTATGATTCTTCGTTCATTTGAAT 1885
BSNT_05835___ 1886 ACGACAACGGCTACTACATTAGTGTTGATGAAATAAAAGAGACGGAAAGA 1935
|.|||.||||||||||..|.||||||||.||||||||||||||.|||.||
BL03872___qox 1886 ATGACGACGGCTACTATGTAAGTGTTGAGGAAATAAAAGAGACTGAACGA 1935
BSNT_05835___ 1936 AAGATTTCCGAATAA 1950
||||.|.||.|.|||
BL03872___qox 1936 AAGAATGCCAAGTAA 1950
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