Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_05903 and BL03842
See
Amino acid alignment /
Visit
BSNT_05903 in genome browser /
Return to
Orthologue table
########################################
# Program: needle
# Rundate: Mon 8 Mar 2010 06:27:59
# Commandline: needle
# -asequence dna-align/BSNT_05903___licC.1.5803.seq
# -bsequence dna-align/BL03842___licC.2.5803.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_05903___licC-BL03842___licC.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_05903___licC-BL03842___licC.aln
########################################
#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_05903___licC
# 2: BL03842___licC
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 1383
# Identity: 1009/1383 (73.0%)
# Similarity: 1009/1383 (73.0%)
# Gaps: 54/1383 ( 3.9%)
# Score: 3473.0
#
#
#=======================================
BSNT_05903___ 1 GTGAATAAAGTCAAT-CAGATCTTAGAAGAAAAGGTCATGCCTATAGCGG 49
|||||.||..|.||| || .|.|||||.||.|||.|||||||..|.||.|
BL03842___lic 1 GTGAACAAGTTTAATGCA-TTTTTAGAGGAGAAGATCATGCCGGTTGCCG 49
BSNT_05903___ 50 GAAGAATTGCGGGACAGCGTCATTTGCAGGCGCTGCGTGATGGTATCATC 99
|.||||||||.|..|||||.|||||||||||.||..|.||.||.||.||.
BL03842___lic 50 GCAGAATTGCCGCCCAGCGCCATTTGCAGGCTCTCAGAGACGGCATTATT 99
BSNT_05903___ 100 CTCACGATGCCCCTGATTATCATCGGTTC-CTTTTTCCTCATCATTGGCA 148
||.||.|||||..|.||.||.|||||.|| ||.||| |||||..|.|.||
BL03842___lic 100 CTGACCATGCCATTAATCATTATCGGATCGCTGTTT-CTCATTTTAGCCA 148
BSNT_05903___ 149 ACCTCCCGATCCCGGGATACGCTGAGTTTATGGCAAAAACGTTTGGCAGC 198
|..|.|||||.||||||||..|.||.||.|||||....|..||.||| |.
BL03842___lic 149 ATTTGCCGATTCCGGGATATCCGGAATTCATGGCGGGGATTTTCGGC-GA 197
BSNT_05903___ 199 TC-CTGGTCTGAAAAACTGGCCTACCCAGTCGACGCGACCTTTGAAATTA 247
|| .|||.||||.|||.|...|||.||.||..|.|..|.||||||.||||
BL03842___lic 198 TCAATGGGCTGAGAAATTAAGCTATCCGGTTAATGTCAGCTTTGACATTA 247
BSNT_05903___ 248 TGGGTCTTGTCGCCGCGTTCGGCATCGCCTACCGGCTCGCCGAGAAATAC 297
|||..||..|||||.||||.||||||||||||||.||.||.||||||||.
BL03842___lic 248 TGGCGCTGATCGCCACGTTTGGCATCGCCTACCGTCTGGCGGAGAAATAT 297
BSNT_05903___ 298 GGTGTTGATGCCTTGTCGGCCGGAGCCATTTCCCTTGCGGCATTTTTATT 347
|.|.|.||||||.||||..|.||.||||||.||.|.||.||.|||.|..|
BL03842___lic 298 GATATCGATGCCCTGTCATCGGGCGCCATTGCCGTAGCAGCTTTTCTGCT 347
BSNT_05903___ 348 AGCAACACCTTATCAAGTGCCTTTTATGCCGGATGGCGCGACGAAAGAAA 397
.||.||.||.||.||..|.||.||.|..||.||.|||||.||..|.||||
BL03842___lic 348 TGCGACCCCCTACCAGATTCCGTTCACACCCGAAGGCGCAACAGAGGAAA 397
BSNT_05903___ 398 TCATGGTTGGC-GGCGGGATTCCGCTTTCGCTCATGGGAAGCAAAGGCTT 446
|..|.| ||.| |||||.||.|||.||||..|.||||||||||||||..|
BL03842___lic 398 TTTTAG-TGTCAGGCGGCATCCCGATTTCATTAATGGGAAGCAAAGGTCT 446
BSNT_05903___ 447 ATTTGTCGCCATGATTATCGCAATGGTGTCCACAGAGATTTACCGC---- 492
.|||||||.||||.|.|||||.|||.|.|||||.|||.||||||||
BL03842___lic 447 GTTTGTCGGCATGCTGATCGCGATGTTCTCCACTGAGGTTTACCGCTGGG 496
BSNT_05903___ 493 -CTTATTATCCAGCGCA-ATTTAGTCTTCAAAATGCCGGACGGTGTCCCG 540
|.| ||.|..|.| ||| |||.||||||||||||||||.||.|||
BL03842___lic 497 TCGT----TCAAAAGGATATT--GTCGTCAAAATGCCGGACGGCGTACCG 540
BSNT_05903___ 541 CCGGCGGTAAGCAAGTCATTTGTCGCGTTAATCCCCGGCTTTGCCGTCAT 590
|||||.||.|||||.||||||.||||..|.||.||.||.||.|||||.||
BL03842___lic 541 CCGGCTGTCAGCAAATCATTTATCGCTCTGATTCCGGGATTCGCCGTTAT 590
BSNT_05903___ 591 CTTCCTGATTTGGGCAGCCCGGCTGATTGTTGAAGCGACACCGTTTGAAA 640
|..|..|||.|||||.|||||.||..|..|||||..|||.||||||||||
BL03842___lic 591 CGGCTCGATCTGGGCGGCCCGCCTTTTAATTGAAATGACGCCGTTTGAAA 640
BSNT_05903___ 641 GCCTTCATAATATTGTAAGCGTTTTATTGGGGACTCCGCTTTCCATTCTG 690
||||.||||||.|.||.|.|||..|.|||||.||.||.||||||.|.||.
BL03842___lic 641 GCCTCCATAATGTCGTCAACGTCCTTTTGGGAACGCCTCTTTCCGTCCTT 690
BSNT_05903___ 691 GGAGGAAGCCTTGGAGGAAGCCTTGTCGCCGAAGCCGTCAAAATGCTTTT 740
||.||.||.||.||.|||||||||.|.||||||.|.||.||||||||..|
BL03842___lic 691 GGCGGCAGTCTCGGCGGAAGCCTTATTGCCGAAACTGTGAAAATGCTGCT 740
BSNT_05903___ 741 ATGGGCCTGCGGCCTTCACGGTGCAAACATTGTCGGCGGCGTCATGGCAC 790
.|||.|||||||||||||.||.|||||||||||||||||.||.|||.|.|
BL03842___lic 741 GTGGTCCTGCGGCCTTCATGGAGCAAACATTGTCGGCGGAGTGATGTCGC 790
BSNT_05903___ 791 CGATTTGGTACGGCGCAATGGATGCCAACCGGATCGCCTTCCAAGCCGGT 840
||||.||||||||.||.|||||.|..|||||..||||.|||||||||||.
BL03842___lic 791 CGATCTGGTACGGAGCGATGGACGAAAACCGTCTCGCTTTCCAAGCCGGA 840
BSNT_05903___ 841 GAGGAGCTTCCTAAGATTTTCACCCAGCAATTTTTCGATATCTGGGTCAA 890
||.|.|||.||.||.||.||.||...|||.|||||.||.||.|||.||||
BL03842___lic 841 GAAGCGCTCCCGAACATATTTACGACGCAGTTTTTTGAGATTTGGATCAA 890
BSNT_05903___ 891 TATCGGCGGAAGCGGCGCCACATTGGCACTGGTTGTCACGATGTTCCTGC 940
.||||||||.||||||||.||.|||||..||||..|.||||||||.||..
BL03842___lic 891 CATCGGCGGCAGCGGCGCTACTTTGGCTTTGGTCATTACGATGTTTCTTA 940
BSNT_05903___ 941 GCGCCCGAAGCAAACAAATGAAGCAGCTCGGGAAGCTTGCGGTCGGACCG 990
|.||.||||||||.||||||||.||||||||.|..||.||..||||.||.
BL03842___lic 941 GGGCGCGAAGCAAGCAAATGAAACAGCTCGGCAGACTCGCCATCGGCCCC 990
BSNT_05903___ 991 GCCATCTTCAATATTAACGAACCGATTATATTCGGAATGCCGATCGTCAT 1040
||..|.||.||.||.||||||||||||||.|||||.||||||||||||||
BL03842___lic 991 GCTGTTTTTAACATCAACGAACCGATTATCTTCGGCATGCCGATCGTCAT 1040
BSNT_05903___ 1041 GAACCCAATGCT-CTTACTTCCGTTTATCATCACACCGCT--TG-TCACA 1086
||||||.||||| ||.| |.|||||.|||.|..|.||||| || |.|.|
BL03842___lic 1041 GAACCCGATGCTGCTGA-TCCCGTTCATCGTGTCGCCGCTGCTGATGATA 1089
BSNT_05903___ 1087 GTGACACTTACGTACATCGGAATGAGCACCGGCCTTGTCGCAAAACCGGC 1136
..|.|| ||.||.||.|||||||||||.||.|||||.|||||.|||||
BL03842___lic 1090 ACGGCA---ACCTATATTGGAATGAGCACAGGTCTTGTTGCAAAGCCGGC 1136
BSNT_05903___ 1137 GGGTATCGCAGTGCCGTGGACCATGCCGCCGATCTTTTCAGGCTATTTGG 1186
.||.||.||.|||||||||||.||||||||...||||||.||.|||||||
BL03842___lic 1137 TGGGATTGCCGTGCCGTGGACGATGCCGCCCGGCTTTTCCGGATATTTGG 1186
BSNT_05903___ 1187 CGACTGGAGGAAAAGTCTCAGGCGCGGTCATGCAAGC-CATTAA--TATT 1233
|.||.|||||.|||.|.||.||.|||||||||| ||| .||.|| |.||
BL03842___lic 1187 CAACAGGAGGGAAAATTTCCGGAGCGGTCATGC-AGCTGATCAATCTGTT 1235
BSNT_05903___ 1234 GCCGTGTCCTTTGTTGTCTACTATCCATTCTTCAGAATGTGGGATAAGCA 1283
| .|.||.|||||.||.||||||||.|||||.||||||||||||||.||
BL03842___lic 1236 G--ATCTCGTTTGTCGTATACTATCCGTTCTTTAGAATGTGGGATAAACA 1283
BSNT_05903___ 1284 GAAGCTGAAAGAAGAAAACGATCTGGAG-CTGGTCAAAACGCCTGC-AGC 1331
.||||||||||||||.|.|||.|||||| |.|| ||||.|||| |||
BL03842___lic 1284 AAAGCTGAAAGAAGAGAGCGAACTGGAGACCGG----AACGGCTGCAAGC 1329
BSNT_05903___ 1332 ATCAGAT-GACAAAGAAGCGGCTC--TGTAG-- 1359
||| |.||| |.|.|| ||||.
BL03842___lic 1330 ----GATGGTCAA-----CAGGTCAGTGTATAG 1353
#---------------------------------------
#---------------------------------------
Copyright (C) Natto Genome Project, 2009-2010. All rights reserved.