Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_02126 and BL03831
See
Amino acid alignment /
Visit
BSNT_02126 in genome browser /
Return to
Orthologue table
########################################
# Program: needle
# Rundate: Mon 8 Mar 2010 06:23:36
# Commandline: needle
# -asequence dna-align/BSNT_02126___xpf.1.5803.seq
# -bsequence dna-align/BL03831___xpf.2.5803.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_02126___xpf-BL03831___xpf.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_02126___xpf-BL03831___xpf.aln
########################################
#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_02126___xpf
# 2: BL03831___xpf
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 549
# Identity: 356/549 (64.8%)
# Similarity: 356/549 (64.8%)
# Gaps: 84/549 (15.3%)
# Score: 1090.0
#
#
#=======================================
BSNT_02126___ 1 ATGCAAGACTTACTATTTGAATATAAACGCACGCTCAAACAAACAAGAAT 50
|||.||||.||.||.||.|||||||||.|..||||.|| |||||.|||
BL03831___xpf 1 ATGGAAGATTTGCTTTTCGAATATAAAAGAGCGCTGAA--AAACACGAA- 47
BSNT_02126___ 51 ACAA---TATAAACCGCTCGCTGAGGCAGATGAATCCGTGCTCTCAGCTG 97
|.|| |||||.|| || |...|||||||...|.|||..|.||||
BL03831___xpf 48 AAAATTGTATAAGCC-----CT-ATCAAGATGAACAAGGGCTGACGGCTG 91
BSNT_02126___ 98 AAGAGCTGAAGGATAAAAAAATCATCAGAAATATGATTACTGATCTTGAA 147
||.|||||||.|||||||||.|.||||||||.|||||.||.|||.|.|||
BL03831___xpf 92 AACAGCTGAATGATAAAAAACTGATCAGAAACATGATGACCGATTTGGAA 141
BSNT_02126___ 148 TATGTAACAGAATGGCTTGAAAAAGGAAGGCAGCCCGGCATCAGACGGGC 197
|||||.|..||.|||||||||||.|||||..|.||.||.|||||||||||
BL03831___xpf 142 TATGTGATCGACTGGCTTGAAAACGGAAGAGAACCTGGAATCAGACGGGC 191
BSNT_02126___ 198 GATTGACCGGCGTGATGCCTACCAGCGGCTGATGATCAAGGACCCGAGAA 247
|||||||.||||.||..|.||..|||||.||.|..|.||.||.|||.|.|
BL03831___xpf 192 GATTGACAGGCGCGACTCTTATAAGCGGATGCTCCTGAAAGATCCGCGGA 241
BSNT_02126___ 248 TCATCGAATCATTTTC----CAGCGCTATGATG--TTTGAGCCGG---AC 288
|||||||..|.||||| |||.| || |||||.|||| |.
BL03831___xpf 242 TCATCGACACGTTTTCAGAACAGAG------TGCATTTGAACCGGCTCAG 285
BSNT_02126___ 289 GGACAGGTATCAGAAGAAGACAGAGAGAGAATTCGAGAAGCATTAGCCCT 338
| |.||.||||.|.|.||.|.||...|.||| |.||.|||.||
BL03831___xpf 286 G---AAGTGTCAGCATACGATAAAGCCCGGATT------GAATCAGCGCT 326
BSNT_02126___ 339 GT------TAACGGACA-GAGAAAAGGAAATGTT--TTTGCTGCATAAGG 379
|| |.|||| || |.|||||.|||||.|| ||| |.|||||||
BL03831___xpf 327 GTCTGCCCTTACGG-CACGCGAAAAAGAAATCTTCATTT--TACATAAGG 373
BSNT_02126___ 380 TAGAATGTTTTTCTTATGAACGGATCGCCGATCTTCTCGGCGTAAAAAAA 429
|.|||...|||||.|||||.|||||.||||...|.||||||.|.|||||.
BL03831___xpf 374 TCGAACAGTTTTCCTATGAGCGGATTGCCGCCATGCTCGGCATCAAAAAG 423
BSNT_02126___ 430 TCGACAGTGCAAACGACGATTAAACGGGCG-AGTTTAAAGAT-GCAAAGA 477
||.||.||.|||||.|...|.||||||||| ||.|.||| || ||.|| |
BL03831___xpf 424 TCTACTGTTCAAACCAATGTGAAACGGGCGCAGCTGAAA-ATCGCGAA-A 471
BSNT_02126___ 478 CAGCAGGAAGAAATGAATCGATCACTTGCCT---GA------------- 510
||| |||||..| |||| ||
BL03831___xpf 472 CAG-------------ATCGAAAA---GCCTCTCGATTGTATGGCATAA 504
#---------------------------------------
#---------------------------------------
Copyright (C) Natto Genome Project, 2009-2010. All rights reserved.