Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_02135 and BL03824
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:23:37
# Commandline: needle
# -asequence dna-align/BSNT_02135.1.5803.seq
# -bsequence dna-align/BL03824___yqbG.2.5803.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_02135-BL03824___yqbG.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_02135-BL03824___yqbG.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_02135
# 2: BL03824___yqbG
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 404
# Identity: 267/404 (66.1%)
# Similarity: 267/404 (66.1%)
# Gaps: 49/404 (12.1%)
# Score: 749.5
#
#
#=======================================
BSNT_02135 1 ATGCTCATTGAAC-CGACTGACG-TAGCCTCC--TATTCGGTCTA-TGAT 45
|||| |||.| ||.|.|||| ||.|.||| |||||.|| || |||.
BL03824___yqb 1 ATGC----TGATCACGCCCGACGATATCATCCAATATTCCGT-TATTGAA 45
BSNT_02135 46 CGGGTGAAAAACAGGCCGGAAGAGCTGCTGGCG-CAGGATATCATCGAGG 94
...|||||||||.|||||.|.||..|||| ||| |||||||||.|.||.|
BL03824___yqb 46 GCCGTGAAAAACCGGCCGCAGGAATTGCT-GCGTCAGGATATCCTTGAAG 94
BSNT_02135 95 CGGAAGCAGAAGCGGCTCTCATCACGGGCCACCGCTTTGAAGACAGCTTG 144
|.|||||.|||||.|..|..||.|||||.|||||.|||..||| ||
BL03824___yqb 95 CTGAAGCGGAAGCCGAGCAGATAACGGGGCACCGTTTTACAGA-----TG 139
BSNT_02135 145 -----TATGATCCGCTGCCCGGCAAGGTGAAGTTGGCTTTAGTAAAGCTT 189
||||||||||||||.|..||||..|.|.|.|||||..|..||||.
BL03824___yqb 140 AAAAATATGATCCGCTGCCGGAAAAGGCAAGGCTCGCTTTGCTGCAGCTG 189
BSNT_02135 190 GCCCAGTATTTTGCGCTTG-TCAACAGCGATGAATCTGCCTCATCAA--G 236
||.|||||.||||| .||| ..|||.|.|||||||| .||..|.|| |
BL03824___yqb 190 GCACAGTACTTTGC-ATTGAAAAACGGTGATGAATC--GCTTTTGAAAGG 236
BSNT_02135 237 CTATCAGTCTGAGAAAATGGGGGATTATTCCTACACGGTTTCCGGAGAA- 285
|||..|.|||||||||.||||.||.||.|||||.|||.|||| .||||
BL03824___yqb 237 CTACAAATCTGAGAAATTGGGAGACTACTCCTATACGCTTTC--AAGAAG 284
BSNT_02135 286 -GGCGGCATTCAGCG--GCCAGAGGTATATCATTTGCTCGAGGAGTTTAT 332
||.|||.| ||.| |||.||.||.|||.|..|||||||.||.|||||
BL03824___yqb 285 CGGAGGCCT--AGTGAAGCCCGACGTCTATAAACTGCTCGAAGAATTTAT 332
BSNT_02135 333 CACGCCGGGCTACGCCCCTGAATC--CTCCAGACTGAAGGTGAGGTCTTT 380
.|..|..|| |||||| .|| ||.|.||||||.|..|..|
BL03824___yqb 333 ---TCTTGATTA------TGAATCTGTTC--GATTCAAGGTGCGCCCGCT 371
BSNT_02135 381 ATGA 384
||||
BL03824___yqb 372 ATGA 375
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