Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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DNA alignment: BSNT_02140 and BL03822

See Amino acid alignment / Visit BSNT_02140 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:23:37
# Commandline: needle
#    -asequence dna-align/BSNT_02140___xkdJ.1.5803.seq
#    -bsequence dna-align/BL03822___xkdJ.2.5803.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile dna-align/BSNT_02140___xkdJ-BL03822___xkdJ.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_02140___xkdJ-BL03822___xkdJ.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_02140___xkdJ
# 2: BL03822___xkdJ
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 466
# Identity:     297/466 (63.7%)
# Similarity:   297/466 (63.7%)
# Gaps:          50/466 (10.7%)
# Score: 813.0
# 
#
#=======================================

BSNT_02140___      1 ATGAACAGTGAAACAGGATCGATCATGGCGTTTTTGTA-CA------GCC     43
                     .|||||...|||||.|||||..|||||...||.||.|| ||      .||
BL03822___xkd      1 TTGAACGACGAAACGGGATCTGTCATGAATTTCTTTTATCAAGTCTTTCC     50

BSNT_02140___     44 GGTGGTCTGTTCCTATTTATGAACGCGAGCTTCCTGATCACTTTCAGGTG     93
                     .||.|||||       |||||||...||..|.||.||.||||||||..|.
BL03822___xkd     51 TGTCGTCTG-------TTATGAAAAGGAAATACCCGACCACTTTCAAATA     93

BSNT_02140___     94 CCGTCGTTATACGTCCCGCCACCATCTGTTTTCGAGGAAACAGATACGGT    143
                     ||||||.|.||..|.||.||.||.||||||||.||.||.|..||||||||
BL03822___xkd     94 CCGTCGCTGTATTTTCCTCCCCCTTCTGTTTTTGATGAGAATGATACGGT    143

BSNT_02140___    144 CTCCACATTAAAAAAAACCTACAGTCTCAATGTAAAACTGTTTCATCTGG    193
                     .||.|||||.||||||..||.||..||.|||||.|||||||||||.|..|
BL03822___xkd    144 TTCAACATTTAAAAAAGTCTTCACCCTGAATGTGAAACTGTTTCACCACG    193

BSNT_02140___    194 ACTCCGTTCAGGCGCTGGATGAAGCGGACAGGCTCGCGGATGCCATCAGA    243
                     |.||....|||||.|..|||.|.||.||..|..|.||.||.|||.|.||.
BL03822___xkd    194 ATTCGCAGCAGGCCCATGATCATGCCGAGCGCATTGCAGACGCCGTAAGG    243

BSNT_02140___    244 GAAGCGAGAAATATGATTCCGCTGCTGAGTGA---ATCCGGTGAGAAA--    288
                     ||||||||..|.||.||.||   |||.|.|||   |||.|||   |||  
BL03822___xkd    244 GAAGCGAGGCACATCATACC---GCTCATTGACCGATCGGGT---AAAGG    287

BSNT_02140___    289 -ACGGGGGATATGGTT-CGCATCTCCCAAATCGAGACAAGGGTAGGAGAC    336
                      ||.|||||.| |.|| .|.|||..||..||||||||.||..||||.||.
BL03822___xkd    288 CACAGGGGACA-GCTTGAGGATCAGCCGGATCGAGACGAGAATAGGGGAT    336

BSNT_02140___    337 AGGGGCGAGGCGGCCATGGTGA-TCAGGTGGAGCAGCCGATATTATTATC    385
                     ...|||...|||.||||..|.| ||| .||||.||||||.||.|..||  
BL03822___xkd    337 TCCGGCACCGCGTCCATTATTATTCA-ATGGAACAGCCGCTACTGGTA--    383

BSNT_02140___    386 ACAAAACAGAACAGC---CTGTCTTACAGGATATCGACA--TGA----AC    426
                       .||||.|.|.|||   ||.|||  |.|||    .|||  |||    ||
BL03822___xkd    384 --CAAACGGGAAAGCGAACTTTCT--CTGGA----AACAATTGATTTTAC    425

BSNT_02140___    427 -AGCGGGGTGAAATAA    441
                      |.|||||||||||||
BL03822___xkd    426 AAACGGGGTGAAATAA    441


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