Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_02144 and BL03821
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:23:37
# Commandline: needle
# -asequence dna-align/BSNT_02144___xkdK.1.5803.seq
# -bsequence dna-align/BL03821___xkdK.2.5803.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_02144___xkdK-BL03821___xkdK.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_02144___xkdK-BL03821___xkdK.aln
########################################
#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_02144___xkdK
# 2: BL03821___xkdK
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 1435
# Identity: 1007/1435 (70.2%)
# Similarity: 1007/1435 (70.2%)
# Gaps: 122/1435 ( 8.5%)
# Score: 3427.0
#
#
#=======================================
BSNT_02144___ 1 ATGAATGGCGGAACATTTACAACAGGCAAAGAAAAAGAACGTGCAGGCAT 50
|||||.|||||||||||||||.||||||||||||||||.|||||.|||||
BL03821___xkd 1 ATGAACGGCGGAACATTTACACCAGGCAAAGAAAAAGATCGTGCCGGCAT 50
BSNT_02144___ 51 TTATTTTAACTTTAAAACGACGGCACAGGAGCGGGTATCACTCAGTGAAC 100
|||||||||.|||||||||||.|||.||||.||.||.||..||.|.||.|
BL03821___xkd 51 TTATTTTAATTTTAAAACGACAGCAGAGGAACGCGTTTCCATCGGGGATC 100
BSNT_02144___ 101 GGGGAACAGTCGCACTTCCGGTCGCATCA--AGCTGGGGCGAAGCGAAAA 148
|.||.|||||.||.||.||.|||| ||| ||||||||.||..||||||
BL03821___xkd 101 GCGGTACAGTTGCCCTCCCTGTCG--TCATGAGCTGGGGGGAGCCGAAAA 148
BSNT_02144___ 149 CGTTCGTCTCCATTTCCAGTGTTGAAGACCTAAACAAAAAAGTGGGCCTC 198
|.|||||.||.||||||||..||||||||.||||.||||||||.||..|.
BL03821___xkd 149 CATTCGTATCGATTTCCAGCATTGAAGACTTAAATAAAAAAGTAGGGTTG 198
BSNT_02144___ 199 AGCATTGATGACCCGTCTTTATTGCTGCTGCGTGAAGCGAAGAAAAATGC 248
|.|||.|||||.||||||.|..||||..|.||.||||||||||||||.||
BL03821___xkd 199 AACATCGATGATCCGTCTCTTCTGCTTTTCCGGGAAGCGAAGAAAAACGC 248
BSNT_02144___ 249 GAAAACGGTATTGATGTACCGTCTAACCGAAGGTGTCCGAGCGTCTGCTG 298
..|.||.||.|||.||||||||||.|.|..|| |||||.|.|| |
BL03821___xkd 249 ACAGACCGTTTTGCTGTACCGTCTGAACACAG------GAGCGCCGGC-G 291
BSNT_02144___ 299 ATATTGCTGAA---GGCGTCAAA--------GCAACTGCAGTATATGGCG 337
|.| ||..|| |||| ||| |.|||.|||..|||.||.|
BL03821___xkd 292 AAA--GCCCAAATCGGCG--AAACGCTGAGCGTAACGGCAAAATACGGAG 337
BSNT_02144___ 338 GAACAAAAGGTAATGACATTATC-ATCCGCATCAATC--AAAATGTACTG 384
|....|||||.||.|||||| || |||||||| .|| |||||||.||.
BL03821___xkd 338 GCGAGAAAGGGAACGACATT-TCGATCCGCAT--TTCCGAAAATGTGCTC 384
BSNT_02144___ 385 GATGCTAATTCTTTCGATGTGACAACATATAT-GGACGAGTCA-GAGGTT 432
|||.||||....||.|||||.||.||.|.|.| |||..|| | ||.|.|
BL03821___xkd 385 GATTCTAAAAAGTTTGATGTCACCACCTTTGTCGGAACAG--ATGAAGCT 432
BSNT_02144___ 433 GATAAACAGACTGTCAAAAAGGCTGAAGAATTAACAGCTAACGGCTATGT 482
||...|||.||.|||||||.|||.|||||..|.||.||.||.|..||.||
BL03821___xkd 433 GACCGACAAACCGTCAAAACGGCAGAAGAGCTTACCGCAAATGCGTACGT 482
BSNT_02144___ 483 CACTTTT--ACCGGAACAGGCGATCTTTCTTCAACGATTCCTCTCACTGG 530
|.|.||| |..||| |||||..|||
BL03821___xkd 483 CGCGTTTCAAGGGGA--AGGCGCGCTT----------------------- 507
BSNT_02144___ 531 ATCAGAAGGAGACACTG-CAGCTGAGAC---GCTGAATGCATCCGCGG-G 575
|| |||| ||||.|..|| |||| .||..||.|| |
BL03821___xkd 508 ----------GA-ACTGACAGCGGGCACAAAGCTG---TCAGGCGGGGAG 543
BSNT_02144___ 576 AATCCGTTTATCTGGCGGTACGGATAAAGCCCCTGTCAACT-CCGATTAT 624
|| |||.|||| .|||| || | |||||||.
BL03821___xkd 544 AA-------------CGGAACGG--CAAGC----GT----TGCCGATTAC 570
BSNT_02144___ 625 ACAG-ATTTCTTAGCCGCGGCTGAAACGGAGAGCTTTGATGTGATTGCGC 673
||.| |||| ||||..||.||.||||||||...|||..||..|||.||.|
BL03821___xkd 571 ACCGCATTT-TTAGATGCTGCCGAAACGGAATACTTCAATACGATCGCAC 619
BSNT_02144___ 674 TGCCTGTTGCAGAAGGTGACCAGTTGAAGGCGACGTTTGCTGCTTTCATT 723
|.||.||.|||||...|||.|||.||||.||.||.|||||.||||||||.
BL03821___xkd 620 TCCCGGTCGCAGACAATGAACAGCTGAAAGCCACTTTTGCCGCTTTCATC 669
BSNT_02144___ 724 AAACGCCTTCGCGACGGCCAAGGACAAAAAGTGCAAGGCGTCACAGCCAA 773
|||||||||||||||...||.||.||.|||||.||||||||....|||.|
BL03821___xkd 670 AAACGCCTTCGCGACAAGCAGGGCCAGAAAGTCCAAGGCGTTGTCGCCGA 719
BSNT_02144___ 774 TTATGCCGGTGATTATGAAGGCATCATCAACGTAACTGAGGGTGTGCTGC 823
|||||||||.||.|||||||||||.||.||.|||||.|..||.||..|||
BL03821___xkd 720 TTATGCCGGAGACTATGAAGGCATTATTAATGTAACGGGAGGCGTCGTGC 769
BSNT_02144___ 824 TTGAAGATGGCACGGAAGTTACACCCGACAAAGCAACAGCTTGGGTAGCT 873
|.|||||.|||||.|||.|.||.||.||.|||||.||.||.|||||.||.
BL03821___xkd 770 TGGAAGACGGCACTGAAATCACTCCTGAAAAAGCGACGGCATGGGTTGCC 819
BSNT_02144___ 874 GGAGCGAGTGCAGGAGCAACCTTTAACCAATCACTTACATTTGTAGAGTA 923
||||||||.|||||.||.||.||||||||.||.||.||||||||.||.||
BL03821___xkd 820 GGAGCGAGCGCAGGCGCGACTTTTAACCAGTCGCTGACATTTGTCGAATA 869
BSNT_02144___ 924 CGGAGGCGCAGTTGATGTGTTACACCGCCTCGACCACGATACGATTGTTG 973
||.|||.||.||||||||..|..||||.||.||..|.||...|.|..|.|
BL03821___xkd 870 CGAAGGTGCTGTTGATGTCCTGAACCGTCTGGATGAAGACCAGGTCATCG 919
BSNT_02144___ 974 AACGTCTGGGCAAAGGTGAATTTTTATTCACATTCGACGCCCGTGATAAA 1023
||||||||...|||||.||.||||||||.|||||.||.||.||.|||.||
BL03821___xkd 920 AACGTCTGAAAAAAGGCGAGTTTTTATTTACATTTGATGCACGCGATCAA 969
BSNT_02144___ 1024 TCCGTCAGCGTAGAAAAGGACATTAACTC----ACTCGTGACGTTCACAG 1069
||.||||||||.|||||.|||||.||||| || ||..|||||.|
BL03821___xkd 970 TCGGTCAGCGTTGAAAAAGACATCAACTCTTTAAC----GAGTTTCACTG 1015
BSNT_02144___ 1070 CTGAGAAAAACAAGAAATTTGCGAAGAACAAAATCGTTCGTGTCCTGGAT 1119
|.||.||.|||||.|||||..||||.|||||||||.|.||.||.||.||.
BL03821___xkd 1016 CCGACAAGAACAAAAAATTCTCGAAAAACAAAATCATCCGCGTTCTCGAC 1065
BSNT_02144___ 1120 GCTGTGAATAATGATTTAACACGCGAGCTGAAAGCCTTAATTAAATCAAG 1169
|..||.||.|||||..|.||.||||||.|.||.||.|||||.|||.||.|
BL03821___xkd 1066 GGAGTCAACAATGACCTGACCCGCGAGTTAAAGGCTTTAATCAAAGCACG 1115
BSNT_02144___ 1170 AAAAGGCAGCGGAAGCGATATCCCGGCATCTGAAGACGGACTGCAGTATG 1219
|||||..|||||.|||||.|||||.|||||.||.||.||..||||.||.|
BL03821___xkd 1116 AAAAGCAAGCGGCAGCGACATCCCTGCATCAGACGATGGTTTGCAATACG 1165
BSNT_02144___ 1220 TAAAAACGATGATCACGCAATACATGACAACACTTCAGGATGCAGGCGGC 1269
|.||||||.||||||..||.||.|||||..|.||||||||.||.||||||
BL03821___xkd 1166 TCAAAACGCTGATCATTCAGTATATGACGGCGCTTCAGGAAGCCGGCGGC 1215
BSNT_02144___ 1270 ATCACTGGCTTTGATTCCGATGAA---GATATCACAATTTCAATGAATGA 1316
||.||.||||||||||| |||| |||||..|.|||.||.|||||||
BL03821___xkd 1216 ATTACCGGCTTTGATTC---TGAAAGCGATATTGCCATTACACTGAATGA 1262
BSNT_02144___ 1317 AGATCGTGACGGCTTCTTGATTGACCTGGCTGTACAGCCTGTCGACGCAG 1366
|||.||.|||||.||.||.||.||..|.||.||.|||||.||.||.||||
BL03821___xkd 1263 AGACCGCGACGGGTTTTTAATCGATTTAGCCGTTCAGCCGGTTGATGCAG 1312
BSNT_02144___ 1367 CAGAAAAATTCTACTTTAATGTGGAGGTAAACTAA 1401
|||||||||||||||||||||||||||||||.||.
BL03821___xkd 1313 CAGAAAAATTCTACTTTAATGTGGAGGTAAAATAG 1347
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