Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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DNA alignment: BSNT_02146 and BL03819

See Amino acid alignment / Visit BSNT_02146 in genome browser / Return to Orthologue table
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# Program: needle
# Rundate: Mon  8 Mar 2010 06:23:37
# Commandline: needle
#    -asequence dna-align/BSNT_02146___xkdM.1.5803.seq
#    -bsequence dna-align/BL03819___xkdM.2.5803.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile dna-align/BSNT_02146___xkdM-BL03819___xkdM.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_02146___xkdM-BL03819___xkdM.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_02146___xkdM
# 2: BL03819___xkdM
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 444
# Identity:     357/444 (80.4%)
# Similarity:   357/444 (80.4%)
# Gaps:           0/444 ( 0.0%)
# Score: 1437.0
# 
#
#=======================================

BSNT_02146___      1 ATGGCATTAAAAGCACAAAACACAATTTCAGGAAAAGAAGGCCGTTTATT     50
                     ||||||||||||||.||||||||.|||||.|||||||||||||||.|.||
BL03819___xkd      1 ATGGCATTAAAAGCGCAAAACACGATTTCCGGAAAAGAAGGCCGTCTTTT     50

BSNT_02146___     51 CCTCGATGGCGAGGAAATGGCGCACATCAAAACATTTGAAGCAAACGTTG    100
                     .|||||.||..|.||.|||||.|||||||||||||||||.||.||.||.|
BL03819___xkd     51 TCTCGACGGACAAGAGATGGCTCACATCAAAACATTTGAGGCCAATGTCG    100

BSNT_02146___    101 AGAAAAACAAATCTGAAGTCAACATTATGGGCCGCCGCATGACAGGCCAT    150
                     |.||.||.|||.||||||||||.||||||||||||||||||||.|||||.
BL03819___xkd    101 AAAAGAATAAAGCTGAAGTCAATATTATGGGCCGCCGCATGACCGGCCAC    150

BSNT_02146___    151 AAAACAACAGGGGCAAATGGAACAGGGACCGCAACGTTCTACAAAGTCAC    200
                     ||.||||||||||||||.||.||.||.||.||.||.||.||.||||||||
BL03819___xkd    151 AAGACAACAGGGGCAAACGGCACGGGAACGGCGACATTTTATAAAGTCAC    200

BSNT_02146___    201 ATCAAAATTCGTGCTATTGATGATGGACTATGTCAAAAAAGGCAGCGACC    250
                     .||..||||.||....||.||||||.|||||||.|||||||||...||.|
BL03819___xkd    201 GTCTCAATTTGTCACGTTAATGATGAACTATGTGAAAAAAGGCGATGATC    250

BSNT_02146___    251 CTTATTTCACGCTCCAAGCCGTGCTGGATGATCAATCCTCCGGCCGGGGC    300
                     |.||||||||||||||.|||||.||.||.||.||.||.||.|||||.||.
BL03819___xkd    251 CGTATTTCACGCTCCAGGCCGTCCTTGACGACCAGTCATCAGGCCGCGGA    300

BSNT_02146___    301 ACAGAGCGAGTCACGCTGTACGACGTCAACTTTGACTCTGCCAAAATCGC    350
                     ||.|||||.|||||||||||.|||||.||.||||||||.|||||||||||
BL03819___xkd    301 ACGGAGCGGGTCACGCTGTATGACGTGAATTTTGACTCGGCCAAAATCGC    350

BSNT_02146___    351 AAGCCTTGATGTCAATTCAGAAGCGTTAGAGGAAGAAGTTCCATTTACAT    400
                     ..|.|||||.|||.|.|||||.|||.|.||.||||||||.||.||.||||
BL03819___xkd    351 CGGTCTTGACGTCGACTCAGAGGCGCTCGAAGAAGAAGTGCCGTTCACAT    400

BSNT_02146___    401 TCGAAGACTTCGACGTCCCTGAAAAGCTATCTGACACGTTTTAA    444
                     |.|||||.||||||||.||||||||.||....||.|||||||||
BL03819___xkd    401 TTGAAGATTTCGACGTTCCTGAAAAACTGAAAGATACGTTTTAA    444


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