Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_02151 and BL03816
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:23:39
# Commandline: needle
# -asequence dna-align/BSNT_02151___xkdP.1.5803.seq
# -bsequence dna-align/BL03816___xkdP.2.5803.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_02151___xkdP-BL03816___xkdP.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_02151___xkdP-BL03816___xkdP.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_02151___xkdP
# 2: BL03816___xkdP
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 680
# Identity: 491/680 (72.2%)
# Similarity: 491/680 (72.2%)
# Gaps: 43/680 ( 6.3%)
# Score: 1689.5
#
#
#=======================================
BSNT_02151___ 1 TTGACTAAGTCTATCTATGAATTTTGGATATCACAGGGGAAAGAAAAGCT 50
.|||||||.||..|.||.|||||||||.|..|.||.||.||.||||||||
BL03816___xkd 1 ATGACTAAATCCGTGTACGAATTTTGGCTGACGCAAGGAAAGGAAAAGCT 50
BSNT_02151___ 51 GCGATTCCCTGTTCTTCCTGA--AGCGATTGATAT-AGCGAATAGTGTAC 97
|||..|||||||.|||||.|| ||| ||||..| ||| ||||.|.|..
BL03816___xkd 51 GCGCCTCCCTGTGCTTCCAGAGCAGC--TTGACGTCAGC-AATAATCTTG 97
BSNT_02151___ 98 AAAATGACTCAGTAAAGAT---AACGGGATTGGGTGAACTAACGTTTATT 144
..||.||.||.||||||.| ||.| ||.||.||..|.||||||||.
BL03816___xkd 98 CGAACGAATCTGTAAAGGTGTCAAAG---TTCGGCGAGGTGACGTTTATC 144
BSNT_02151___ 145 GAAGAACCCGGAGCAAAAGA-AATTTCATTTTCTTCTTTTTTTCCAAAAA 193
.|.|||||.||||| .|||| .|||||||||||.|||..||||||.||||
BL03816___xkd 145 AATGAACCGGGAGC-GAAGACGATTTCATTTTCGTCTCATTTTCCGAAAA 193
BSNT_02151___ 194 AGTATACGCCGATAGCTGAATATCAAA----ATCTCCCGTCTCCGGAAAA 239
|||||.|.|||.|..|.||||| |||| .||| .||.|||||.||
BL03816___xkd 194 AGTATTCTCCGCTCTCGGAATA-CAAAGGGTTTCT---TTCGCCGGAGAA 239
BSNT_02151___ 240 TGCCATTGCGAAAATTGAAAAATGGATGAAGGTAAAAAAGCCTGTTCAAT 289
.||.|||...|||||.||.|||||||||||.|.||||||.||.|||||||
BL03816___xkd 240 CGCGATTCTTAAAATCGAGAAATGGATGAAAGCAAAAAAACCGGTTCAAT 289
BSNT_02151___ 290 TTTTAATTACGGGAACAAAAATTAATATGACATGCAGTATTGAAAGCCTT 339
||.|..|.||||||||.||.||.|||.|.||||||||.|||||||.|.||
BL03816___xkd 290 TTCTCGTGACGGGAACGAAGATCAATTTCACATGCAGCATTGAAAACTTT 339
BSNT_02151___ 340 AAATATAGTGAGGGAGACAATGAAATAGGAGATCGGGATTTTGAT----- 384
....||.|.|||||.||.||.||.||.||.||.||||||||||||
BL03816___xkd 340 TCGCATCGCGAGGGTGAAAAGGATATCGGCGACCGGGATTTTGATCTCAC 389
BSNT_02151___ 385 ATTGTGCTAAAAGAATACAAAACCGCTTCCCCGCGGAAAATCAAGCAAAA 434
|||| |||||.|||.||||.||.||.||.|||||.||.||.|||||
BL03816___xkd 390 ATTG-----AAAGAGTACCAAACAGCATCACCCCGGAAGATTAAACAAAA 434
BSNT_02151___ 435 GAAAAAAACAAAGGCAAAACGTCCGTCGAA---GGCTGCGCCGAAGACGT 481
.||.|||||.|||..||||||.|||||.|| |||| ||.||.|.||
BL03816___xkd 435 AAAGAAAACGAAGAAAAAACGGCCGTCCAAACTGGCT---CCAAAAATGT 481
BSNT_02151___ 482 ACACAGTGAAAAAGGGAGACACGCTATGGGACATTGCAGGCAGATTTTAC 531
||||.||.|||||.||.||.|||||.|||.||||.||||||.|.||||||
BL03816___xkd 482 ACACCGTCAAAAAAGGCGATACGCTCTGGCACATCGCAGGCCGTTTTTAC 531
BSNT_02151___ 532 GGGAACAGCACTCAATGGCGCAAAATTTGGAACGCCAATAAAACA-TCAA 580
||.||||||....|||||||.|||||||||||.||.|| .||.|| .|.|
BL03816___xkd 532 GGAAACAGCCAGGAATGGCGGAAAATTTGGAATGCGAA-CAAGCAGGCGA 580
BSNT_02151___ 581 TGATCAAACGAAGCAAACGGAACATCAGGCAGCCGGGTCACTGGATTTTT 630
||||||||||||||||.||.|||||||..||||||||.||.|||||||||
BL03816___xkd 581 TGATCAAACGAAGCAAGCGAAACATCAAACAGCCGGGACATTGGATTTTT 630
BSNT_02151___ 631 CCCGGCCAAAAATTAAAGATACCGCAATGA 660
||.||.|||||..|.||.|||||..||
BL03816___xkd 631 CCGGGGCAAAAGCTGAAAATACCATAA--- 657
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