Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_02152 and BL03815
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:23:39
# Commandline: needle
# -asequence dna-align/BSNT_02152___xkdQ.1.5803.seq
# -bsequence dna-align/BL03815___xkdQ.2.5803.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_02152___xkdQ-BL03815___xkdQ.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_02152___xkdQ-BL03815___xkdQ.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_02152___xkdQ
# 2: BL03815___xkdQ
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 1001
# Identity: 716/1001 (71.5%)
# Similarity: 716/1001 (71.5%)
# Gaps: 43/1001 ( 4.3%)
# Score: 2391.0
#
#
#=======================================
BSNT_02152___ 1 ATGATAGAACTGTTCGTCATTAAAGACACAGAGTGGCTTGAGCTGGTTGC 50
|||||.|||.|.||.|||||.|||||.|..||.|||..|||.||.||..|
BL03815___xkd 1 ATGATCGAATTATTTGTCATAAAAGAAAGCGAATGGTATGAACTTGTCAC 50
BSNT_02152___ 51 TGAAAGCGTATCGCTTGAGGGCCATCGTTATCAGGCGCCGCGCTCCATTG 100
.||||||||..|..|.||.||..|..|.||.||||||||.||.||.||.|
BL03815___xkd 51 CGAAAGCGTCACATTGGAAGGAGAAAGGTACCAGGCGCCTCGTTCGATCG 100
BSNT_02152___ 101 AAGCGACCATCGTCACCAAACAGGGCGACCAGACGTATTACAGTGTCTCA 150
|||||.|.||.||.|.|||.|||||...|||.|..||||||||.|| .||
BL03815___xkd 101 AAGCGTCGATTGTGATCAAGCAGGGAAGCCACAAATATTACAGCGT-GCA 149
BSNT_02152___ 151 -GAAGGAGATACGGTCTTGTTTAAATGGAAGGGAAAAGAGCTGTTTCGGG 199
|||||.|||||.||.||.|||||||||||.||||||||.||||||||.|
BL03815___xkd 150 GGAAGGCGATACCGTTTTATTTAAATGGAAAGGAAAAGAACTGTTTCGCG 199
BSNT_02152___ 200 GCATTGTTTTTGCA--AGAACCCCGGACGAGCATACGCTTGCCTTCAGCG 247
|.|||||.|| || ||....|||.|.||..||||||||.|.||.|..|
BL03815___xkd 200 GAATTGTGTT--CAGCAGGGTGCCGAAAGAATATACGCTTACGTTTAAAG 247
BSNT_02152___ 248 CTTATGACATGCTTCAGTACCTGGTCAAAAACCAGGATATGTACGTGTTT 297
|.||.|||||||||||||||.||||.||||||||||||.|.||.||.||.
BL03815___xkd 248 CGTACGACATGCTTCAGTACTTGGTGAAAAACCAGGATGTCTATGTATTC 297
BSNT_02152___ 298 TC---CAATCAGCGG--GCTGACCAGATCATCAGAAGGATTGCTAGTGAC 342
|| ||| |.||| |||||| ||..|||.|.|.|||||.|..|||
BL03815___xkd 298 TCGAACAA--AACGGCCGCTGAC---ATTGTCAAACGAATTGCGAACGAC 342
BSNT_02152___ 343 TTCCAGATACCGACAACCTCGATCGCAAACACAGGCCATACGATCAAAAG 392
||.||.||.||.|.|...|||||.||||||||.||.||||||||.|||..
BL03815___xkd 343 TTTCAAATTCCCAAAGGTTCGATTGCAAACACCGGACATACGATTAAATC 392
BSNT_02152___ 393 TCTTGTCATTAAAAATGATACGACATTGTATGACATCATATTAAAAGCGC 442
.||.|||.|||||.|..||||||...||||||||||.||.||||||||||
BL03815___xkd 393 GCTCGTCTTTAAAGACAATACGAGCCTGTATGACATTATTTTAAAAGCGC 442
BSNT_02152___ 443 TGAAACAGACGAAAAGCCAGACAGGACGACATTACCAGCTGTATTCGGAA 492
||....||||.||||..||.||.|||..|.|.||.|||||||||.|.|||
BL03815___xkd 443 TGCGGGAGACAAAAAAGCAAACCGGAAAAAACTATCAGCTGTATGCCGAA 492
BSNT_02152___ 493 AAAGGAAAGCTCGGTCTGCGCGCTTGGCCAGATCCGTCAGAGG---TATG 539
|||||||||||..||.|.||.||.|||||.||.||| |||| |.||
BL03815___xkd 493 AAAGGAAAGCTGTGTTTACGAGCGTGGCCCGAACCG---GAGGATATCTG 539
BSNT_02152___ 540 GGTGCTTGAAACGGGCGTCAATATCACGGGCTACCAATACAGCACTTCTA 589
|||..|.||||||||.||.||.||.||||..|||...||||||||.||.|
BL03815___xkd 540 GGTTTTGGAAACGGGTGTGAACATTACGGATTACGCTTACAGCACGTCAA 589
BSNT_02152___ 590 TAAACGACACTGCTACTCGGGTGGTGCTTCGCCGGCAGAAGGACAATAAG 639
|..|.||.||.||.||.||||||...||..|...||||||.||.||.||.
BL03815___xkd 590 TCGATGAAACGGCAACCCGGGTGAAACTGAGAAAGCAGAAAGATAACAAA 639
BSNT_02152___ 640 ACATATAAAGCCTCTGCCAAG----GACAGTTCAGGCTTAAATAAATACG 685
||.||||..||.||.| |||| || || |.||..|.||.|.||.||
BL03815___xkd 640 ACCTATACCGCATCCG-CAAGCGATGA-AG--CCGGTATGAAAAGATTCG 685
BSNT_02152___ 686 GTGTGCTTCAATATACGGAAACGGTCACAGATGACATCAACCAGGCACAG 735
|.||.||.||.||.||.||||||||..|.|||||.||.|||.||||.|||
BL03815___xkd 686 GCGTTCTCCAGTACACAGAAACGGTTTCGGATGATATTAACGAGGCGCAG 735
BSNT_02152___ 736 CTTCAGC-AGCGGGC--AGATG-TAC-GTCTTGCTGAAAAAAAGGGCGTG 780
| ||.|| |.||||| |||.| ||| | ||||||||.||.|||||.
BL03815___xkd 736 C-TCCGCGACCGGGCGAAGAAGATACAG----GCTGAAAAGAAAGGCGTC 780
BSNT_02152___ 781 AAAAAAGAACTGAAAAATATTCAGGCAGTGGGCATCCCGGAAGTGCAGAG 830
||||||||.|||||||..||.||||||.|.|||||.||||||||.||.||
BL03815___xkd 781 AAAAAAGAGCTGAAAAGCATACAGGCAATCGGCATACCGGAAGTTCAAAG 830
BSNT_02152___ 831 CGGCTTGCCTGTCTATATTTCGATTCCGGAGGCCGGCATCAAGAAAACCT 880
|||..||||.||.|||||.|||||||||||.||.|||||.||..||||||
BL03815___xkd 831 CGGACTGCCGGTTTATATATCGATTCCGGAAGCGGGCATTAAAGAAACCT 880
BSNT_02152___ 881 ATTGGGTAGATACGGACCGGCATGAATTTAAAGGAACGAAACATACGATG 930
|||||||.||||.|||....||.||.||||.||||||.||||||..||||
BL03815___xkd 881 ATTGGGTTGATAAGGATAAACACGATTTTACAGGAACAAAACATGTGATG 930
BSNT_02152___ 931 ACGATCGATGTTGTCGAAAAGAATACGATGCCGGAAGGAG---TTTCCTG 977
|||||.|||||.||||..||.||.||.||.||.||||||| .|||.||
BL03815___xkd 931 ACGATTGATGTCGTCGCTAAAAACACCATACCTGAAGGAGCGTCTTCATG 980
BSNT_02152___ 978 A 978
|
BL03815___xkd 981 A 981
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