Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_02154 and BL03813
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:23:39
# Commandline: needle
# -asequence dna-align/BSNT_02154___xkdS.1.5803.seq
# -bsequence dna-align/BL03813___xkdS.2.5803.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_02154___xkdS-BL03813___xkdS.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_02154___xkdS-BL03813___xkdS.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_02154___xkdS
# 2: BL03813___xkdS
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 430
# Identity: 322/430 (74.9%)
# Similarity: 322/430 (74.9%)
# Gaps: 8/430 ( 1.9%)
# Score: 1168.0
#
#
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BSNT_02154___ 1 ATGGCCCTGACACCAGAAGTGGAGTTTGAAGATATTGAAGATGAGAGCGA 50
|||||.||..|.||.|||||....|||||||||||.||.|||||.|||||
BL03813___xkd 1 ATGGCTCTTTCGCCGGAAGTATCTTTTGAAGATATCGAGGATGACAGCGA 50
BSNT_02154___ 51 AGTCATTGAAACCTCGCAAACGTACAAAATAGATTTTGAAAACGGAAGAA 100
.||.|||||.||.||..|||||||||||||.||||||||||..||.||.|
BL03813___xkd 51 TGTGATTGAGACTTCAAAAACGTACAAAATTGATTTTGAAACAGGCAGGA 100
BSNT_02154___ 101 TTACGAATGAGCTGATTACCGGGCTTGAAGC----GATCAGGCAGTTCGT 146
|.|||..|||..|||||.|.|||||.||||| ||.||....||| |
BL03813___xkd 101 TGACGGGTGATATGATTTCGGGGCTGGAAGCCGTGGAACAAATGGTT--T 148
BSNT_02154___ 147 GTATATCGCCTTACAGACAGAACGCTATGCATATTCCATATACAGCCATA 196
||||..|| ||.|.| ||.||.|||||.|||||..||.|.||||||||||
BL03813___xkd 149 GTATGGCG-CTGAGA-ACCGAGCGCTACGCATACGCCGTTTACAGCCATA 196
BSNT_02154___ 197 ATGTCGGAAACGAGCTTCAGGACGTGCTGACAGATCATGAGACGACTGAT 246
||.|||||||.||.||.|||||.||.||..||||||||||.|||||.||.
BL03813___xkd 197 ATATCGGAAATGAACTGCAGGAGGTTCTTTCAGATCATGAAACGACCGAC 246
BSNT_02154___ 247 GCGTATAAAAAGATGGAGATTCCGAGACTGATAGAAGAGGCGCTGGTTTA 296
||.||||||.|.||||||||.||||||.||||.||.||.||.||..|.||
BL03813___xkd 247 GCTTATAAAGAAATGGAGATACCGAGATTGATCGAGGAAGCCCTCATATA 296
BSNT_02154___ 297 TGATGACCGGATATCGGCTGTAACAGATTTTGAGATTGAAAAACAAGGCG 346
.||||||||.||.|||||.||.||.||.||.||||||||....|||||||
BL03813___xkd 297 CGATGACCGAATTTCGGCGGTGACCGACTTCGAGATTGAGCGTCAAGGCG 346
BSNT_02154___ 347 ACGCGTTTCATGTGTCCTTCGTGGTGGAGACGGATGAAGGAACGCTTGAG 396
|.||.||.||.||||||||...|||.||.||.||||||||.||..|.||.
BL03813___xkd 347 ATGCCTTCCACGTGTCCTTTTCGGTTGAAACCGATGAAGGGACATTGGAA 396
BSNT_02154___ 397 ATTGAGGAGGTGATTGGCGAACATGTTTGA 426
||.||||||||||||||.|||.||||||||
BL03813___xkd 397 ATCGAGGAGGTGATTGGGGAAGATGTTTGA 426
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