Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_02166 and BL03807
See
Amino acid alignment /
Visit
BSNT_02166 in genome browser /
Return to
Orthologue table
########################################
# Program: needle
# Rundate: Mon 8 Mar 2010 06:23:39
# Commandline: needle
# -asequence dna-align/BSNT_02166___xhlB.1.5803.seq
# -bsequence dna-align/BL03807.2.5803.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_02166___xhlB-BL03807.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_02166___xhlB-BL03807.aln
########################################
#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_02166___xhlB
# 2: BL03807
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 281
# Identity: 189/281 (67.3%)
# Similarity: 189/281 (67.3%)
# Gaps: 34/281 (12.1%)
# Score: 525.0
#
#
#=======================================
BSNT_02166___ 1 ATGAACACGT-TTGACAAGGGCACGGTCATCAGGACGGTGCTTCTTTTAA 49
||||| ||.| |.|||||.|||||||||.|||||||||||||||||||.|
BL03807 1 ATGAA-ACATATCGACAAAGGCACGGTCGTCAGGACGGTGCTTCTTTTTA 49
BSNT_02166___ 50 TTGCTTTAATCAACCAGACCATGCTGATGCTCGGCAAATCACCATTGGAC 99
||||..|..||||.|||||..||.|.|||.|.|| |||.|....||.|.|
BL03807 50 TTGCGCTGGTCAATCAGACGTTGATCATGTTTGG-AAAGCCGGTTTTGCC 98
BSNT_02166___ 100 ATTCAG--GAGGAGCAG-GTCAATCAGCTCGCTGACGCCCTTTATTCAGC 146
..|| | ||.||.||| .|||..|| .|.||.||.|||||.|||||.||
BL03807 99 GGTC-GCTGAAGATCAGATTCATACA-TTGGCGGATGCCCTGTATTCGGC 146
BSNT_02166___ 147 CGGTTCCATTGCATTTACAAT---TGGAACGACAC-TTGCCGCTTGGTTT 192
|||.||....||.|||||.|| ||.|.|| |.| ||||| ||||.|
BL03807 147 CGGATCTGCGGCTTTTACGATCGCTGCATCG-CTCGTTGCC---TGGTAT 192
BSNT_02166___ 193 AAAAACAACTATATAACAGA-AAAAGGGAAA----AAACAGCGCGACTTG 237
||.|||||||||.|.|| || .||||||||| |||.| ||..|.
BL03807 193 AAGAACAACTATGTGAC-GAGCAAAGGGAAAATGCAAAAA----GAAGTT 237
BSNT_02166___ 238 TTA-AGGGACAATAA---TCTGACGAAATAA 264
||| || ||.|| |.|.|||||||||
BL03807 238 TTACAG----AAAAAAGGTTTAACGAAATAA 264
#---------------------------------------
#---------------------------------------
Copyright (C) Natto Genome Project, 2009-2010. All rights reserved.