Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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DNA alignment: BSNT_02166 and BL03807

See Amino acid alignment / Visit BSNT_02166 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:23:39
# Commandline: needle
#    -asequence dna-align/BSNT_02166___xhlB.1.5803.seq
#    -bsequence dna-align/BL03807.2.5803.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile dna-align/BSNT_02166___xhlB-BL03807.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_02166___xhlB-BL03807.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_02166___xhlB
# 2: BL03807
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 281
# Identity:     189/281 (67.3%)
# Similarity:   189/281 (67.3%)
# Gaps:          34/281 (12.1%)
# Score: 525.0
# 
#
#=======================================

BSNT_02166___      1 ATGAACACGT-TTGACAAGGGCACGGTCATCAGGACGGTGCTTCTTTTAA     49
                     ||||| ||.| |.|||||.|||||||||.|||||||||||||||||||.|
BL03807            1 ATGAA-ACATATCGACAAAGGCACGGTCGTCAGGACGGTGCTTCTTTTTA     49

BSNT_02166___     50 TTGCTTTAATCAACCAGACCATGCTGATGCTCGGCAAATCACCATTGGAC     99
                     ||||..|..||||.|||||..||.|.|||.|.|| |||.|....||.|.|
BL03807           50 TTGCGCTGGTCAATCAGACGTTGATCATGTTTGG-AAAGCCGGTTTTGCC     98

BSNT_02166___    100 ATTCAG--GAGGAGCAG-GTCAATCAGCTCGCTGACGCCCTTTATTCAGC    146
                     ..|| |  ||.||.||| .|||..|| .|.||.||.|||||.|||||.||
BL03807           99 GGTC-GCTGAAGATCAGATTCATACA-TTGGCGGATGCCCTGTATTCGGC    146

BSNT_02166___    147 CGGTTCCATTGCATTTACAAT---TGGAACGACAC-TTGCCGCTTGGTTT    192
                     |||.||....||.|||||.||   ||.|.|| |.| |||||   ||||.|
BL03807          147 CGGATCTGCGGCTTTTACGATCGCTGCATCG-CTCGTTGCC---TGGTAT    192

BSNT_02166___    193 AAAAACAACTATATAACAGA-AAAAGGGAAA----AAACAGCGCGACTTG    237
                     ||.|||||||||.|.|| || .|||||||||    |||.|    ||..|.
BL03807          193 AAGAACAACTATGTGAC-GAGCAAAGGGAAAATGCAAAAA----GAAGTT    237

BSNT_02166___    238 TTA-AGGGACAATAA---TCTGACGAAATAA    264
                     ||| ||    ||.||   |.|.|||||||||
BL03807          238 TTACAG----AAAAAAGGTTTAACGAAATAA    264


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