Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_02096 and BL03799
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:23:35
# Commandline: needle
# -asequence dna-align/BSNT_02096___exuT.1.5803.seq
# -bsequence dna-align/BL03799___exuT.2.5803.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_02096___exuT-BL03799___exuT.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_02096___exuT-BL03799___exuT.aln
########################################
#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_02096___exuT
# 2: BL03799___exuT
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 1373
# Identity: 872/1373 (63.5%)
# Similarity: 872/1373 (63.5%)
# Gaps: 205/1373 (14.9%)
# Score: 2542.0
#
#
#=======================================
BSNT_02096___ 1 ATGTTTTCAAAAG--------------ATAAGCTTCCCGTTATCCTTTTT 36
|||||||||||.| || |||.||.||||||
BL03799___exu 1 ATGTTTTCAAACGGCCGCGGGTTTGTCAT--------CGTGATGCTTTTT 42
BSNT_02096___ 37 TTGTTCCTGGCAGGGGTGATTAATTACCTGGATCGCTCGGCGCTTTCCAT 86
| ||||.||.|||||||||||..|||||||.|||||..|.||..|
BL03799___exu 43 T------TGGCGGGAGTGATTAATTATTTGGATCGTTCGGCATTGTCTGT 86
BSNT_02096___ 87 TGCAGCTCCTTTTATTCAGGATGATCT-CACAT-TGTCTGCCACGCAAAT 134
.||.|||||||||||||||||.|||.| .|||| .||| |..||||.||
BL03799___exu 87 CGCCGCTCCTTTTATTCAGGAAGATTTGAACATACGTC--CGGCGCAGAT 134
BSNT_02096___ 135 GGGCTTGATTTTCAGCAGTTTTTCGATAGGTTATGCCATTTTTAACTTTC 184
||||.||.|.|||||||||||||..||.||.||||||.|.|||||.|||.
BL03799___exu 135 GGGCATGCTGTTCAGCAGTTTTTTCATCGGATATGCCGTCTTTAATTTTA 184
BSNT_02096___ 185 TTGGGGGCGTGGCATCCGACCGCTATGGGGCAAAGCTGAC-CTTATTTGT 233
|.||.|||..||||||.|||...||.||.||.||.|..|| | |||
BL03799___exu 185 TCGGCGGCTGGGCATCAGACAAATACGGAGCGAAACATACGC-----TGT 229
BSNT_02096___ 234 C----GCGATGGTTGTTTGGTCGCTGTTTAGCGGAGCAGTCGCCCTCGC- 278
| ||.|||||.||.||||||.|.||.|||||.||..|.||.||..|
BL03799___exu 230 CGGCTGCAATGGTCGTATGGTCGGTTTTCAGCGGCGCTATTGCACTGACA 279
BSNT_02096___ 279 -----TTTTGGCTTTGTCAGTCTGCTGATTATACGCATTCTCTTCGGAAT 323
|||.| |.||| |||.|.||.||.|||.|..|.|||||.||
BL03799___exu 280 TATAATTTCG----TTTCA--CTGTTTATCATCCGCGTCATTTTCGGCAT 323
BSNT_02096___ 324 GGGAGAAGGCCCGCTTTCGGCGACCATCAACAAGATGGTGAACAACTGGT 373
|||.|||||.|||||.||.|||.|.|..|.||||..|||.|||||.||||
BL03799___exu 324 GGGGGAAGGTCCGCTGTCAGCGGCAACGAGCAAGTCGGTCAACAATTGGT 373
BSNT_02096___ 374 TCCCGCCGACCCAGCGGGC--GTCCGTTATCGGTGTAACCAACAGCGGCA 421
|.||||..|...|..|||| |..|| .||||..|.||.|...||||.|
BL03799___exu 374 TTCCGCAAAAAGAAAGGGCAAGAGCG--CTCGGCATGACAATGTGCGGAA 421
BSNT_02096___ 422 CGCCGCTCGGGGGAGCCATTTCCGGCCCGATAGTCGGCATGATCG----- 466
||||||||||.||||||.||||.||.|||||.|||||..||||||
BL03799___exu 422 CGCCGCTCGGCGGAGCCGTTTCAGGTCCGATCGTCGGATTGATCGCGATC 471
BSNT_02096___ 467 CAGTGGCGTTCAGCTGGAAGGTATCCTTCGTTCTCATTATGATTAT-TGG 515
||.||| .|.|||||||..|||||.||..|.||.|||||.|| .||
BL03799___exu 472 CATTGG-----GGGTGGAAGGCTTCCTTTGTGTTGATCATGATCATCGGG 516
BSNT_02096___ 516 ATTGATATGGGCAGTGC-TCTGGTTCAAGTTTGTCAAAGAAAAGCCGCAA 564
.||| |.|||.| .||| |||||.|.||.||..|.|||||.||||||
BL03799___exu 517 CTTG-TTTGGAC-TTGCTTCTGGATGAAATTCATGAAAGATAAGCCG--- 561
BSNT_02096___ 565 GAGACGATCAAGGAAGCACCGGCAAT----------AAAAGCAGAAACGT 604
|..||| .||||||.| ||||| |||.||.
BL03799___exu 562 --GCTGAT---------TCCGGCAGTTTGTCTCCTGAAAAG--GAAGCGC 598
BSNT_02096___ 605 CTCCCGGAGAAAAA----------ATTCCGCTCACCTTTTATCTGAAGCA 644
.||| |||||| ||.|||||..|.||||||.|||||||
BL03799___exu 599 GTCC----GAAAAAGGATACCGGCATCCCGCTGTCTTTTTATTTGAAGCA 644
BSNT_02096___ 645 AAAAACGGTCCTGTTCACGGCGTTCGCTTTTTTCGCTTACAACTACATCC 694
....||.||.|||||.|||||||||||.||.||..|.||||||||.||..
BL03799___exu 645 GCCGACCGTGCTGTTTACGGCGTTCGCGTTCTTTTCCTACAACTATATTT 694
BSNT_02096___ 695 TCTTCTTCTTTTTGACATGGTTTCCGAGCTATCTTGTCGAC-GAACGGGG 743
|.|||||.||.||.|||||||||||||||||| ||..|||| |..|||||
BL03799___exu 695 TGTTCTTTTTCTTAACATGGTTTCCGAGCTAT-TTAACGACAGCCCGGGG 743
BSNT_02096___ 744 ATTAAGTGTTGAATCG--ATGAGTGT--CATCACGGTCATCCCGTGGATT 789
..|.||..||.| || |||||.|| || |||.|.||.||||||.||
BL03799___exu 744 GCTGAGCATTCA--CGATATGAGCGTTGCA--ACGATTATACCGTGGGTT 789
BSNT_02096___ 790 TTAGGCTTTATCGGGCTGGCTGCG---GGGGGATTTGTTTCTGACTATGT 836
.|.||.|||.||||.|| |||| |||||||||.||||.||.|||.|
BL03799___exu 790 GTCGGATTTCTCGGTCT---TGCGCTTGGGGGATTTATTTCAGATTATCT 836
BSNT_02096___ 837 GTACAAAAAAACGGCTCGAAAAGGTGTGCTGTTCTCGCGCAAGGTTGTGC 886
||.|||....|||| |.||| ..|.||||.||..|.||.|..||||
BL03799___exu 837 GTTCAAGCTGACGG---GCAAA---CAGATGTTTTCCAGAAAAGCCGTGC 880
BSNT_02096___ 887 TTGTCACATGT-TTG--TTTT--CCTCAGCTGTCCTG-ATTGGTTTTGCC 930
||| ||| .|| |||| |..||||.|| .|| |||||.||||||
BL03799___exu 881 TTG-----TGTGCTGCCTTTTGGCTGCAGCGGT-ATGCATTGGATTTGCC 924
BSNT_02096___ 931 GGGCTTGTGGCAACGACTGCG---GGCGCTGTCACACTGGTCGCTTTGTC 977
|||||||| .||.||.||| ||.|||||..||||.|||||.||.||
BL03799___exu 925 GGGCTTGT---CACTACCGCGTTTGGAGCTGTTGCACTTGTCGCATTATC 971
BSNT_02096___ 978 AGTATTTTTTCTATATTTAACAGGTGCTATC---TATTGGGCTGTCATTC 1024
.||.||.|||.|.|||||.||.|| .||| ||.|||||..|.||.|
BL03799___exu 972 GGTTTTCTTTTTGTATTTGACCGG---CATCACATACTGGGCGATTATAC 1018
BSNT_02096___ 1025 AAGATGTGGTTGATCAAAACAATGTCGGTTCTGTTGGCGGCTTCATGCAT 1074
|.|||.|.|||.|||...|||..|||||....||..||||.|||||||||
BL03799___exu 1019 AGGATATCGTTCATCCGGACAGGGTCGGGGGCGTGAGCGGATTCATGCAT 1068
BSNT_02096___ 1075 TTCCTCGCCAACACGGCAGGAATTATCGGCCCGGCTTTAACCGGATTTAT 1124
||.||.|||||.||..|.||.||||||||.|||.|..|.||.||.|..||
BL03799___exu 1069 TTTCTTGCCAATACATCCGGCATTATCGGTCCGACGGTTACAGGGTACAT 1118
BSNT_02096___ 1125 TGTTGACCAAACAGGCACGTTTTCTGGAGCATTTTTGCTTGCCGGAGGGC 1174
.||.||..|.||.||..|.||..|..|.||.|||||||||||.|||||||
BL03799___exu 1119 CGTCGAGTACACCGGAGCTTTCACAAGCGCCTTTTTGCTTGCGGGAGGGC 1168
BSNT_02096___ 1175 TGGC----------TGTCTTCGCTTCACTTGCTGT----------GATTC 1204
|||| |.|.||.||.||.||| ||| |||.|
BL03799___exu 1169 TGGCGGTGGCAGGTTCTATTTGCGTCGCTT--TGTTTGTGAAACCGATAC 1216
BSNT_02096___ 1205 GTTTTG------TCCGTCCAATCATT--GGCAAGCCAGCGGGAACAGAAG 1246
|||.|| |.|.| |||||..| |..||| |||| ||||
BL03799___exu 1217 GTTCTGAAAGGCTGCCT-CAATCTGTAGGAGAAG---GCGG--ACAG--- 1257
BSNT_02096___ 1247 CTGAGAATCCTGTGTCTTATTAA 1269
|.|.||||| ||||.|
BL03799___exu 1258 --GGGCATCCT-----TTATGA- 1272
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