Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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DNA alignment: BSNT_01186 and BL03793

See Amino acid alignment / Visit BSNT_01186 in genome browser / Return to Orthologue table
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# Program: needle
# Rundate: Mon  8 Mar 2010 06:22:42
# Commandline: needle
#    -asequence dna-align/BSNT_01186___yesP.1.5803.seq
#    -bsequence dna-align/BL03793___yesP.2.5803.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile dna-align/BSNT_01186___yesP-BL03793___yesP.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_01186___yesP-BL03793___yesP.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_01186___yesP
# 2: BL03793___yesP
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 933
# Identity:     707/933 (75.8%)
# Similarity:   707/933 (75.8%)
# Gaps:          36/933 ( 3.9%)
# Score: 2699.0
# 
#
#=======================================

BSNT_01186___      1 TTGACGGGAAATGGGGCTGACGCAATGAAAAAAAGCCGGAGTATAAGAAA     50
                                     .|||.||   |||||||           |||||.
BL03793___yes      1 ----------------GTGAAGC---GAAAAAA-----------AAGAAT     20

BSNT_01186___     51 AGACAATCTGGCGGGATATGCTTTTATTTCTCCGTTTATCATCGGGTTCC    100
                     .||||||.|||||||.|||||.||||||||.||||||||.|||||.||..
BL03793___yes     21 TGACAATTTGGCGGGTTATGCCTTTATTTCCCCGTTTATTATCGGATTTT     70

BSNT_01186___    101 TATGCTTTACGGTGATTCCGATGGGGGCGTCCCTGTTTCTGTCCTTCACG    150
                     |.||||||||.||.|||||||||||.||.||.|||||||||||.||.||.
BL03793___yes     71 TGTGCTTTACCGTCATTCCGATGGGAGCCTCGCTGTTTCTGTCTTTTACA    120

BSNT_01186___    151 AGCTATGACTTGTTTACGGCGCCGAAATGGATCGGGCTCGACAACTTTAA    200
                     |||||.||..||||.||..||||.||||||.||||..|.|||||||.|||
BL03793___yes    121 AGCTACGATCTGTTCACCCCGCCCAAATGGGTCGGCTTTGACAACTATAA    170

BSNT_01186___    201 GGAAATGTTTACGGGTGACGAAAAGTATTGGCAGTCTCTGAAGGTGACGT    250
                     ||..|||.|.||.|.|||.|||||.||.|||...||.|||||.||.||||
BL03793___yes    171 GGCGATGCTGACCGATGATGAAAAATACTGGGGTTCGCTGAAAGTTACGT    220

BSNT_01186___    251 TTACGTATGTGCTTGCCGGGGTTCCGCTCCGCCTCGGCTTCGCGCTTTTT    300
                     ||...||.|||||.|||||.||.|||||.|||||||..||.||||||||.
BL03793___yes    221 TTTATTACGTGCTCGCCGGTGTGCCGCTGCGCCTCGCGTTTGCGCTTTTC    270

BSNT_01186___    301 ATCGCTGTCATTTTAAACAATGCAGCAAAAGGAACGGCTATTTACAGAAC    350
                     |||||.||.|||||.||||..||.|.|||.||...||..||||||.|.||
BL03793___yes    271 ATCGCGGTGATTTTGAACAGAGCCGAAAAGGGTGTGGGCATTTACCGGAC    320

BSNT_01186___    351 GCTCTTTTATCTGCCTTCGATCATCGGCGGGAGCGTCGCCGTGGCGATTA    400
                     ||||||||||||.||.||.|||||||||||.|||||.||.||.|||||||
BL03793___yes    321 GCTCTTTTATCTCCCGTCCATCATCGGCGGCAGCGTGGCGGTTGCGATTA    370

BSNT_01186___    401 TGTGGCGCAATATTTTTGGCAATGACGGGGTCATCAATGCGCTGCTGTTT    450
                     |||||||||||.|.||||||||||||||.||||||||||.|||..||||.
BL03793___yes    371 TGTGGCGCAATGTATTTGGCAATGACGGTGTCATCAATGGGCTTTTGTTC    420

BSNT_01186___    451 TTTTTCGGGATTGATCAA-AAAATTCTTTGGTACCAGAATCCGACAAGTG    499
                     ||..|.||..|||| ||| ||.|||.|||||||.|||.|.||||||||.|
BL03793___yes    421 TTCCTTGGTTTTGA-CAAGAAGATTTTTTGGTATCAGGACCCGACAAGCG    469

BSNT_01186___    500 CGCTGTGGACATTGATTCTGCTGTCCGTCTGGCAGTTCGGGTCGTCAATG    549
                     |..|||||||.||||||||..||||.||.|||||||||||.||.||.|||
BL03793___yes    470 CATTGTGGACCTTGATTCTTTTGTCTGTGTGGCAGTTCGGCTCTTCCATG    519

BSNT_01186___    550 CTGATTTTTCTGGCCGGGCTGAAAAACATTCCGTCTTCGTATTTGGAAGC    599
                     |||||.|||||.|||||..|||||||.||||||.|...||||..||||||
BL03793___yes    520 CTGATCTTTCTTGCCGGATTGAAAAATATTCCGCCGATGTATCAGGAAGC    569

BSNT_01186___    600 GGCAAGTGTGGATGGGGCAAATCGGGTGCAGC-GTTTCTTCAAGATCACG    648
                     ||||||.||.|||||.|||||..||.|.|||| ||||.||| ..||.|||
BL03793___yes    570 GGCAAGCGTTGATGGTGCAAACAGGTTTCAGCGGTTTTTTC-TCATTACG    618

BSNT_01186___    649 CTTCCGATCCTTACACCGATTATTTTCTTTAATCTTGTGATGCAGACGAT    698
                     ||.|||.|.||.|..|||||.||.||.||||||.|.|||||||||||.||
BL03793___yes    619 CTCCCGCTTCTCAGCCCGATCATCTTTTTTAATTTGGTGATGCAGACCAT    668

BSNT_01186___    699 TTCTGCTTTTATGACATTTACACCTGCCTATATCATTTCGAAGGGCGAGG    748
                     |||.||.||.|||||.|||||.||.|||||.||.|||||.||.||.||.|
BL03793___yes    669 TTCAGCCTTCATGACCTTTACGCCGGCCTACATTATTTCAAAAGGGGAAG    718

BSNT_01186___    749 GCGGGCCGCTTGACGGGACACTTCTCTATTCGCTCTATTTGTTCCAGCGT    798
                     ||||.||||||||||||||.|||||.|||||.|||||||||||||||||.
BL03793___yes    719 GCGGTCCGCTTGACGGGACGCTTCTGTATTCCCTCTATTTGTTCCAGCGG    768

BSNT_01186___    799 GCGTTTAACTATTTTCAAATGGGCTACGCATCGGCGATGGCGTGGGTCAT    848
                     |||||.||||.|||.||||||||||||||.|||||.|||||.|||||.||
BL03793___yes    769 GCGTTCAACTTTTTCCAAATGGGCTACGCTTCGGCTATGGCATGGGTGAT    818

BSNT_01186___    849 GCTTGTCATTGTCGGGCTGATTACGCTCATATTGTTTAAAACATCGTCAT    898
                     |||..||.|..||||.||..|.||..||||||||||.|||||.||.||.|
BL03793___yes    819 GCTGATCCTGATCGGCCTTGTCACATTCATATTGTTCAAAACTTCATCCT    868

BSNT_01186___    899 ATTGGGTTCATTACGAGTCAAAGGAGGAATGA-    930
                     ..|||||.||||||||.||.|||||||..| | 
BL03793___yes    869 TATGGGTGCATTACGAATCGAAGGAGGGGT-AG    900


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