Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_01199 and BL03786
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:22:43
# Commandline: needle
# -asequence dna-align/BSNT_01199___yesW.1.5803.seq
# -bsequence dna-align/BL03786___yesW.2.5803.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_01199___yesW-BL03786___yesW.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_01199___yesW-BL03786___yesW.aln
########################################
#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_01199___yesW
# 2: BL03786___yesW
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 1921
# Identity: 1350/1921 (70.3%)
# Similarity: 1350/1921 (70.3%)
# Gaps: 128/1921 ( 6.7%)
# Score: 4620.0
#
#
#=======================================
BSNT_01199___ 1 ATGATTACACGAAGGAAACG---------CATGTTTACCG------CTGT 35
||||..|.|.|||.||||.| |.||||..||| ||.|
BL03786___yes 1 ATGAAAAAAGGAAAGAAAAGGTGGAAGAACCTGTTGGCCGCGTCATCTCT 50
BSNT_01199___ 36 TACGTTGCTGGTCTTGTTGGTGATGGGAATCTCTGTATGTCCTGTGAAAG 85
| ||..|..||..|.|.||||..||..||| |.|.|.|||
BL03786___yes 51 T---TTATTAATCACGCTAGTGACCGGCTTCT---------CGGAGCAAG 88
BSNT_01199___ 86 CTGAAGG-------------GGCAGCGC------GGCAGATGGAAGCGCT 116
||| ||| |||.|||| ||||.||||||.||||
BL03786___yes 89 CTG-AGGCAGACGGGCGGACGGCTGCGCAGGCAAGGCAAATGGAATCGCT 137
BSNT_01199___ 117 GAACCGGGGGATTGTAGCGGTCAAGACAG---ACGGGGGCATTTTTGTCA 163
.|||.|||||.||||.||.||.||.||.| ||||.| |.|||||||
BL03786___yes 138 TAACAGGGGGCTTGTCGCTGTTAAAACGGGGAACGGTG---TCTTTGTCA 184
BSNT_01199___ 164 GCTGGCGGTTTCTTGGAACTGAAAACG-CATCTGTTTTGTTCAATGTGTA 212
||||||||.||||.|||||.| |..|| |.|||||||..||.||||||||
BL03786___yes 185 GCTGGCGGCTTCTGGGAACCG-AGCCGTCTTCTGTTTCATTTAATGTGTA 233
BSNT_01199___ 213 CAGAGACGGGCAAAAACTGAATGCTGCGCCTGTCAAA---ACCACGAACT 259
..||.||||..|.||.|||||.|.|.|.||..|.|.| |.|||.||||
BL03786___yes 234 TCGAAACGGAAAGAAGCTGAACGGTTCTCCGATTACATCGAGCACAAACT 283
BSNT_01199___ 260 ATGTGGATAAAAACGGTTCGGCGGG---CTCAA---CGTATAC--GGTTC 301
||..||||..| |||||| .|.|| |||.||| |||.|
BL03786___yes 284 ATCAGGATGCA--------GGCGGGGATTTGAACGCCGTTTACCAGGTGC 325
BSNT_01199___ 302 GGGCTGTTGTAAACGGTACCGAACAGCCGGCTTCTGAAAAAGCCTCCGTA 351
|.||.|||.|.|||||.|..||.|||.|..|||||||| ||||
BL03786___yes 326 GCGCCGTTTTGAACGGCAGGGAGCAGGCTCCTTCTGAA------TCCG-- 367
BSNT_01199___ 352 TGGGCG--------CAGCCGTATCATTCCGTCCCGCTGGATAAACCGGCT 393
|.|||| .|.|..|||.|.||.||.||||||.|.||||||||.
BL03786___yes 368 TCGGCGTATTGAATAAACAATATAAATCTGTTCCGCTGCAAAAACCGGCC 417
BSNT_01199___ 394 GGCGGCACGACGCCAAAAGGTGAAGCTTACACGTACAGCGCTAATGACGC 443
||.||.|..|||||..|.||.|...|.|||||.||||||||.|||||.||
BL03786___yes 418 GGAGGAAAAACGCCTGATGGGGTGTCATACACATACAGCGCCAATGATGC 467
BSNT_01199___ 444 AAGTGTTGGCGATGTGGATGGTGACGGGCAATACGAGCTGATCCTGAAAT 493
.||.||.|||||..|.|||||.|||||.|||||.||..|.||.||.||.|
BL03786___yes 468 GAGCGTAGGCGACCTTGATGGAGACGGCCAATATGAAATCATTCTCAAGT 517
BSNT_01199___ 494 GGGACCCGTCTAACTCAAAAGACAATTCACAGGATGGCTATACGGGTGAC 543
||||.||.||.||.|||||.||.|||||||||||.||.||.|||||.||.
BL03786___yes 518 GGGATCCTTCCAATTCAAAGGATAATTCACAGGACGGATACACGGGAGAT 567
BSNT_01199___ 544 GTGCTAATTGACGCGTATAAACTGGATGGCACAAAGTTATGGCGGATCAA 593
|||||.||||||||.||.||.||.||.|||||.|.|.|.|||.|.|||||
BL03786___yes 568 GTGCTGATTGACGCATACAAGCTTGACGGCACCATGATGTGGAGAATCAA 617
BSNT_01199___ 594 TCTCGGCAAAAACATCAGAGCGGGCGCGCACTACACCCAGTTTATGGTGT 643
.||.||||||||.||..|.||.|||||.||.||.||.||||||.|.||.|
BL03786___yes 618 CCTTGGCAAAAATATTCGCGCCGGCGCCCATTATACGCAGTTTCTCGTCT 667
BSNT_01199___ 644 ATGACCTTGATGGTGACGGAAAAGCGGAAGTGGCAATGAAAACGGCAGAC 693
|||||.||||.||.||.||||||||||||.|.||.|||||.|||||||||
BL03786___yes 668 ATGACTTTGACGGCGATGGAAAAGCGGAAATCGCCATGAAGACGGCAGAC 717
BSNT_01199___ 694 GGGACAAAAGACGGCACGGGCAAAGTAATTGGAAATGCCAATGCTGATTA 743
|||||.||.|||||||..||.||.||.||.||.|||||.||.||.|||||
BL03786___yes 718 GGGACGAAGGACGGCAAAGGGAAGGTGATCGGCAATGCAAACGCCGATTA 767
BSNT_01199___ 744 CAGAAATGAACAGGGGCGTGTGCTTTCAGGCCCTGAATATCTCACTGTGT 793
|.|.||||..||.||.||..|..|.|||||.|||||.|||.|.||.||.|
BL03786___yes 768 CCGCAATGCCCAAGGCCGAATTTTGTCAGGGCCTGAGTATTTGACGGTTT 817
BSNT_01199___ 794 TTCAAGGTTCAACCGGGGAAGAGCTTGTCACCGCAAATTTTGAACCGGCG 843
||.||||....||.||.|..||||||...||.|..||.|..|||||.||.
BL03786___yes 818 TTAAAGGCGATACAGGCGCTGAGCTTACAACGGTCAACTACGAACCTGCC 867
BSNT_01199___ 844 CGCGGCAATGTGTCGGATTGGGGAGACAGCTACGGCAACCGTGTTGACCG 893
||.||.|||||..|.||||||||||||||||||||||||.|.||||||||
BL03786___yes 868 CGGGGAAATGTAGCCGATTGGGGAGACAGCTACGGCAACAGGGTTGACCG 917
BSNT_01199___ 894 TTTTCTCGCCGGCATTGCCTACCTTGATGGACAGCGGCCGAGCCTGATCA 943
.|||||.|||||..|.||.||||||||.||..||||||||||..|..|||
BL03786___yes 918 CTTTCTGGCCGGTGTCGCATACCTTGACGGGGAGCGGCCGAGTTTTGTCA 967
BSNT_01199___ 944 TGACCAGAGGGTATTACGCTAAAACCATGCTAGTTGCCTATAACTTCAGG 993
||.|..|.||.||||||.|.|.|||..|||||||.||.||.||||||||.
BL03786___yes 968 TGGCACGCGGTTATTACACGAGAACAGTGCTAGTCGCTTACAACTTCAGA 1017
BSNT_01199___ 994 GATGGAAAGCTGTCAAAGCTTTGGACGCTGGACTC-----CTCAAAGTCA 1038
|..|||||||||.|.|||||.||||||.|.||.|| ||| |.
BL03786___yes 1018 GGCGGAAAGCTGACCAAGCTGTGGACGTTCGATTCGGATGCTC-----CC 1062
BSNT_01199___ 1039 GGAAATGAAGCGTTTGCCGGACAGGGGAATCACAACCTGAGCATCGCGGA 1088
|||||||..||.|.||||||.||.||.||.||||...|||||.||||.||
BL03786___yes 1063 GGAAATGGCGCCTATGCCGGTCAAGGCAACCACAGTTTGAGCGTCGCCGA 1112
BSNT_01199___ 1089 CGTTGACGGGGATGGAAAAGATGAGATTATTTTCGGCTCAATGGCTGTTG 1138
|||||||||.||||||||.||.|||||.||.|.|||..|.||||||||.|
BL03786___yes 1113 CGTTGACGGAGATGGAAAGGACGAGATCATATACGGAGCGATGGCTGTCG 1162
BSNT_01199___ 1139 ATCATGACGGGAAAGGCATGTACTCGACCGGCTTAGGCCATGGGGATGCC 1188
||||||||||.||||||.|.|||||.|||||||..||.||||||||||||
BL03786___yes 1163 ATCATGACGGAAAAGGCCTCTACTCAACCGGCTGGGGACATGGGGATGCC 1212
BSNT_01199___ 1189 CTCCATACAGGAGATCTTGATCCGGGCCGGCCGGGGCTTGAGGTGTTTCA 1238
.|.||||||||..|.||.||.|||....||||.||.||.||.||.||.||
BL03786___yes 1213 ATGCATACAGGGAACCTGGACCCGTCAAGGCCTGGACTGGAAGTCTTCCA 1262
BSNT_01199___ 1239 AGTTCATGAGGACAAAAATGCAAAATACGGCTTATCTTTCCGGGATGCTG 1288
|||.|||||..|||..|||.|....||.|||||.||.|||||.|||||..
BL03786___yes 1263 AGTCCATGAAAACAGCAATTCTCCTTATGGCTTGTCCTTCCGCGATGCGA 1312
BSNT_01199___ 1289 CAACCGGAAAAATCCTTTGGGGCGTTTATGCCGGCAAGGATGTAGGCCGG 1338
.|||.|||||.|||.|.|||||.|||.|.||.||.||.|||||.||.||.
BL03786___yes 1313 AAACAGGAAAGATCATCTGGGGAGTTCACGCAGGTAAAGATGTCGGACGC 1362
BSNT_01199___ 1339 GGAATGGCTGCTGATATTGACCCGAGTTATCCG--GGACAGGAAGTGTGG 1386
||||||||.||||||||.||.|||.|.|| || |||..||||||.|||
BL03786___yes 1363 GGAATGGCCGCTGATATCGATCCGCGCTA--CGAAGGAGCGGAAGTATGG 1410
BSNT_01199___ 1387 GCAAACGGTTCTCTCTACTCAGCGAAAGGGGTCAAAATCGGAAGCGGGGT 1436
||.|||||...|||.||..|.||.|||||.||.||||||||||.|....|
BL03786___yes 1411 GCGAACGGCAGTCTTTATACGGCAAAAGGCGTAAAAATCGGAAACACATT 1460
BSNT_01199___ 1437 TCCGTCCTCGACCAACTTCGGCATCTGGTGGGACGGCGATCTGCTCCGGG 1486
.||.||.||.||.|||||||||||||||||||||||||||||.|...|.|
BL03786___yes 1461 GCCTTCATCAACGAACTTCGGCATCTGGTGGGACGGCGATCTCCAAAGAG 1510
BSNT_01199___ 1487 AACAGCTGGACAGCAACCGAATTGATAAGTGGGATTATCAAAA--CGGCG 1534
|.|..||||||||||||.||||||||||.|||||||||||||| | |||
BL03786___yes 1511 AGCTTCTGGACAGCAACAGAATTGATAAATGGGATTATCAAAATTC-GCG 1559
BSNT_01199___ 1535 TATCGAAAAATGTGCTGACTGCATCAGGCGCAGCGGCTAACAACGGCACA 1584
.|.||..||.| |||||||.||.||.||.||..||||.||.|||||.|||
BL03786___yes 1560 AACCGTCAACT-TGCTGACAGCGTCCGGAGCTTCGGCAAATAACGGAACA 1608
BSNT_01199___ 1585 AAAGCAACACCGGCGATTCAGGCTGATCTGCTCGGTGATTGGCGGGAGGA 1634
|||||.||.|||.|..|.|||||.||..|.|||||.||.|||||.||.||
BL03786___yes 1609 AAAGCGACGCCGTCCCTGCAGGCGGACATTCTCGGAGACTGGCGCGAAGA 1658
BSNT_01199___ 1635 AGTGGTGTGGAGAACGGAGGACAGCAGTGCTCTTCGCATTTACACGACGA 1684
||||||.|||.||.|||||||||||||.|..||.|||||.||||||||||
BL03786___yes 1659 AGTGGTCTGGCGAGCGGAGGACAGCAGCGAACTGCGCATCTACACGACGA 1708
BSNT_01199___ 1685 C---CATTCCGACTGAGCACAGGCTGTATACGCTGATGCACGATCCGGTG 1731
| |.| |||.||||||.|..||||||||||||||||.|||.|.||.
BL03786___yes 1709 CAGACGT---GACGGAGCACCGCATGTATACGCTGATGCATGATGCAGTC 1755
BSNT_01199___ 1732 TACCGGCTTGGCATCGCCTGGCAAAATGTCGCCTATAACCAGCCGCCGCA 1781
||.||.||.||.|||||||||||.|||||||.|||.||||||||.|||||
BL03786___yes 1756 TATCGCCTCGGTATCGCCTGGCAGAATGTCGGCTACAACCAGCCTCCGCA 1805
BSNT_01199___ 1782 CACAAGCTTCTTTTTAGGAGACGGCATGGCGGAACAGCCA------AAAC 1825
|||..||||.|.||||||.||.|||||| |||.|| ||.|
BL03786___yes 1806 CACCGGCTTTTATTTAGGCGAAGGCATG------CAGACACCGGAGAAGC 1849
BSNT_01199___ 1826 CGAATATGTATACGC-CTTAA 1845
||||.||.|||||.| ||.|
BL03786___yes 1850 CGAACATTTATACACGCTGA- 1869
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