Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_01202 and BL03784
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:22:43
# Commandline: needle
# -asequence dna-align/BSNT_01202___yesY.1.5803.seq
# -bsequence dna-align/BL03784.2.5803.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_01202___yesY-BL03784.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_01202___yesY-BL03784.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_01202___yesY
# 2: BL03784
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 792
# Identity: 412/792 (52.0%)
# Similarity: 412/792 (52.0%)
# Gaps: 240/792 (30.3%)
# Score: 883.0
#
#
#=======================================
BSNT_01202___ 1 -------ATGGCAAATCA------TATTTATCTTGCCGGCGATTCGACTG 37
|||.||| || |.|| |||.||.||||||||.||.|
BL03784 1 GTGACGGATGACAA--CACGACGGTCTT--TCTGGCGGGCGATTCCACGG 46
BSNT_01202___ 38 T-TCAAACG--TATGGAGACAGCACAAAT------CAAGGG--GGCTGGG 76
| || || |||| |||.|...| |.|.|| |||||||
BL03784 47 TCTC---CGATTATG-----AGCCCGGCTATGCGCCGATGGCAGGCTGGG 88
BSNT_01202___ 77 GGCAGTTTCT---CGGCTCGCATCTGCCGGAGCATATTCAAGTGATCAAC 123
||||.|||.| ||||| ||.|..||||..|.|| .||.|||.||
BL03784 89 GGCAATTTTTAGGCGGCT---ATTTCTCGGATGAAAT---CGTCATCGAC 132
BSNT_01202___ 124 AGAGCGATCGGGGGA--------AGAAGCTCGAAAACATTTGTGGAAGA- 164
| |.|.||.|| ||||||.||||||..||||||||.||
BL03784 133 A-----ACCAGGCGAAACGCGCGAGAAGCGCGAAAAGTTTTGTGGATGAA 177
BSNT_01202___ 165 -GG--GCAGGCTTCAGGCAATCCTTGATGTGATTGAGCCGGATGA---TT 208
|| ||.||||.| ||| .||||.|||||||| ..
BL03784 178 CGGTCGCTGGCTAC-----------GAT---TTTGAACCGGATGAAACGG 213
BSNT_01202___ 209 GGC-------TGTTCGTGCAGATGGGCCATAATGACGCGTCGAAAAATAA 251
||| ||||..|.|||.|.|||..|||||||||...|.||.||
BL03784 214 GGCGACTATTTGTTGATTCAGTTCGGCATTAATGACGCAGGGCAAGAT-- 261
BSNT_01202___ 252 GCCGGAGCGCTACACCGAGCCCTATACTACTTATAAACAATA-TTTAAAG 300
||.|..|||.|.||.||.||.|||||.||.|.|.|..|||| ||.|.|.
BL03784 262 -CCTGCCCGCCATACAGATCCGTATACGACATTTCAGGAATACTTGAGAA 310
BSNT_01202___ 301 CAGTATAT---CGCAGGCGCACGGGAAAAAGGCGCCCATC---------- 337
|| ||||| |..| ||.||.||||||||.|..|.||
BL03784 311 CA-TATATTAACAAA---GCCCGCGAAAAAGGAGGACGTCATGTGCTCGT 356
BSNT_01202___ 338 CGCTTCTCATTACCCCCGTAGCCCGCTTTCATTACGAAAATGGCGTGTTT 387
|.|||||||...|...||||.| .||.|.|||||.|||||.||.
BL03784 357 CACTTCTCAAAGCAAACGTACC-------TATGATGAAAAGGGCGTTTTC 399
BSNT_01202___ 388 TTGAAC---------GATTTTCCAGATTACTGCATTGCCATGAAGCAGAC 428
|..||| ||.|.||| || || ||.||| ||||
BL03784 400 TACAACAGCATCGGAGAATATCC-GA--AC------GCAATG----AGAC 436
BSNT_01202___ 429 GGCTGAAGAGGA--------GAATGTCCAGCTCATTGATCTGATGGAGAA 470
.|||| ||| |||.||.|.|.|.||.|||.|.|...|.||
BL03784 437 AGCTG----GGACGGGAAATGAACGTTCCGGTGATCGATTTAAACAAAAA 482
BSNT_01202___ 471 AAGCCTTGCTTTCTTTAC--TGAGAAGGGCGAGGAA-AAAGTATACACCT 517
||||.|||..| .|||| .||||..||||..||| ..|.||.|.||.|
BL03784 483 AAGCATTGAAT--ATTACAACGAGATCGGCGTTGAAGCGACTAAAAACGT 530
BSNT_01202___ 518 ATTTTATGATTTCAGAA---GGGATTAA---CGATT-------------- 547
| |||||| ||||.|.| ||||..|| |||.|
BL03784 531 A-TTTATG-TTTCTGGAACCGGGAGAAAGCCCGAATTATCCGGAAGGCAT 578
BSNT_01202___ 548 -----ACA---CGCATTTT-ACAAAAAAA----GGCGCAAATGAAATGGC 584
||| .||||||| || .| |||||.||..||.||||
BL03784 579 CCAGGACAGGGTGCATTTTCAC-----GAGTTCGGCGCCAACCAATTGGC 623
BSNT_01202___ 585 GAAACTTGTGGCAAAAGGCAT----AAAGGAG----CTCGG--------- 617
||||| | |.||||| |||.|
BL03784 624 --------------AAGGC-TCGTCACAGGAGAAATCTCCGATTTGAATA 658
BSNT_01202___ 618 -----CCTGCCATTGACAGAATCGATCATCAAAGAAAGGTGA 654
|| || |||.|.|.|||.|||..|||.||
BL03784 659 TATATCC-GC---TGAAACACTCGCTCAAGAAATAA------ 690
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