Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_01206 and BL03780
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Amino acid alignment /
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:22:44
# Commandline: needle
# -asequence dna-align/BSNT_01206.1.5803.seq
# -bsequence dna-align/BL03780___yesZ.2.5803.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_01206-BL03780___yesZ.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_01206-BL03780___yesZ.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_01206
# 2: BL03780___yesZ
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 2037
# Identity: 570/2037 (28.0%)
# Similarity: 570/2037 (28.0%)
# Gaps: 1260/2037 (61.9%)
# Score: 1650.0
#
#
#=======================================
BSNT_01206 0 -------------------------------------------------- 0
BL03780___yes 1 ATGAACGGAAAGCTGTACCATGGCGCTTGCTTTTATCCCGAATTGTGGGA 50
BSNT_01206 0 -------------------------------------------------- 0
BL03780___yes 51 TGAGGATGTGCTGGATGAAGATATCAGGATGATGGAGCGAATCGGGATCA 100
BSNT_01206 0 -------------------------------------------------- 0
BL03780___yes 101 ATGTTGTCAGAATCGGGGAGTTTGCCTGGTCAAGGATGGAGCCTGAAAAA 150
BSNT_01206 0 -------------------------------------------------- 0
BL03780___yes 151 GGAAGGATCGATGTCGGATTTTTTGCAGACGTCATCCGAAAGCTCCGCGA 200
BSNT_01206 0 -------------------------------------------------- 0
BL03780___yes 201 CAACAAAATTGAAACGGTCATGTGCACGCCGACTGCGACGCCGCCGATCT 250
BSNT_01206 0 -------------------------------------------------- 0
BL03780___yes 251 GGCTGACCCACGGGCACCCGGAAAGAATGCATGTGAATGAAAAAGGGGAG 300
BSNT_01206 0 -------------------------------------------------- 0
BL03780___yes 301 ACGATGGGACACGGTTCGAGGCAGCATGCCTGCACAAACCATCCCTATTT 350
BSNT_01206 0 -------------------------------------------------- 0
BL03780___yes 351 CAGAGAGCGGGCCCGGCTGATCATCAAACATATCGCCAAAGAGATCGGAG 400
BSNT_01206 0 -------------------------------------------------- 0
BL03780___yes 401 AACTGCCGGGATTGATCGGATGGCAGCTTGACAATGAATTCAAATGCCAT 450
BSNT_01206 0 -------------------------------------------------- 0
BL03780___yes 451 GTCGCAGAATGCATATGTGAAACGTGCCGCACATTATGGCACAAATGGCT 500
BSNT_01206 0 -------------------------------------------------- 0
BL03780___yes 501 GGAAGACCGCTATCAGACGATTGACCGTCTGAATGAGGCATGGGGTACGG 550
BSNT_01206 0 -------------------------------------------------- 0
BL03780___yes 551 GCGTATGGAGCGAAACGTATCAGTGCTTCGAGCAAGTCCCGCAGCCCGGA 600
BSNT_01206 0 -------------------------------------------------- 0
BL03780___yes 601 CCGACCCCGTTTTTGCATAATTCTTCTTTAAGGACAATGTATCAGCTGTT 650
BSNT_01206 0 -------------------------------------------------- 0
BL03780___yes 651 TTCGATGGACAAGATTTCTGAATTTGCGCGTGAACAGGCTGAGGTGATCA 700
BSNT_01206 0 -------------------------------------------------- 0
BL03780___yes 701 GAGCATACTCCGATGCCCCGATCACCCATAATAGCAGCGTCATGTTCGGC 750
BSNT_01206 0 -------------------------------------------------- 0
BL03780___yes 751 GTTGATCATGAAGACCTTTTCAAGAGCCTTGATTTTGCCTCGTTTGATAC 800
BSNT_01206 0 -------------------------------------------------- 0
BL03780___yes 801 GTACGCCAGCCAGGAAAACAGTCAAGCCTTTTTGTTTAATTGTGATTTAT 850
BSNT_01206 0 -------------------------------------------------- 0
BL03780___yes 851 GGAGAAACATCAAAAAAGGACGGCCGTTTTGGATTATGGAGACGAGCCCT 900
BSNT_01206 0 -------------------------------------------------- 0
BL03780___yes 901 TCCTACAGCGCTTCGCTTGAAAGCTATGCGGCGCCTCATCAAAACGGCTA 950
BSNT_01206 0 -------------------------------------------------- 0
BL03780___yes 951 TTTGAAAGCTGAAGCGGTTTCTTCTTATGCTCTTGGCGGAGCCGCGTTCT 1000
BSNT_01206 0 -------------------------------------------------- 0
BL03780___yes 1001 GCTATTGGCTGTGGCGCCAGCAGAGAGCCGGGTCTGAACAGCCGCACGGA 1050
BSNT_01206 0 -------------------------------------------------- 0
BL03780___yes 1051 TCAGTGCTCAGCGCATGGGGGGAGCCTGATGTGGGATATGAAAATGTGCT 1100
BSNT_01206 0 -------------------------------------------------- 0
BL03780___yes 1101 CGAAGCCGAGCGGGCAAGACGAGAGGTTGAACACATCATGCTGGCTACGG 1150
BSNT_01206 1 ------------ATGA-----CT------TACTCTGACAGAGCAAAAGCA 27
.||| || ||.||.|||.|.||.||.|..
BL03780___yes 1151 CTCCTTTGCAGGCTGAAACAGCTGTCGTCTATTCGGACCGTGCGAAGGTG 1200
BSNT_01206 28 TTTATTAAAACTGAGCCTCACCGGGGGCTCCGGCATCGTT------CGCT 71
|||.|.|||||.||||||||.|||||.|| ||.|| ||||
BL03780___yes 1201 TTTTTGAAAACGGAGCCTCATCGGGGTCT------TCATTACAGAACGCT 1244
BSNT_01206 72 TGTGACGCATTTTTATGAACG--TATTCTCAACACGGGGATTCACCGTGA 119
..|.||..|.||||||||.|| ||| |.||.|.|||.||||||.|.||
BL03780___yes 1245 GATCACCGAGTTTTATGACCGATTAT--TAAAGATGGGCATTCACAGGGA 1292
BSNT_01206 120 CCTTATTCCGGAA-GGCGCTCCGCTGGACGGCTACCGCTTGCTGTTTACG 168
..|.||||..||| ||.|| |||||||||||||||....|||||||||||
BL03780___yes 1293 TGTCATTCTTGAAGGGAGC-CCGCTGGACGGCTACAAACTGCTGTTTACG 1341
BSNT_01206 169 CCATTTGTGCCGTATTTGT----CTGCTGAATTTATCAAAAAAGCTTCG- 213
||.|||.|.|..|||.| | ||||| |||||||||||||| ||
BL03780___yes 1342 CCGTTTATTCATTATCT-TCCCCCTGCT---TTTATCAAAAAAGC--CGA 1385
BSNT_01206 214 -GCATTCGC-TGAAGCTGGCGGCATCTGGATCACCGGGCCGCTGACAGGA 261
|||||.|| ..|||| ||||||||.|||||..|.||.||||||||.||.
BL03780___yes 1386 AGCATTTGCACAAAGC-GGCGGCATTTGGATTGCGGGTCCGCTGACGGGC 1434
BSNT_01206 262 GGGCGCACATGCGAG---CATACCATTCATACCGATTGCGGACTTGGCGA 308
||..|.||| ||| |||||.|||||.||.||||||||| |||| |.
BL03780___yes 1435 GGAAGAACA---GAGCACCATACGATTCACACTGATTGCGGA-TTGG-GG 1479
BSNT_01206 309 ACTTGAGAAAA--CGTCAGGGATCAAAACACTTTTTACCTTTCCGATGAA 356
.|||.|||||| ..||.||..|.|||||.||.|||||.||.||||||.|
BL03780___yes 1480 CCTTTAGAAAAATGTTCTGGTGTTAAAACGCTGTTTACATTCCCGATGGA 1529
BSNT_01206 357 TGAGAACGTGAATACA---GGAAAAGCGTTTGGCATCACGGCGCCGCTCG 403
|||| || |||..|| ||||..|||||||||.|.|.|||||||||..
BL03780___yes 1530 TGAG--CG-GAACTCAAGCGGAACGGCGTTTGGCGTAAAGGCGCCGCTGA 1576
BSNT_01206 404 GACTATGGAGCACGGTGTTTGACACAGAGAGCGGAAACA---CCCTTGGT 450
|..|.||||||.|.||.||||| ||...||||.|.|| |..|.||.
BL03780___yes 1577 GCTTGTGGAGCGCTGTTTTTGA---AGCCGGCGGCACCAAGGCTGTCGGG 1623
BSNT_01206 451 ACGGTTGAAGCAGGACCGGGGGCGGGCCATGCTTTTCTGACGGAACGGAA 500
|.|.||||...|||.||||.|.|.|||.|.||.||..|.|||||||..||
BL03780___yes 1624 ATGATTGAGAAAGGCCCGGCGTCAGGCAAAGCGTTCATCACGGAACACAA 1673
BSNT_01206 501 TTACGGCGAGGGGAAAATTGTCATGCTGGGCTCGCTTCCATCCGGGAAAG 550
.|.|||..|.||.|||||.||||||||.||.|||.|.||..|.||..|||
BL03780___yes 1674 ATGCGGAAAAGGCAAAATCGTCATGCTCGGGTCGATGCCGGCAGGCGAAG 1723
BSNT_01206 551 AAGGGGATGCGATGCTGGAAGCGCTCGTTAGGCATTACGCGGAGGAAGCT 600
..|||||....|||.||.||..|||..|.||.|||||.||.||.|||||.
BL03780___yes 1724 CGGGGGACATCATGATGAAAAAGCTGATCAGCCATTATGCCGAAGAAGCG 1773
BSNT_01206 601 GTTATTTCCAGCCG--GTCGGATGTTACGCCCGGCACAATCGTTGCCCCG 648
|...|| .|||.| ..|.|||||.||.|||||.|||.||||.||.||.
BL03780___yes 1774 GGCGTT--GAGCAGAAAACCGATGTCACTCCCGGAACAGTCGTCGCGCCC 1821
BSNT_01206 649 CGCAAAGGCGATAACGGCCTTGTGTGGATCATCGTGAATATGGATGGAAA 698
||.|||||.|...||||.|||||.|||.||.|..|.||||||||.||.||
BL03780___yes 1822 CGGAAAGGAGCAGACGGTCTTGTCTGGGTCGTGATCAATATGGACGGCAA 1871
BSNT_01206 699 AGGAGGAAGTGTGACAC-TGCCGGAAGCGGGAACAGATCTGTTGACGCAC 747
||||||....||||||| ||.|||.|.| |||||.|||||.||..| |
BL03780___yes 1872 AGGAGGCGCAGTGACACTTGACGGCAAC-GGAACCGATCTTTTATC---C 1917
BSNT_01206 748 CGCTTGGAAAAGGCGGGGAGGCTGGCG-------GTCGGACCGCATGAAT 790
.|| ||||..|.|..|.|.|| .||||.|||||.||.|
BL03780___yes 1918 GGC-------AGGCCCGTAACCGGACGCGTAACACTCGGCCCGCACGACT 1960
BSNT_01206 791 ACCGTGTGATTCAATTTGACAATCACAG-----CTGA 822
||||.||||||...|| ||||.|| .|||
BL03780___yes 1961 ACCGCGTGATTTTGTT-----ATCAGAGAATAAATGA 1992
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