Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_01216 and BL03778
See
Amino acid alignment /
Visit
BSNT_01216 in genome browser /
Return to
Orthologue table
########################################
# Program: needle
# Rundate: Mon 8 Mar 2010 06:22:44
# Commandline: needle
# -asequence dna-align/BSNT_01216___lplA.1.5803.seq
# -bsequence dna-align/BL03778___lplA.2.5803.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_01216___lplA-BL03778___lplA.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_01216___lplA-BL03778___lplA.aln
########################################
#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_01216___lplA
# 2: BL03778___lplA
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 1565
# Identity: 1143/1565 (73.0%)
# Similarity: 1143/1565 (73.0%)
# Gaps: 97/1565 ( 6.2%)
# Score: 4076.5
#
#
#=======================================
BSNT_01216___ 1 ---------ATGAAAATAAGAATGCGAAAAAAATGGATGGCCTTG---CC 38
.||||..| ||| |.||||.||.|||.|.|| || ||
BL03778___lpl 1 ATGGCAAGACTGAAGCT--GAA-GGGAAACAAGTGGCTCGC--TGCACCC 45
BSNT_01216___ 39 GC-------TTGCTGCCATGATGATCGCCGGATGCA--GCCATTCGGAAA 79
|| |||||.| |.|| |||.|||| ||.|.| ||.|
BL03778___lpl 46 GCTGTCTTTTTGCTCC-----TTAT---CGGGTGCAGTGCAAAT--GAGA 85
BSNT_01216___ 80 CATCCAATTCAGCAAGCGATTCGAAA-------GATACGATCAAAATTAT 122
|.||.|| |||..|.|.||...|||| |||.|.||..|.|||||
BL03778___lpl 86 CGTCGAA-TCAAGACGGGAAAGGAAAAGAGAAGGATGCCATTCATATTAT 134
BSNT_01216___ 123 GGCGCCGCTTTTATCGCCGGAAAGCCCGAGTGATAAGAGTCCTTCATTAA 172
|||.|||||..|.|||||||||||.|||.|.||.||.|||||.||.||||
BL03778___lpl 135 GGCTCCGCTCCTCTCGCCGGAAAGTCCGGGAGAAAACAGTCCGTCTTTAA 184
BSNT_01216___ 173 AAGCGCTCGAAAAATACACAGGCAAAGAGATTAAGGTCACATGGGTGCCT 222
|||||||||||||||||||....|||.|.|||||.||.||||||||.||.
BL03778___lpl 185 AAGCGCTCGAAAAATACACGAAAAAACAAATTAAAGTGACATGGGTTCCG 234
BSNT_01216___ 223 GATTCATCCTACAACGACAAATTCAACATCGTCATGGCTTCAGGAGAGAT 272
.|.||.|||||.||.||.||||||||||||||||||||.||.||.||..|
BL03778___lpl 235 AACTCTTCCTATAATGATAAATTCAACATCGTCATGGCCTCGGGGGATTT 284
BSNT_01216___ 273 GCCTCACGCGATTATCATTAAAGATAAGTCAGCC-GGCTTTATCAAGTCT 321
|||.||.||.|||.||.|.|..||.||||| ||| ||.||||||||||||
BL03778___lpl 285 GCCGCAAGCCATTGTCGTCACGGACAAGTC-GCCGGGTTTTATCAAGTCT 333
BSNT_01216___ 322 GTCAAAGCAGGGGCGTTTTGGGAGCTGTCTCCTTATTTAAAAGACTACAA 371
||||||.||||.|||||.||||||||.||.||||||||||||||||||..
BL03778___lpl 334 GTCAAATCAGGCGCGTTCTGGGAGCTTTCACCTTATTTAAAAGACTACCC 383
BSNT_01216___ 372 GAATTTAAGCCAGGCAGATGA-AAAGATTTTGAAGAACAGCTCGGTGAAC 420
|||..|..|..||||.||||| |||| |..||||||||||.||..|.|||
BL03778___lpl 384 GAACCTTGGAAAGGCCGATGAGAAAG-TGATGAAGAACAGTTCCATTAAC 432
BSNT_01216___ 421 GGCGAGGTGTACGGAATCTACAGAACGAGGGATCTGATCAGGGCGTGTAT 470
||||||.|.|||||.||.|||||..|||||||.||.|||.|.||.|..||
BL03778___lpl 433 GGCGAGATTTACGGCATTTACAGGGCGAGGGACCTCATCCGCGCTTCGAT 482
BSNT_01216___ 471 GATCATCAGAACCGACTGGCTGAAAAATGTCGGTCTGGATATGCCGGAAA 520
.|||||||||||.||||||||..||||||||||.|||||.||||||.|||
BL03778___lpl 483 TATCATCAGAACGGACTGGCTCGAAAATGTCGGCCTGGAGATGCCGAAAA 532
BSNT_01216___ 521 CGCTTGATGATTTCTATGAAGTGCTGAAAGCCTTTAAGGAAAAAGATCCT 570
|..|.||.||.||.||.||.||.||||||||.|||||.||||||||.||.
BL03778___lpl 533 CAATCGACGAATTTTACGACGTACTGAAAGCGTTTAAAGAAAAAGACCCC 582
BSNT_01216___ 571 GACGGAAACGGCAAGGATGATACGTATGGCATGGTCGTGCCGAAATGGAT 620
|||||||||||.|||||.||||||||.||||||||.||.|||||||||||
BL03778___lpl 583 GACGGAAACGGAAAGGACGATACGTACGGCATGGTAGTCCCGAAATGGAT 632
BSNT_01216___ 621 GGGACTCGGCAACGGAAGCCCATGGGATGTTCTGCAAATCTGGTTCGGCG 670
|||.||.||||||||.||||||||||||.||.||||.|..||||||||.|
BL03778___lpl 633 GGGGCTAGGCAACGGGAGCCCATGGGATATTATGCAGACATGGTTCGGTG 682
BSNT_01216___ 671 CTCCGAACCGCTACGGTGTTG----AAAACGGAAAGCTGATTTCGGATTT 716
||||.|||||||||||.||.| ||||.||.|| ||.|||.||||.||
BL03778___lpl 683 CTCCAAACCGCTACGGAGTAGACGAAAAAGGGGAA-CTCATTCCGGACTT 731
BSNT_01216___ 717 TACAAC-GAAGGAATACATGAATGCGCTCACGTTTTTT-AAAAAGCTCTA 764
.||||| ||| |||||.|||.|.||||| .|||||||| ||||||||.||
BL03778___lpl 732 CACAACAGAA-GAATATATGGAAGCGCT-GCGTTTTTTCAAAAAGCTGTA 779
BSNT_01216___ 765 TGATGAGGGATTGATCAATAAGGACTTTGCTGTCATGGATTCTGCGAAGT 814
|||||||||..||||||||||.|||||.||.||.||||||||.|||||||
BL03778___lpl 780 TGATGAGGGGCTGATCAATAAAGACTTCGCCGTAATGGATTCAGCGAAGT 829
BSNT_01216___ 815 GGAATGATCCGGTTGTGAAAGGAAAAGCGGGTGTCATCGTTGATACAGGC 864
||||.||||||||.||.|||||.|||||.|||||.|||||.|||||.||.
BL03778___lpl 830 GGAACGATCCGGTCGTCAAAGGGAAAGCTGGTGTGATCGTCGATACCGGT 879
BSNT_01216___ 865 TCAAGAGCGTCTCAAATCCAAAGCGCGATGGAGGAGGCTGAT----GAGT 910
||..|.||.||.||.||.||||||||.||||||||.||.||| ||
BL03778___lpl 880 TCGCGGGCATCGCAGATACAAAGCGCAATGGAGGAAGCCGATCCCGGA-- 927
BSNT_01216___ 911 CGAACAAGGATATCATTGATATCGTCGGCTCGCTTGAGGGACCGAATGGC 960
|||||||||.|.||.|||.||.||||..||.|..|.||.|||||.||.
BL03778___lpl 928 --AACAAGGATGTGATCGATGTCATCGGAACGGTCAAAGGCCCGAAAGGA 975
BSNT_01216___ 961 AAGCGCACCTTCCCGACATCTGGTTCTTCAGGCATGATCGCGATACCAAA 1010
|.|...||.|||||||||||.||.|...|.||.|||||.||.||.||.||
BL03778___lpl 976 ACGTATACATTCCCGACATCAGGATACGCCGGAATGATTGCCATCCCGAA 1025
BSNT_01216___ 1011 ATCAAGCGTCAAAACCGAAAAAGAGCTGAAAGAGGTGCTGTCCTTCCTCG 1060
|.|.|||||||||||.||||||||.||.|||||.|||||...||||.|.|
BL03778___lpl 1026 AGCGAGCGTCAAAACGGAAAAAGAACTAAAAGAAGTGCTCGGCTTCTTGG 1075
BSNT_01216___ 1061 ATAAGATGAATGACAAGGAAGCGCAGATTCTCACGAACAACGGAGTGAAG 1110
|.||.|||||.||..|.||.||.|||||..|..|.||.|||||.||.||.
BL03778___lpl 1076 ACAAAATGAACGATGAAGAGGCACAGATCATTGCCAATAACGGCGTAAAA 1125
BSNT_01216___ 1111 GGCCGCAATTACGAGCTCAAGGACG--GCGTATTCACCTCACTTGAAAAA 1158
||.|||||.||..||||..|..||| ||||| |||.||.|||||||||
BL03778___lpl 1126 GGGCGCAACTATAAGCTTGAAAACGGTGCGTA--CACGTCCCTTGAAAAA 1173
BSNT_01216___ 1159 AACAACAAATCTCTCCTGTATGAGCATGAAGG-CTTGGCACAGTTCAGCA 1207
|||||||||...||.||.||.|||||.||.|| ||| ||.||||||||||
BL03778___lpl 1174 AACAACAAAAAACTGCTTTACGAGCACGAGGGTCTT-GCGCAGTTCAGCA 1222
BSNT_01216___ 1208 TGTCGATTCC-GAAAAGCGAGTATTACATCGAAGACCAGAAAACCAAGCT 1256
||...||||| |||.|..|| ||.||..|.|||.|.||..||.|.|||||
BL03778___lpl 1223 TGGGCATTCCGGAACAAAGA-TACTATGTGGAAAAGCAAGAATCAAAGCT 1271
BSNT_01216___ 1257 CTT------------CCAGCATCGCAAGGACATCATAACCGAAGGAGAAA 1294
.|| .|||..|||||| .|||||.||.|
BL03778___lpl 1272 GTTTAAACACCGTGAACAGATTCGCAA------------AGAAGGGGAGA 1309
BSNT_01216___ 1295 AAATAGCGGTCTTTAACCCGGCTGAGTCGCTTGTATCTGATGTCTATACC 1344
||||.||.||.||.||||||||.||.|||||.||.||.|||||.||.|||
BL03778___lpl 1310 AAATCGCCGTATTCAACCCGGCAGAATCGCTCGTTTCAGATGTATACACC 1359
BSNT_01216___ 1345 CAAAAAGGAGCCCAGCTTGACAACATCATCCTCGACGCGAGAACACAATT 1394
||||||||.||.|||||||||||||||||||||||.||.|.||||||.||
BL03778___lpl 1360 CAAAAAGGGGCACAGCTTGACAACATCATCCTCGATGCCAAAACACAGTT 1409
BSNT_01216___ 1395 TATCATTGGAGAAATTGATGAAAAAGGGTTCGATGATGCGGTGGAGCTTT 1444
||||||.||.||.||.|||||||||||.||..|.||.||.||.|||||||
BL03778___lpl 1410 TATCATCGGCGACATCGATGAAAAAGGCTTTCAAGACGCCGTTGAGCTTT 1459
BSNT_01216___ 1445 GGAAAAAAAGCGGCGGCAATGAACTGATGAAGGACTTGAACAAATTGTAC 1494
||.|.||||||||.|||.|.||..|||||||.||..||||||||...|||
BL03778___lpl 1460 GGTATAAAAGCGGGGGCGAAGATTTGATGAAAGAACTGAACAAACGCTAC 1509
BSNT_01216___ 1495 CAATCGTCAAAATAA 1509
.|...|.|.|||||.
BL03778___lpl 1510 AAGGAGACTAAATAG 1524
#---------------------------------------
#---------------------------------------
Copyright (C) Natto Genome Project, 2009-2010. All rights reserved.