Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_02182 and BL03771
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:23:41
# Commandline: needle
# -asequence dna-align/BSNT_02182___dppB.1.5803.seq
# -bsequence dna-align/BL03771___dppB.2.5803.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_02182___dppB-BL03771___dppB.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_02182___dppB-BL03771___dppB.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_02182___dppB
# 2: BL03771___dppB
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 942
# Identity: 704/942 (74.7%)
# Similarity: 704/942 (74.7%)
# Gaps: 30/942 ( 3.2%)
# Score: 2521.0
#
#
#=======================================
BSNT_02182___ 1 TTGGCGCGATACATGATAAAGCG---TTTTTGG--GCAATGGCAGCTACG 45
.|||||.|.|||||.||.||||| ..|.||| || ||||| ||.
BL03771___dpp 1 ATGGCGGGTTACATCATGAAGCGGCTGCTGTGGATGC--TGGCA---ACC 45
BSNT_02182___ 46 ATTTTGGTGATTACCACCCTGACTTTTGTTCTCATGAAGGTCATTCCCGG 95
|||||||||||.||.||..||||.|||||..|.|||||.||.|||||.||
BL03771___dpp 46 ATTTTGGTGATCACGACATTGACCTTTGTGATGATGAAAGTGATTCCGGG 95
BSNT_02182___ 96 ATCTCCTTTTAACGAGGAGAGAGGCACAAATGAAGCCGTTCAAAAAAATC 145
.|||||.||.||.||.||.|||...||.||.|||||.|||||....||.|
BL03771___dpp 96 CTCTCCCTTCAATGAAGAAAGAAATACGAACGAAGCGGTTCAGCGCAACC 145
BSNT_02182___ 146 TCGAAGCCTACTATCACTTAGACGATCCTCTCATTTTCCAATACATTTTC 195
|.||.||.||||||||..|.||.||.||||||.||.|.||||| |||.
BL03771___dpp 146 TTGAGGCTTACTATCAGCTGGATGAGCCTCTCTTTGTTCAATA---TTTG 192
BSNT_02182___ 196 TACT---TAAAATCCATCATTACATTCGATTTCGGACCTTCAATTAAAAA 242
|||| ||||.||.|||.||||.||.||||||||.||.||.||.||..|
BL03771___dpp 193 TACTATGTAAAGTCGATCGTTACCTTTGATTTCGGGCCGTCGATCAAGCA 242
BSNT_02182___ 243 ACCGTCGGACAGCGTAAATGATATGCTGGAACGCGGATTTCCCGTTTCCT 292
.||.|||.|.|||||.||.||..|||||..|.|.||||||||||||||.|
BL03771___dpp 243 GCCTTCGCAAAGCGTGAACGACTTGCTGTCAAGAGGATTTCCCGTTTCGT 292
BSNT_02182___ 293 TTGAGCTTGGGATGACAGCGATTGTCATTGCTGTGATTTCTGGGCTGGTG 342
|||||||.||||||||.|||.||.|..|.||.||.|||||.||..|.|..
BL03771___dpp 293 TTGAGCTGGGGATGACGGCGCTTATTGTGGCGGTCATTTCCGGAATCGCA 342
BSNT_02182___ 343 CTGGGCGTAATC---GCTGCACTCCGCCGCAATGGGTTTTTGGACTACGC 389
|| ||.|||| |||||.||.||.|..||.||..|..|.|||||...
BL03771___dpp 343 CT---CGGAATCTTTGCTGCGCTGCGGCAAAACGGCATCATCGACTATAT 389
BSNT_02182___ 390 CGCGATGAGTCTTGCAGTACTCGGCATCTCCATCCCGAATTTTATTCTGG 439
.|||||||...||||.|||||||||||.||..|.||.||.||||||.|||
BL03771___dpp 390 AGCGATGACCATTGCCGTACTCGGCATTTCGGTTCCCAACTTTATTATGG 439
BSNT_02182___ 440 CAACATTGCTCATTCAGCAATTTGCTGTCAATCTCAAACTAT-TTCCCGC 488
||||.|||||.||.|||||||||||.||.||| |..||| || |||||.|
BL03771___dpp 440 CAACCTTGCTGATACAGCAATTTGCCGTTAAT-TGGAAC-ATATTCCCTC 487
BSNT_02182___ 489 TG-CCACATGGACGAGCCCGATTCATATGGTGCTTCCGACCGCAGCGCTT 537
.| |.|||||||||||||||.|||||||||||||||||||.||.||..|.
BL03771___dpp 488 CGTCGACATGGACGAGCCCGCTTCATATGGTGCTTCCGACTGCGGCTTTG 537
BSNT_02182___ 538 GCTGTAGGGCCAATGGCGATCATTGCCAGGCTGACACGGTCGAGCATGGT 587
||..|.|||||..|||||||.||.||.||||||||.||.||.||||||.|
BL03771___dpp 538 GCGATGGGGCCGCTGGCGATTATCGCAAGGCTGACCCGATCCAGCATGAT 587
BSNT_02182___ 588 CGAAGTTCTGACACAGGATTATATCCGCACAGCAAAAGCAAAAGGGCTTT 637
||||||.|||||.||||||||||||||.|||||....||.||||||||||
BL03771___dpp 588 CGAAGTGCTGACGCAGGATTATATCCGAACAGCCCGGGCTAAAGGGCTTT 637
BSNT_02182___ 638 CTCCGTTCAAAATTATCGTAAAACACGCACTCAGAAATGCACTCATGCCC 687
|.||.||.||||||.||.|.||.|||||.||.|.|||.||.||.|||||.
BL03771___dpp 638 CCCCTTTTAAAATTGTCATGAAGCACGCCCTGAAAAACGCCCTTATGCCT 687
BSNT_02182___ 688 GTCATTACCGTCCTGGGCACACTCGTCGCCAGC-ATCTTAACAGGAAGCT 736
||..|.||..|.||.||.||.||...|| |.|| ||.|||||.||.||||
BL03771___dpp 688 GTTGTAACGATTCTCGGGACGCTTACCG-CTGCGATTTTAACGGGGAGCT 736
BSNT_02182___ 737 TTGTCATTGAAAAAATCTTTGCCATTCCGGGAATGGGAAAATATTTTGTT 786
|.|||||.||||||||||||||.||||||||.||||||||||||||||||
BL03771___dpp 737 TCGTCATCGAAAAAATCTTTGCGATTCCGGGCATGGGAAAATATTTTGTT 786
BSNT_02182___ 787 GAAAGCATTAA-TCAGCGGGACTACCCCGTGATTATGGGAACGACCGTTT 835
||||||||.|| || .||.||.|||||||||||||||||.||.|||||||
BL03771___dpp 787 GAAAGCATCAACTC-CCGCGATTACCCCGTGATTATGGGCACCACCGTTT 835
BSNT_02182___ 836 TTTACAGCGTCATTCTGATTATCATGCTGTTTTTGGTCGATTTGGCCTAC 885
||||||||.||||.||.||.||||||.|||||.|.||.||..||||||||
BL03771___dpp 836 TTTACAGCATCATCCTCATCATCATGTTGTTTCTCGTTGACATGGCCTAC 885
BSNT_02182___ 886 GGTCTCTTAGACCCGCGCATTAAACTGCATAAGAAAGGGTGA 927
||..|..|.||.|||||.||||||||||||||||||||||||
BL03771___dpp 886 GGAATACTGGATCCGCGTATTAAACTGCATAAGAAAGGGTGA 927
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