Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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DNA alignment: BSNT_02183 and BL03770

See Amino acid alignment / Visit BSNT_02183 in genome browser / Return to Orthologue table
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# Program: needle
# Rundate: Mon  8 Mar 2010 06:23:41
# Commandline: needle
#    -asequence dna-align/BSNT_02183___dppC.1.5803.seq
#    -bsequence dna-align/BL03770___dppC.2.5803.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile dna-align/BSNT_02183___dppC-BL03770___dppC.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_02183___dppC-BL03770___dppC.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_02183___dppC
# 2: BL03770___dppC
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 998
# Identity:     693/998 (69.4%)
# Similarity:   693/998 (69.4%)
# Gaps:          73/998 ( 7.3%)
# Score: 2397.5
# 
#
#=======================================

BSNT_02183___      1 GTGAATCTCCCTGTACAAACGGATGAAC--GCCAGCCAGAACAGCACAA-     47
                                           ||||.|  .||||.|.|.||||.|.|| 
BL03770___dpp      1 ----------------------ATGAGCCTTCCAGTCCGCACAGAAAAAG     28

BSNT_02183___     48 --------TCAGG--------TGCCTGATGAGTGGTTTGTCTC-------     74
                             |||||        |.||||.|||.|||||||.|.|       
BL03770___dpp     29 AAGCGTCTTCAGGCAGTGATATCCCTGTTGAATGGTTTGCCCCGCTGAAA     78

BSNT_02183___     75 --GAATCAGGAAAAAAATCGGGAAGCCGATTCGGTCAAGCGGCCGAGTTT    122
                       |||.||||   |..|.||.|||.|||  |||  |||  ||||||||.|
BL03770___dpp     79 CAGAAGCAGG---ATGAGCGTGAATCCG--TCG--CAA--GGCCGAGTCT    119

BSNT_02183___    123 GTCATACACGCAGGATGCCTGGAGGAGGCTGAAAAAAAATAAATTAGCGA    172
                     ||||||...||||.|.||||||.|||...|.|..|||||.||..|.||||
BL03770___dpp    120 GTCATATTGGCAGAACGCCTGGCGGATTTTAAGGAAAAACAAGCTGGCGA    169

BSNT_02183___    173 TGGCCGGA-----CTCTTTATTCTTTTATTTCTTTTTGTCATGACAGTTA    217
                     ||||.|||     |...|||.||     ||.||.||..|||||.|.|.|.
BL03770___dpp    170 TGGCGGGATTGGGCGTGTTAATC-----TTCCTGTTCTTCATGGCTGCTC    214

BSNT_02183___    218 TCGGGCCCTTTTTATCGCCCCATAGTGTCGTACGC--CAATCGCTGACAG    265
                     ||||.||..||.|.||.||.||.||.|||  ||.|  ||..||||..|.|
BL03770___dpp    215 TCGGACCGGTTCTTTCTCCGCACAGCGTC--ACCCAGCAGACGCTATCCG    262

BSNT_02183___    266 AACAAAATCTTCCGCCCTCAGCCGATCATTGGTTCGGCACCGATGAACTC    315
                     |.|||||.||.||.||.||..|.||.|||||||||||.||.|||||.|||
BL03770___dpp    263 AGCAAAACCTGCCTCCGTCGACGGAGCATTGGTTCGGAACTGATGAGCTC    312

BSNT_02183___    316 GGCCGGGATGTGTTTACCCGGACATGGTATGGCGCGAGAATCTCGTTGTT    365
                     ||.||.|||||||||||..|.||.|||||.||.|||||.||.||..||||
BL03770___dpp    313 GGACGCGATGTGTTTACAAGAACGTGGTACGGAGCGAGGATTTCTCTGTT    362

BSNT_02183___    366 TGTCGGCGTGATGGCAGCACTGATTGATTTTTTGATCGGTGTCATTTACG    415
                     ||||||.||.|||||.||..||||.||||||...|||||.|||||.||||
BL03770___dpp    363 TGTCGGTGTTATGGCGGCTTTGATCGATTTTGCAATCGGCGTCATCTACG    412

BSNT_02183___    416 GAGGCGTTGCCGGCTATAAAGGCGGCAGGATTGACAGCATTATGATGCGG    465
                     |.|||.|.|||||||||||||||||||..|..|||..|...|||||||||
BL03770___dpp    413 GCGGCATCGCCGGCTATAAAGGCGGCAAAACAGACCACGCCATGATGCGG    462

BSNT_02183___    466 ATTATCGAAGTGCTGTACGGACTGCCATACCTGCTTGTTGTCATTTTGCT    515
                     .|.||||||||||||.||||||||||.||..|..|.||.||||||.|.||
BL03770___dpp    463 GTCATCGAAGTGCTGCACGGACTGCCTTATTTATTGGTCGTCATTCTTCT    512

BSNT_02183___    516 GATGGTGCTTATGGGGCCGGGACTGGGCACTATTATTGTGGCGCTGACTG    565
                     .|||||..|.||||||||.|||||.||.||.||..|.||.||||||||||
BL03770___dpp    513 CATGGTCATGATGGGGCCTGGACTCGGGACGATCCTCGTCGCGCTGACTG    562

BSNT_02183___    566 TGACCGGATGGGTCGGCATGGCGAGAATTGTAAGAGGCCAGGTGCTTCAG    615
                     |.|||||.|||||||||||||||.|.||.||.||.||.|||||..|..||
BL03770___dpp    563 TCACCGGCTGGGTCGGCATGGCGCGGATCGTCAGGGGGCAGGTTTTGAAG    612

BSNT_02183___    616 ATTAAAAATTATGAATATGTACTCGCCTCGAAAACCTTTGGCGCGAAAAC    665
                     .|.||..||.||||..||||.|||||.||.||||||||.||.||||||||
BL03770___dpp    613 GTGAAGCATGATGAGCATGTTCTCGCATCCAAAACCTTCGGAGCGAAAAC    662

BSNT_02183___    666 CTTTCGCATCATCCGGAAGAATTTGCTGCCGAATACTATGGGAGCGATCA    715
                     ..|..|.||||||.||..||||.||||.||.||.|..|||||||||||||
BL03770___dpp    663 GGTAAGGATCATCAGGCGGAATCTGCTTCCTAACATGATGGGAGCGATCA    712

BSNT_02183___    716 TCGTACAAATGACATTAACCGTACCTGCCGCCATATTCGCAGAATCATTT    765
                     ||||.||.|||||.||.||.||.||..|.|||||.||.||.||..|||||
BL03770___dpp    713 TCGTCCAGATGACCTTGACGGTGCCGTCGGCCATTTTTGCCGAGGCATTT    762

BSNT_02183___    766 TTAAGCTTTCTCGGCCTCGGCATACAGGCTCCGTTTGCAAGTTGGGGCGT    815
                     .|.||.||.|||||..|.|||||.||.||.||||||||.||.|||||.||
BL03770___dpp    763 CTCAGTTTCCTCGGTTTGGGCATTCAAGCCCCGTTTGCGAGCTGGGGTGT    812

BSNT_02183___    816 GATGGCGAATGACGGCCTGCCCACGATTTTATCTGGGCATTGGTGGCGCC    865
                     .||||||||.||||||||.||...|||.||.||.||.||.||||||||.|
BL03770___dpp    813 CATGGCGAACGACGGCCTTCCGGTGATCTTGTCGGGACACTGGTGGCGGC    862

BSNT_02183___    866 TGTTTTTTCCGGCCTTTTTCATATCTCTGACGATGTACGCGTTTAATGTG    915
                     ||||||||||.||.||.||.||.||..|.||.||||.|||.||||||||.
BL03770___dpp    863 TGTTTTTTCCCGCTTTCTTTATTTCATTAACTATGTTCGCCTTTAATGTT    912

BSNT_02183___    916 CTGGGGGACGGATTGCAGGATGCGCTTGACCCTAAGCTGAGGAGGTAG    963
                     .|.||.||||||.|||||||||||.|.||.||.||||||||||||||.
BL03770___dpp    913 GTTGGAGACGGACTGCAGGATGCGTTAGATCCGAAGCTGAGGAGGTAA    960


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