Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_02183 and BL03770
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:23:41
# Commandline: needle
# -asequence dna-align/BSNT_02183___dppC.1.5803.seq
# -bsequence dna-align/BL03770___dppC.2.5803.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_02183___dppC-BL03770___dppC.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_02183___dppC-BL03770___dppC.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_02183___dppC
# 2: BL03770___dppC
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 998
# Identity: 693/998 (69.4%)
# Similarity: 693/998 (69.4%)
# Gaps: 73/998 ( 7.3%)
# Score: 2397.5
#
#
#=======================================
BSNT_02183___ 1 GTGAATCTCCCTGTACAAACGGATGAAC--GCCAGCCAGAACAGCACAA- 47
||||.| .||||.|.|.||||.|.||
BL03770___dpp 1 ----------------------ATGAGCCTTCCAGTCCGCACAGAAAAAG 28
BSNT_02183___ 48 --------TCAGG--------TGCCTGATGAGTGGTTTGTCTC------- 74
||||| |.||||.|||.|||||||.|.|
BL03770___dpp 29 AAGCGTCTTCAGGCAGTGATATCCCTGTTGAATGGTTTGCCCCGCTGAAA 78
BSNT_02183___ 75 --GAATCAGGAAAAAAATCGGGAAGCCGATTCGGTCAAGCGGCCGAGTTT 122
|||.|||| |..|.||.|||.||| ||| ||| ||||||||.|
BL03770___dpp 79 CAGAAGCAGG---ATGAGCGTGAATCCG--TCG--CAA--GGCCGAGTCT 119
BSNT_02183___ 123 GTCATACACGCAGGATGCCTGGAGGAGGCTGAAAAAAAATAAATTAGCGA 172
||||||...||||.|.||||||.|||...|.|..|||||.||..|.||||
BL03770___dpp 120 GTCATATTGGCAGAACGCCTGGCGGATTTTAAGGAAAAACAAGCTGGCGA 169
BSNT_02183___ 173 TGGCCGGA-----CTCTTTATTCTTTTATTTCTTTTTGTCATGACAGTTA 217
||||.||| |...|||.|| ||.||.||..|||||.|.|.|.
BL03770___dpp 170 TGGCGGGATTGGGCGTGTTAATC-----TTCCTGTTCTTCATGGCTGCTC 214
BSNT_02183___ 218 TCGGGCCCTTTTTATCGCCCCATAGTGTCGTACGC--CAATCGCTGACAG 265
||||.||..||.|.||.||.||.||.||| ||.| ||..||||..|.|
BL03770___dpp 215 TCGGACCGGTTCTTTCTCCGCACAGCGTC--ACCCAGCAGACGCTATCCG 262
BSNT_02183___ 266 AACAAAATCTTCCGCCCTCAGCCGATCATTGGTTCGGCACCGATGAACTC 315
|.|||||.||.||.||.||..|.||.|||||||||||.||.|||||.|||
BL03770___dpp 263 AGCAAAACCTGCCTCCGTCGACGGAGCATTGGTTCGGAACTGATGAGCTC 312
BSNT_02183___ 316 GGCCGGGATGTGTTTACCCGGACATGGTATGGCGCGAGAATCTCGTTGTT 365
||.||.|||||||||||..|.||.|||||.||.|||||.||.||..||||
BL03770___dpp 313 GGACGCGATGTGTTTACAAGAACGTGGTACGGAGCGAGGATTTCTCTGTT 362
BSNT_02183___ 366 TGTCGGCGTGATGGCAGCACTGATTGATTTTTTGATCGGTGTCATTTACG 415
||||||.||.|||||.||..||||.||||||...|||||.|||||.||||
BL03770___dpp 363 TGTCGGTGTTATGGCGGCTTTGATCGATTTTGCAATCGGCGTCATCTACG 412
BSNT_02183___ 416 GAGGCGTTGCCGGCTATAAAGGCGGCAGGATTGACAGCATTATGATGCGG 465
|.|||.|.|||||||||||||||||||..|..|||..|...|||||||||
BL03770___dpp 413 GCGGCATCGCCGGCTATAAAGGCGGCAAAACAGACCACGCCATGATGCGG 462
BSNT_02183___ 466 ATTATCGAAGTGCTGTACGGACTGCCATACCTGCTTGTTGTCATTTTGCT 515
.|.||||||||||||.||||||||||.||..|..|.||.||||||.|.||
BL03770___dpp 463 GTCATCGAAGTGCTGCACGGACTGCCTTATTTATTGGTCGTCATTCTTCT 512
BSNT_02183___ 516 GATGGTGCTTATGGGGCCGGGACTGGGCACTATTATTGTGGCGCTGACTG 565
.|||||..|.||||||||.|||||.||.||.||..|.||.||||||||||
BL03770___dpp 513 CATGGTCATGATGGGGCCTGGACTCGGGACGATCCTCGTCGCGCTGACTG 562
BSNT_02183___ 566 TGACCGGATGGGTCGGCATGGCGAGAATTGTAAGAGGCCAGGTGCTTCAG 615
|.|||||.|||||||||||||||.|.||.||.||.||.|||||..|..||
BL03770___dpp 563 TCACCGGCTGGGTCGGCATGGCGCGGATCGTCAGGGGGCAGGTTTTGAAG 612
BSNT_02183___ 616 ATTAAAAATTATGAATATGTACTCGCCTCGAAAACCTTTGGCGCGAAAAC 665
.|.||..||.||||..||||.|||||.||.||||||||.||.||||||||
BL03770___dpp 613 GTGAAGCATGATGAGCATGTTCTCGCATCCAAAACCTTCGGAGCGAAAAC 662
BSNT_02183___ 666 CTTTCGCATCATCCGGAAGAATTTGCTGCCGAATACTATGGGAGCGATCA 715
..|..|.||||||.||..||||.||||.||.||.|..|||||||||||||
BL03770___dpp 663 GGTAAGGATCATCAGGCGGAATCTGCTTCCTAACATGATGGGAGCGATCA 712
BSNT_02183___ 716 TCGTACAAATGACATTAACCGTACCTGCCGCCATATTCGCAGAATCATTT 765
||||.||.|||||.||.||.||.||..|.|||||.||.||.||..|||||
BL03770___dpp 713 TCGTCCAGATGACCTTGACGGTGCCGTCGGCCATTTTTGCCGAGGCATTT 762
BSNT_02183___ 766 TTAAGCTTTCTCGGCCTCGGCATACAGGCTCCGTTTGCAAGTTGGGGCGT 815
.|.||.||.|||||..|.|||||.||.||.||||||||.||.|||||.||
BL03770___dpp 763 CTCAGTTTCCTCGGTTTGGGCATTCAAGCCCCGTTTGCGAGCTGGGGTGT 812
BSNT_02183___ 816 GATGGCGAATGACGGCCTGCCCACGATTTTATCTGGGCATTGGTGGCGCC 865
.||||||||.||||||||.||...|||.||.||.||.||.||||||||.|
BL03770___dpp 813 CATGGCGAACGACGGCCTTCCGGTGATCTTGTCGGGACACTGGTGGCGGC 862
BSNT_02183___ 866 TGTTTTTTCCGGCCTTTTTCATATCTCTGACGATGTACGCGTTTAATGTG 915
||||||||||.||.||.||.||.||..|.||.||||.|||.||||||||.
BL03770___dpp 863 TGTTTTTTCCCGCTTTCTTTATTTCATTAACTATGTTCGCCTTTAATGTT 912
BSNT_02183___ 916 CTGGGGGACGGATTGCAGGATGCGCTTGACCCTAAGCTGAGGAGGTAG 963
.|.||.||||||.|||||||||||.|.||.||.||||||||||||||.
BL03770___dpp 913 GTTGGAGACGGACTGCAGGATGCGTTAGATCCGAAGCTGAGGAGGTAA 960
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