Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_02185 and BL03767
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:23:41
# Commandline: needle
# -asequence dna-align/BSNT_02185___dppE.1.5803.seq
# -bsequence dna-align/BL03767___dppE.2.5803.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_02185___dppE-BL03767___dppE.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_02185___dppE-BL03767___dppE.aln
########################################
#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_02185___dppE
# 2: BL03767___dppE
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 1687
# Identity: 1226/1687 (72.7%)
# Similarity: 1226/1687 (72.7%)
# Gaps: 116/1687 ( 6.9%)
# Score: 4383.0
#
#
#=======================================
BSNT_02185___ 1 ATGAAACGAGTGAAAAAGCTATGGGGCATGGGTCTTGCATTAGGACTTTC 50
.||||||.|||...|.||.|| || |.|||.|
BL03767___dpp 1 ---------ATGAAAAGGCTGACGAGCGTG---------TT--GGCTTCC 30
BSNT_02185___ 51 G--TTTGC---------GCTGATGGGGTGCACAGCAAATGAACA-----G 84
| ||||| ||||.|.||.||.||.||||||||||| |
BL03767___dpp 31 GCATTTGCGGTCATCCTGCTGTTCGGATGTACGGCAAATGAACAGGCGGG 80
BSNT_02185___ 85 GCCGGAAAAGAAGGCAGTCATGATAAG-GCAAAAACCAGC-GGAGAAAAG 132
||.|||||.|||| |.|| ||| |.||.||.|.|| ||||||.||
BL03767___dpp 81 GCAGGAAACGAAG------AAGA-AAGCGAAAGAAACGGCTGGAGAACAG 123
BSNT_02185___ 133 GTGCTGTATG-TAAATAATGAAAATGAACCGACTTCATTCGATCCGCCGA 181
||.||| |.| |.||.||.||||||||||||||.||.||.||||||||||
BL03767___dpp 124 GTTCTG-AGGCTGAACAACGAAAATGAACCGACATCTTTTGATCCGCCGA 172
BSNT_02185___ 182 TCGGCTTTAATAATGTGTCATGGCAGCCGTTAAATAACATCATGGAGGGG 231
||||||||||||||||.|||||||||.||.|.||.||..|.|||||.||.
BL03767___dpp 173 TCGGCTTTAATAATGTCTCATGGCAGGCGCTGAACAATCTGATGGAAGGT 222
BSNT_02185___ 232 CTGACGCGTCTTGGCGAAGATCATGAGCCCGAGCCGGCAATGGCGGAGAA 281
.||||..|.|||||||.|||.|||||||||||..||||....||.||.||
BL03767___dpp 223 TTGACAAGACTTGGCGCAGACCATGAGCCCGAAGCGGCGTCCGCCGAAAA 272
BSNT_02185___ 282 ATGGTCTGTTTCGAAAGATAATAAAACTTACACATTTACGATTCGGGAAA 331
.|||....||||..|.||....||.||.||.||.|||||.||.||.||..
BL03767___dpp 273 GTGGAACATTTCCGACGACGGGAAGACATATACTTTTACAATCCGTGATG 322
BSNT_02185___ 332 ATGCGAAATGGACAAACGGAGATCCTGTAACAGCCGGAGACTTCGAATAC 381
||||.||||||.||||||||||.|||.||||.|||||.||.||.|||||.
BL03767___dpp 323 ATGCCAAATGGTCAAACGGAGACCCTTTAACCGCCGGGGATTTTGAATAT 372
BSNT_02185___ 382 GCGTGGAAGCGGATGCTTGATCCGAAAAAAGGCGCTTCATCGGCATTCCT 431
|||||||||||..||||.||||||||||..|||.|.||..|.||.||..|
BL03767___dpp 373 GCGTGGAAGCGTCTGCTCGATCCGAAAACGGGCTCCTCTGCCGCGTTTTT 422
BSNT_02185___ 432 AGGTTATTTTATTGAAGGCGGCGAAGCATATAACAGCGGGAAAGGGAAAA 481
|||.||.|||||.||||||||.||.||.|.|||||||||.|||||...||
BL03767___dpp 423 AGGCTACTTTATCGAAGGCGGTGAGGCCTTTAACAGCGGAAAAGGTTCAA 472
BSNT_02185___ 482 AAGACGATGTGAAGGTGACGGCAAA-----GGATGATCGAACCCTTGAAG 526
||||.|||||.||.|| |||| ||||||....||.|||.|.|
BL03767___dpp 473 AAGATGATGTCAAAGT-----CAAAGCGGTGGATGAAAAGACGCTTAAGG 517
BSNT_02185___ 527 TTACACTGGAAGCACCGCAAAAATATTTTCTGAGCGTTGTGTCCAATCCT 576
|.||.||.|||...|||||..|.|..|||.|.|||.||||..|||||||.
BL03767___dpp 518 TGACGCTTGAAAGTCCGCAGCAGTCGTTTTTAAGCATTGTAGCCAATCCG 567
BSNT_02185___ 577 GCGTATTTTCCGGTAAAT--GAAAAGGTCGATAAAGACAATCCGAAGTGG 624
||.|.|||.|||||...| ||||| |||...|||||||||||||.|||
BL03767___dpp 568 GCCTTTTTCCCGGTTCCTCAGAAAA--TCGCCGAAGACAATCCGAAATGG 615
BSNT_02185___ 625 TTTGCTGAGGCGGATACATTTGTCGGAAACGGCCCGTTTAAGCTGACGGA 674
..||..||.||.|..|||||.|||||.|||||.||||||||||||.|.||
BL03767___dpp 616 CATGAAGAAGCAGCCACATTCGTCGGCAACGGTCCGTTTAAGCTGGCAGA 665
BSNT_02185___ 675 ATGGAAGCATGATGACAGCATCACAATGGAGAAAAGCGACACGTATTGGG 724
|||||||||.|||||.|||.|.||.||||..||.|||||.||||||||||
BL03767___dpp 666 ATGGAAGCACGATGAAAGCTTTACGATGGTAAAGAGCGATACGTATTGGG 715
BSNT_02185___ 725 ATAAAGATACAGTGAAGCTTGATAAGGTGAAATGGGCGATGGTCAGTGAC 774
|....|||||.||||||||||||||.||||.|||||||||||||..||||
BL03767___dpp 716 ACCGGGATACTGTGAAGCTTGATAAAGTGACATGGGCGATGGTCGATGAC 765
BSNT_02185___ 775 AGAAATACAGATTACCAGATGTT----TC-AATCAGGGGAACTTGATACC 819
.|||||||.||.|||||.||||| || ||| |||||||||||.
BL03767___dpp 766 CGAAATACCGACTACCAAATGTTCGAGTCGAAT-----GAACTTGATACG 810
BSNT_02185___ 820 GCTTATGTCCCTGCTGAGCTGAGTGATCAGCTGCT------TGATCAGGA 863
|||||||||||.|||||..||||.||..|||||.| ||||.|||.
BL03767___dpp 811 GCTTATGTCCCGGCTGAAATGAGCGAGAAGCTGATGGGCTCTGATGAGGT 860
BSNT_02185___ 864 TAACGTCAATATTG-TTGACCAGGCGGGTCTCTATTTCTATCGATTTAAT 912
.||.| || ||||.|||||||||||.|||||.||..|.||.|||
BL03767___dpp 861 GAAGG-------TGTTTGATCAGGCGGGTCTTTATTTTTACAGGTTCAAT 903
BSNT_02185___ 913 GTCAACATGGAGCCATTCCAAAATGAAAACATCAGAAAAGCCTTTGCGAT 962
|||||.|..|||||.|||||.||||||||.|||||||||||.||||||||
BL03767___dpp 904 GTCAATAAAGAGCCGTTCCAGAATGAAAAAATCAGAAAAGCGTTTGCGAT 953
BSNT_02185___ 963 GGCTGTGGATCAAGAGGAAATTGTAAAGTACGTCACGAAAAATAATGAAA 1012
|||.||.|||||..|||||||.||..|.||||||||||||||...|||||
BL03767___dpp 954 GGCCGTCGATCAGCAGGAAATCGTCGATTACGTCACGAAAAACGGTGAAA 1003
BSNT_02185___ 1013 AACCGGCGCGCGCCTTTGTATCGCCTGGGTTTACGCA----GCCTGACGG 1058
|||||||.||||..|||||.||.||.|| |..|| |||..||||
BL03767___dpp 1004 AACCGGCACGCGGATTTGTGTCTCCGGG----AATCAAAGGGCCGAACGG 1049
BSNT_02185___ 1059 CAAAGATTTCCGTGAAGCAGGCGGAGACTTGATCAAGCCTAACG--AAAG 1106
|||.|||||.||.||.|.||||||.||.|||.||||...||||| .|.|
BL03767___dpp 1050 CAAGGATTTTCGCGAGGAAGGCGGCGATTTGCTCAAATATAACGCCGATG 1099
BSNT_02185___ 1107 CAAAGCGAAGCAGCTGCTAGAAAAGGGCATGAAGGAAGAAAACTATAATA 1156
|||||||.||||||||.|||||.|||||||||||.||||||||..|.|
BL03767___dpp 1100 --AAGCGAAACAGCTGCTCGAAAAAGGCATGAAGGAGGAAAACTACGAAA 1147
BSNT_02185___ 1157 AGCTTCCTGCGATCACGCTT-ACTTACAGCACAAAGCCGGAGCATAAAAA 1205
||||.||.||..|.|| ||| ||.|||||||||||.||||||||||||||
BL03767___dpp 1148 AGCTGCCCGCCGTTAC-CTTGACATACAGCACAAAACCGGAGCATAAAAA 1196
BSNT_02185___ 1206 GATTGCCGAAGCTATTCAGCAAAAATTGAAAAATAGCCTTGGAGTCGATG 1255
.||.||.|||||..|||||||||||.||||||.||..||.||.|||||||
BL03767___dpp 1197 AATGGCGGAAGCGGTTCAGCAAAAACTGAAAAGTACGCTCGGCGTCGATG 1246
BSNT_02185___ 1256 TAAAGCTGGCCAATATGGAATGGAACGTATTTTTAGAGGATCAAAAAGCG 1305
|.|||||.||||||||||||||||||..|||..|.||.||.||.||.|||
BL03767___dpp 1247 TGAAGCTCGCCAATATGGAATGGAACACATTCCTTGAAGAACAGAAGGCG 1296
BSNT_02185___ 1306 CTGAAATTCCAATTCTCTCAAAGCTCATTTTTGCCTGATTATGCAGACCC 1355
||.||.|||||.||.||.||||||||.|||.||.||||||||||.||.||
BL03767___dpp 1297 CTCAAGTTCCAGTTTTCCCAAAGCTCTTTTCTGGCTGATTATGCGGATCC 1346
BSNT_02185___ 1356 TATCAGTTTTCTGGAAGCCTTTCAAACGGGTAATTCGATGAACCGCACAG 1405
|||||..||.||||||..|||||||||||||||..|.||||||.|.||.|
BL03767___dpp 1347 TATCAACTTCCTGGAAAGCTTTCAAACGGGTAACGCAATGAACAGAACCG 1396
BSNT_02185___ 1406 GCTGGGCCAATAAAGAATACGATCAGCTGATCAAACAGGCGAAAAATGAA 1455
||||||.||||..|||.||.||..||||||||||...|||||||||||||
BL03767___dpp 1397 GCTGGGGCAATTCAGAGTATGACGAGCTGATCAAGGCGGCGAAAAATGAA 1446
BSNT_02185___ 1456 GCCGATGAAAAAACACGGTTCTCT---CTTATGCATCAAGCTGAAGAGCT 1502
||.||||||.|||..|| |.|| ||..|||||||.||||||||.||
BL03767___dpp 1447 GCTGATGAAGAAAAGCG---CACTGAGCTGCTGCATCAGGCTGAAGAACT 1493
BSNT_02185___ 1503 GCTCATCAATGAAG---CGCCGATCATCCCGGTTTATTTTTATAATCAGG 1549
|||..| ||||| .|||||||||.|||.|..|.||.||||||||.|
BL03767___dpp 1494 GCTGTT---TGAAGGGATGCCGATCATACCGATCCACTTCTATAATCAAG 1540
BSNT_02185___ 1550 TTCACCTGCAAAATGAACAAGTAAAGGGAATTGTCCGTCACCCTGTCGGC 1599
|.||..||.||||.||..|.||.||.||.||.||||||||.|||||||||
BL03767___dpp 1541 TCCATTTGGAAAAGGAGAATGTGAAAGGCATCGTCCGTCATCCTGTCGGC 1590
BSNT_02185___ 1600 TATATCGATTTAAAATGGGCAGATAAAAAC----TGA 1632
||.||.||..|.||||||||.|| |||||| |||
BL03767___dpp 1591 TACATTGAACTGAAATGGGCCGA-AAAAACGTCATGA 1626
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