Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_02201 and BL03755
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:23:43
# Commandline: needle
# -asequence dna-align/BSNT_02201___ykkC.1.5803.seq
# -bsequence dna-align/BL03755___ykkC.2.5803.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_02201___ykkC-BL03755___ykkC.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_02201___ykkC-BL03755___ykkC.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_02201___ykkC
# 2: BL03755___ykkC
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 363
# Identity: 232/363 (63.9%)
# Similarity: 232/363 (63.9%)
# Gaps: 57/363 (15.7%)
# Score: 683.5
#
#
#=======================================
BSNT_02201___ 1 ATGAAATGGGG-ATTGGTCGTGCTTGCCGC--TGTTTTCGAGGTTGTTTG 47
||||.|||||| |.| |||.|.|||||.|| ||||| ||..|||..||
BL03755___ykk 1 ATGAGATGGGGCAGT-GTCATACTTGCAGCCTTGTTT--GAAATTGGCTG 47
BSNT_02201___ 48 GGTGAT-AGGCTTAAAGCACGCTGACTCAGC-CTTAACATGGAGCGGCAC 95
|||.|| .||||.||| |||||.||.||.|| |||.| |||||.|.||||
BL03755___ykk 48 GGTCATGGGGCTGAAA-CACGCCGATTCGGCACTTGA-ATGGATCTGCAC 95
BSNT_02201___ 96 TGCCATCGGCATCATATTCAGTTTTTATCTTCTAATAAAGGCGACTCACA 145
.||...||.|.||.|..|.||.||.|||.|.||..|.||.|||....|.|
BL03755___ykk 96 GGCGGCCGCCGTCGTGATGAGCTTCTATATACTGGTGAAAGCGGGGGAGA 145
BSNT_02201___ 146 GTCTGCCTGTTGGTACCGTGTATGCCGTCTTTAGCGGGCTCGGCACAGCG 195
..|||||.||.||.||||||||||||||.||||.|||.|||||.||.|||
BL03755___ykk 146 AGCTGCCGGTCGGAACCGTGTATGCCGTATTTACCGGTCTCGGGACGGCG 195
BSNT_02201___ 196 GGAACAGTACTTAGTGAAATCGTTCTGTTTCATGAACCGG----TTGGAT 241
|||||.||..|..|.|||||||...||||..||||.|||| | ||
BL03755___ykk 196 GGAACGGTCGTCTGCGAAATCGCCTTGTTCAATGAGCCGGCAAAT---AT 242
BSNT_02201___ 242 GGCCGAAGCTATTGTTAATTGGCGTGCTCTTAATCGGT------------ 279
.||| ||||| ||||| |.||||||
BL03755___ykk 243 CGCC-AAGCT--------------TGCTC-TGATCGGTGTTTTGCTATGC 276
BSNT_02201___ 280 ---GTAATCGGGTTGAAGCTTGTGACACAGGATGAGACAGAGGAAAAAGG 326
||.|||||.|||||||||||.|||.|.||.|| ||||..||
BL03755___ykk 277 GGCGTGATCGGTTTGAAGCTTGTAACAAATGAAGA-------GAAAGGGG 319
BSNT_02201___ 327 AGGCGAGGCATAA 339
|||| |.|||||
BL03755___ykk 320 AGGC--GTCATAA 330
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