Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_02204 and BL03753
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:23:43
# Commandline: needle
# -asequence dna-align/BSNT_02204___purU.1.5803.seq
# -bsequence dna-align/BL03753___purU.2.5803.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_02204___purU-BL03753___purU.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_02204___purU-BL03753___purU.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_02204___purU
# 2: BL03753___purU
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 927
# Identity: 706/927 (76.2%)
# Similarity: 706/927 (76.2%)
# Gaps: 48/927 ( 5.2%)
# Score: 2652.5
#
#
#=======================================
BSNT_02204___ 1 ATGAAATCATATATGACTCAGCGGTTGGA-CG-AATACCGTGACGGA--- 45
|||||..|||||||||..||||.||| | || ||||.| .|||
BL03753___pur 1 ATGAACGCATATATGAAACAGCAGTT--ATCGCAATATC----AGGAAAT 44
BSNT_02204___ 46 -AATGAGGATAAAGGGCGGCTCTTGGTCAGCTGCCCCGATCAGCCGGGTA 94
|||.|.|||||.|..||.||..||||||||||.||.||||||||.||.|
BL03753___pur 45 CAATAACGATAAGGCCCGCCTTCTGGTCAGCTGTCCGGATCAGCCTGGAA 94
BSNT_02204___ 95 TCGTCTCTGCAGTTTCTGCGTTTTTATTTGAACACGATGCCAATATTATA 144
|||||.|.||.||||||.|.|||||||||||..|||.|||.||||||||.
BL03753___pur 95 TCGTCGCCGCCGTTTCTTCATTTTTATTTGAGAACGGTGCGAATATTATT 144
BSNT_02204___ 145 GAATCAAATCAATATACGACAGACCCTGAAGGCGGCCGGTTCTTCCTGAG 194
|||||.||.||.||||||||||||||||||||.|||||||||||.|||.|
BL03753___pur 145 GAATCGAACCAGTATACGACAGACCCTGAAGGAGGCCGGTTCTTTCTGCG 194
BSNT_02204___ 195 AATCGAATTCGACTGCGCG-----GGCATTCGTGAGAAAAAAGCATCTCT 239
.||.||.||.|| .| |||||.||.||.||.|..|.|
BL03753___pur 195 GATTGAGTTTGA-----AGTTCAAGGCATCCGCGAAAAGATCGAA----- 234
BSNT_02204___ 240 TCAG------GCGGCGTTTGCCTCTGTAGCGGAAAAATTCGACATGACAT 283
||| |||||.||.||||||||.|||||....|||.|.|||||.|
BL03753___pur 235 -CAGATGAAAGCGGCATTCGCCTCTGTGGCGGAGTCCTTCCAAATGACGT 283
BSNT_02204___ 284 GGAGCTTAACTTTGGCAAGTGAATTGAAGCGTGTCGCCATTTTTGTTTCA 333
|||||.|.|.||||||.||.|||.||||.||.|||||.||.||.||||||
BL03753___pur 284 GGAGCATGAATTTGGCGAGCGAACTGAAACGCGTCGCTATCTTCGTTTCA 333
BSNT_02204___ 334 AAGGAGCTTCATTGCCTGCATGAGCTGATTTGGGAATGGCAAACCGGCAA 383
||.||||||||.|||||||||||.|||.|.|||||||||||.|.||||||
BL03753___pur 334 AAAGAGCTTCACTGCCTGCATGAACTGCTATGGGAATGGCAGAGCGGCAA 383
BSNT_02204___ 384 CCTGATGGCGGAGATCGCTGTTGTCATCAGTAACCATGAGGAAGCGAGAG 433
..|||||||||||||.||.|..||.|||||.||.|||||.||.||.||||
BL03753___pur 384 TTTGATGGCGGAGATTGCAGCGGTTATCAGCAATCATGAAGATGCAAGAG 433
BSNT_02204___ 434 -AGCTGGTTGAGCGCCTGAACATTCCATTCCACTATATGAAAGCGAACAA 482
|.|| |||||...||||||.|||||.||||..||.||||||||||||||
BL03753___pur 434 AAACT-GTTGAATCCCTGAATATTCCGTTCCTTTACATGAAAGCGAACAA 482
BSNT_02204___ 483 AGACA----TCAGAGCGGAAGTCGAAAAGAAGCAGCTTGAACT-GCTGGA 527
||||| ||| ||||||.|||||..|||||| ||||.| |||.||
BL03753___pur 483 AGACATTCGTCA----GGAAGTGGAAAAACAGCAGC-TGAAATGGCTTGA 527
BSNT_02204___ 528 GCAGTA-CGATGTTGATGTCATCGTGCTTGCACGCTATATGCAGATTCTA 576
..|||| || ||..|||||||||||.||.||.||.||||||||||||.||
BL03753___pur 528 AGAGTATCG-TGCGGATGTCATCGTTCTCGCCCGATATATGCAGATTTTA 576
BSNT_02204___ 577 ACTCCTGATTTTGTTTCGGCTCATCCGAATCGCATCATCAATATCCACCA 626
||.|||||||||||.||||||||||||||....|||||.|||||.|||||
BL03753___pur 577 ACGCCTGATTTTGTCTCGGCTCATCCGAACAAAATCATAAATATTCACCA 626
BSNT_02204___ 627 TTCATTTCTGCCTGCTTTTATCGGTGCGAATCCGTACAAACGGGCTTACG 676
.||.||.|||||.|||||||||||.|||||||||||.||||||||.||.|
BL03753___pur 627 CTCCTTCCTGCCGGCTTTTATCGGGGCGAATCCGTATAAACGGGCATATG 676
BSNT_02204___ 677 AGCGCGGCGTGAAACTGATCGGTGCGACATCTCACTATGTGACAAACGAT 726
|..|.|||||.|||||||||||.||.|||||.||.||||||||||||||.
BL03753___pur 677 AAAGAGGCGTTAAACTGATCGGAGCAACATCGCATTATGTGACAAACGAA 726
BSNT_02204___ 727 CTTGATGAAGGACCGATCATTGAACAGGATATTGAGCGTGTGGACCACCG 776
.|.||||||||.||||||||.|||||||||||.||.||.||.||||||.|
BL03753___pur 727 TTGGATGAAGGGCCGATCATCGAACAGGATATCGAACGGGTCGACCACAG 776
BSNT_02204___ 777 CGATAATGCGGAAGCGCTGAAAAACATCGGAAGAACAATTGAGCGCAGCG 826
.||.||||.||||||..|||||||||||||..||||.||||||.|.||||
BL03753___pur 777 AGACAATGTGGAAGCATTGAAAAACATCGGCCGAACGATTGAGAGAAGCG 826
BSNT_02204___ 827 TGCTTGCCCGTGCTGTGAAATGGCATTTGGAAGACCGTGTCATCGTTCAT 876
|..|.||..|.||.||.||||||||.|||||||||||..|.|||||.|||
BL03753___pur 827 TTTTGGCAAGAGCGGTCAAATGGCACTTGGAAGACCGGATTATCGTGCAT 876
BSNT_02204___ 877 GAAAATAAAACAATCGTCTTTAACTAG 903
|.|||.||.||.|||||||||||.||.
BL03753___pur 877 GGAAACAAGACGATCGTCTTTAATTAA 903
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