Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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DNA alignment: BSNT_02220 and BL03740

See Amino acid alignment / Visit BSNT_02220 in genome browser / Return to Orthologue table
########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:23:44
# Commandline: needle
#    -asequence dna-align/BSNT_02220___ispA.1.5803.seq
#    -bsequence dna-align/BL03740___ispA.2.5803.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile dna-align/BSNT_02220___ispA-BL03740___ispA.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_02220___ispA-BL03740___ispA.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_02220___ispA
# 2: BL03740___ispA
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 976
# Identity:     697/976 (71.4%)
# Similarity:   697/976 (71.4%)
# Gaps:          38/976 ( 3.9%)
# Score: 2371.0
# 
#
#=======================================

BSNT_02220___      1 ATGAATGGTGAAATCCGCTTGATCCCGTATGTGACGAATGAGC----AGA     46
                         |||  .||||.||.||.||.||.|||||.||   ||| |    ||.
BL03740___isp      1 ----ATG--CAAATGCGATTAATTCCTTATGTCAC---TGA-CACAAAGC     40

BSNT_02220___     47 TCATGGATGTAAACGAGCTTCCTGAGGGCATTAAAGTGATTAAGGCGCCA     96
                     |.|||||.||.||.||.||.||.||.||.||..|.|.|||||||||.||.
BL03740___isp     41 TGATGGACGTGAATGAACTGCCGGAAGGAATCGATGCGATTAAGGCACCG     90

BSNT_02220___     97 GAAATGTGGGCAAAAGGGGTAAAAGGCAAAAATATTAAAGTTGCTGTATT    146
                     ||..|||||.||.||||..|.|||||.|||.||||.|..||.||.||..|
BL03740___isp     91 GAGCTGTGGTCACAAGGTTTTAAAGGAAAAGATATCACTGTCGCAGTGCT    140

BSNT_02220___    147 AGACACGGGCTGCGACACAAGCCACCCTGATTTAAAAAATCAAATCATCG    196
                     .||.||.|||||.|||.|||.|||.||.|||||.....|.|.||||||||
BL03740___isp    141 TGATACAGGCTGTGACGCAACCCATCCAGATTTGGCGGACCGAATCATCG    190

BSNT_02220___    197 GCGGAAAGAACTTCACGGATGACGACGGCGGCAAGGAAGATGCGATTTC-    245
                     |.||.|..||||||||.|||||.|||..|||.||.|||||| |..|||| 
BL03740___isp    191 GAGGCAGAAACTTCACTGATGATGACAACGGAAAAGAAGAT-CAGTTTCA    239

BSNT_02220___    246 CGACTACAACGGACACGGCACACACGTCGCCGGAACGATTGCAGCTAATG    295
                     .||.||.||.|||||.|||||.||.||.||.||.||||||||.||.||.|
BL03740___isp    240 TGATTATAATGGACATGGCACCCATGTGGCGGGTACGATTGCCGCAAACG    289

BSNT_02220___    296 ATTCAAACGGAGGCATTGCCGGAGTCGCGCCTGAGGCAAGCCTATTGATT    345
                     ||..|||||||||||||.||||.||.||.||.||.||.|.||||||.||.
BL03740___isp    290 ATCAAAACGGAGGCATTTCCGGCGTAGCACCCGAAGCGAACCTATTAATC    339

BSNT_02220___    346 GTGAAGGTTCTTGGCGGCGAGAATGGCAGCGGACAATACGAATGGATAAT    395
                     ||.|||||.||.|||||.||..|.||||||||..|.||.||||||||.||
BL03740___isp    340 GTCAAGGTGCTCGGCGGTGAAGACGGCAGCGGGGATTATGAATGGATCAT    389

BSNT_02220___    396 TAACGGCATCAACTACGCGGTGGAACAGAAAGTCGACATCATCTCAATGT    445
                     .|||||.|||||||||||.||.||.||.||||.||||||.||.|||||||
BL03740___isp    390 CAACGGGATCAACTACGCCGTTGAGCAAAAAGCCGACATTATTTCAATGT    439

BSNT_02220___    446 CCCTTGGAGGGCCAAGCGATGTGCCAGAGCTGGAAGAAGCAGTGAAAAAC    495
                     |.||.||.||.||...|||.||.||.|||.||.|.|||||.||||.||||
BL03740___isp    440 CGCTCGGCGGTCCTGCCGACGTTCCGGAGTTGAAGGAAGCGGTGACAAAC    489

BSNT_02220___    496 GCAGTCAAAAACGGAGTGCTTGTCGTTTGTGCAGCGGGAAATGAAGGTGA    545
                     ||.||.||.|.|||||||||.|||||.||.||.||.|||||.|||||.||
BL03740___isp    490 GCCGTGAAGAGCGGAGTGCTCGTCGTCTGCGCCGCAGGAAACGAAGGCGA    539

BSNT_02220___    546 CGGCGACGAACGCACAGAAGAGCTTTCCTACCCCGCAGCTTATAATGAAG    595
                     ||||.|.||.||.|||||.|||...||.|||||.||.||.||.||.||||
BL03740___isp    540 CGGCAATGACCGTACAGAGGAGTACTCATACCCTGCTGCATACAACGAAG    589

BSNT_02220___    596 TGATTGCAGTTGGATCTGTTTCTGTAGCGCGAGAATTATCAGAATTTTCT    645
                     |.||.||.||.|||||.||.||..|..||||.||.|..||.||||||||.
BL03740___isp    590 TCATCGCCGTCGGATCCGTGTCATTGACGCGTGAGTCTTCCGAATTTTCA    639

BSNT_02220___    646 AACGCGAATAAAGAGATTGACCTTGTGGCACCAGGAGAAAACATCTTATC    695
                     ||.|||||.|||||.|||||||||||.|||||.||||||.|.|||.|.||
BL03740___isp    640 AATGCGAACAAAGAAATTGACCTTGTTGCACCTGGAGAAGAAATCCTCTC    689

BSNT_02220___    696 CACCCTTCCCAACAAGAAGTACGGTAAGCTGACCGGCACTTCAATGGCTG    745
                     .||..|.|||.||.|..|.|||||.||||||||.||.||.||.||||||.
BL03740___isp    690 TACATTGCCCGACCATCAATACGGAAAGCTGACGGGAACATCGATGGCTA    739

BSNT_02220___    746 CCCCTCATGTCAGCGGTGCGCTTGCTTTAATCAA--AAGCTATGAAGAAG    793
                     |.||.||.||||||||.|||||.|||.|.|||||  .|||  ||||||||
BL03740___isp    740 CACCGCACGTCAGCGGCGCGCTCGCTCTCATCAAGTCAGC--TGAAGAAG    787

BSNT_02220___    794 AATCATTTCAAAGAAAGCTTTCTGAATCTGAGGTTTTCGCACAGCTAATC    843
                     |..|.|||.||.|.||.||..|.|||.|.||..|.|..||.|||.|||||
BL03740___isp    788 AGGCGTTTAAACGGAAACTGACAGAACCCGAACTGTATGCTCAGTTAATC    837

BSNT_02220___    844 CGCAGGACACTTCCTCTTGA-TATTGCAAAAACGCTGGCAGGCAATGGAT    892
                     |||.|.||.||||||||||| ||.| |||||.|||||...|||||.||||
BL03740___isp    838 CGCCGCACCCTTCCTCTTGATTACT-CAAAAGCGCTGATCGGCAACGGAT    886

BSNT_02220___    893 TCCTGTATTTAACAGCTCCTGATGAGCTCGCAGAAAAAGCAG----AGCA    938
                     ||.|.|||||..||||.||.||.|..||.||.||||||||.|    ||||
BL03740___isp    887 TCTTATATTTGTCAGCGCCGGAGGTACTGGCGGAAAAAGCCGGCGAAGCA    936

BSNT_02220___    939 A----TCACATTTGTTGACCCTATAA    960
                     |    ||   |||     ||||.|||
BL03740___isp    937 AAACTTC---TTT-----CCCTTTAA    954


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Natto Genome Project Bacillus subtilis subsp. natto str. BEST195

DNA alignment: BSNT_02220 and BL03740

Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
