Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_02218 and BL03738
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:23:44
# Commandline: needle
# -asequence dna-align/BSNT_02218___metE.1.5803.seq
# -bsequence dna-align/BL03738___metE.2.5803.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_02218___metE-BL03738___metE.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_02218___metE-BL03738___metE.aln
########################################
#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_02218___metE
# 2: BL03738___metE
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 2358
# Identity: 1732/2358 (73.5%)
# Similarity: 1732/2358 (73.5%)
# Gaps: 138/2358 ( 5.9%)
# Score: 6107.0
#
#
#=======================================
BSNT_02218___ 1 ATGACAACCATCAAAAC-ATCGAATTTAGGATTTCCGAGAATCGGACTGA 49
|||||.|...|.||||| |.| |..||.||.|||||.||||||||..|||
BL03738___met 1 ATGACTAATGTAAAAACGAGC-AGCTTGGGCTTTCCAAGAATCGGCTTGA 49
BSNT_02218___ 50 ACCGGGAATGGAAAAAAGCACTTGAAGCGTATTGGAAAGGCAGTACTGAT 99
||.|.||||||||||||.|.|||||.||.|||||||||||.|..||.||.
BL03738___met 50 ACAGAGAATGGAAAAAATCGCTTGAGGCTTATTGGAAAGGAAACACGGAC 99
BSNT_02218___ 100 AAAGATACGTTTTTGAAGCAAATCGACGAACTATTTTTATCCGCAGTAAA 149
...||.||.||||||||..||||.||.||||.|||||||.|.||..|..|
BL03738___met 100 CGCGAGACCTTTTTGAAAGAAATGGATGAACAATTTTTAGCAGCGCTCCA 149
BSNT_02218___ 150 AACACAAATTGACCAGCAGATTGATGTTGTGCCTGTTTCTGATTTCACAC 199
.||.||..||||.|||||.||.|||.|..|.||.|||||.||.||.|||.
BL03738___met 150 GACTCAGCTTGATCAGCAAATCGATATCATACCGGTTTCCGACTTTACAA 199
BSNT_02218___ 200 AGTATGACCATGTACTCGACACAGCAGTCAGCTTCAACTGGATCCCGAAA 249
.|||.||||||||.||.|||||.||.||.|..|||||||||||.||..|.
BL03738___met 200 TGTACGACCATGTTCTTGACACGGCGGTGATGTTCAACTGGATTCCAGAT 249
BSNT_02218___ 250 CGTTTCAGACATTTGACTGA--CGCTACCGATACATACTTCGCTATCGCC 297
||.||||...||.|.|..|| ||.|| |||||.||.|||||.||.||.
BL03738___met 250 CGATTCAAGGATATAAACGATCCGTTA--GATACTTATTTCGCAATGGCG 297
BSNT_02218___ 298 CGCGGAATCAAAGACGCCGTATCTAGTGAAATGACAAAATGGTTTAATAC 347
.|.||.|..|||||.||.|||||.||||||||||||||||||||||||||
BL03738___met 298 AGAGGCACGAAAGATGCTGTATCGAGTGAAATGACAAAATGGTTTAATAC 347
BSNT_02218___ 348 AAATTACCATTACATCGTTCCGGAATATGACGA--GAGCATTGAGTTCCG 395
|||.||||||||.||.||.||.||||||||..| |.||| .|.|.|||
BL03738___met 348 AAACTACCATTATATTGTGCCTGAATATGAAAAAGGTGCA--CAATACCG 395
BSNT_02218___ 396 TCTGACAAGAAACAAACAACTCGAAGATTATCGCC--GGATCAAA----- 438
..||||.||||||||||..||..||||||| || .||.||||
BL03738___met 396 CGTGACGAGAAACAAACCGCTTCAAGATTA---CCAAAGAGCAAAAGCAG 442
BSNT_02218___ 439 CA---GGAATACGGTGTGGAAACAAAGCCTGTGATTGTCGGCCCTTATAC 485
|| ||||.| |||||.|||||.||.||..||||||.|||.||
BL03738___met 443 CATTGGGAACA-------GAAACGAAGCCCGTCATACTCGGCCTTTACAC 485
BSNT_02218___ 486 GTTCGTTACGCTTGCTAAAGGCTATGAACCATCTGAAGCA----AAAGCG 531
.|||||..|.|||||.|||||||||||||.| .||.| ||||..
BL03738___met 486 TTTCGTAGCCCTTGCAAAAGGCTATGAACAA----CAGGATATTAAAGAT 531
BSNT_02218___ 532 AT------CCAAA-AACGCCTTGTGCCATTATATGTACAGCTTTTGAAAG 574
|| ||||| .||.||| |.|||.| |.|||.|||||||||
BL03738___met 532 ATTTATAACCAAATGACACCT-----CTTTACA--TCCAGGTTTTGAAAG 574
BSNT_02218___ 575 AGCTTGAAGAAGAAGGCGTAAAATGGGTTCAAATCGATGAGCCGGCGCTC 624
|||||||..|.||||||||.||||||||.|||||.||.|||||.||.||.
BL03738___met 575 AGCTTGAGCAGGAAGGCGTCAAATGGGTGCAAATTGACGAGCCTGCTCTT 624
BSNT_02218___ 625 GTTACCGCCTCTAGTGAAGATGTCCGCGGC-GCAAAAGAATTATTTGAAA 673
||.||.||.||...||||||.| |.||.|| |..||||||.|.|.|.|.|
BL03738___met 625 GTGACGGCTTCACCTGAAGAAG-CGGCTGCTGTCAAAGAAATCTATCAGA 673
BSNT_02218___ 674 GCATTAC-----AAGTGAGCTTTCATCCTTGAATGTGCTTTTGCAGACGT 718
..||||| |||| ||.|.|.| ||||..|.|||.||||.||.|
BL03738___met 674 CGATTACAGAAGAAGT---CTCTGAAC--TGAACATCCTTCTGCAAACCT 718
BSNT_02218___ 719 ATTTTGATTCTGTTGATGCTTATGAAGAGCTGATCTC-TTACCCGGTTCA 767
|.|||||.||.|||||||||||||||||||||||.|| ||.||.|...||
BL03738___met 719 ACTTTGACTCGGTTGATGCTTATGAAGAGCTGATATCGTTTCCTGTCGCA 768
BSNT_02218___ 768 GGGAATTGGCCTTGATTTCGTTCACGACAAAGGCAGAAACCTGGAACAGC 817
||||||||.||||||||.|||||.||.|||||.|.||||.|.|||||.|
BL03738___met 769 -GGAATTGGTCTTGATTTTGTTCATGATAAAGGGAAAAACTTCGAACACC 817
BSNT_02218___ 818 TTAAAACACATGGCTTTCCGACAGACAAAGTGCTGGCAGTTGGCGTTATC 867
|.|||.|.||.||.|||||.|.|||||||||.||.||.|..|||.||.|.
BL03738___met 818 TGAAAGCGCACGGTTTTCCTAAAGACAAAGTCCTTGCCGCCGGCATTTTA 867
BSNT_02218___ 868 GACGGACGCAACATTTGGAAAGCGGACCTTGAAGAGCGTCTCGA--TGCC 915
|||||||||||||||||||||||..|.||.||||||||.||||| ||.|
BL03738___met 868 GACGGACGCAACATTTGGAAAGCCAATCTCGAAGAGCGCCTCGACCTGAC 917
BSNT_02218___ 916 GTTCTTGA--TATTCTCAGCATTGCAAAAGTTGATGAACTGTGGATTCAG 963
| ||||| |..|| ||| |..||....|||||.|||.|.|||||||||
BL03738___met 918 G--CTTGAACTGATC-CAG-AGAGCGGGTGTTGACGAAGTCTGGATTCAG 963
BSNT_02218___ 964 CCTTCCAGCAGCCTGTTGCATGTTCCGGTAGCGAAACACCCTGATGAGCA 1013
|||||.|.|||||||.|.|||||.||.||.||.||||||||.|..||.||
BL03738___met 964 CCTTCAAACAGCCTGCTTCATGTCCCTGTCGCAAAACACCCGGGCGAACA 1013
BSNT_02218___ 1014 TTTGGAAAAAGACCTATTGAACGGATTATCCTACGCAAAAGAGAAGCTGG 1063
|.|.|...|.||.||.||||||||.|||||.|.||||||||||||.||..
BL03738___met 1014 TCTTGCCGACGATCTCTTGAACGGTTTATCTTTCGCAAAAGAGAAACTTC 1063
BSNT_02218___ 1064 CCGAGCTGACA--GCTTTGAAAGAA-GGTTTAGTATCAGGAAAAGCGGCG 1110
..|||||.||| ||| .||||| ||..|.||.||.|||||||||||.
BL03738___met 1064 TGGAGCTTACACTGCT---GAAGAACGGACTTGTTTCCGGAAAAGCGGCC 1110
BSNT_02218___ 1111 ATC--AGCG--AAGAGATTCAGCAGGCTAAGGCTGATA--TCCAGGCGCT 1154
||| |||| ||..|||..||| || .|.||.| |.||.|..||
BL03738___met 1111 ATCCAAGCGGAAATCGATGAAGC--GC----ACGGACACCTTCAAGATCT 1154
BSNT_02218___ 1155 TAAACAGT---TTGCAACAGGCG-CCAATTC------TGAACAAAAGAAA 1194
.||||||| .|||| ||| |.||||| || |..||||||
BL03738___met 1155 CAAACAGTACGGTGCA----GCGACAAATTCGGCCTTTG--CCGAAGAAA 1198
BSNT_02218___ 1195 GAGCTTGAGCAA-TTAACTGATAAAGACTTCAAGCGTCCGATTCCGTTTG 1243
||| |||| .|.|||||..|||||||.||.||.||||...|.||||
BL03738___met 1199 GAG-----GCAAGCTGACTGAGGAAGACTTTAAACGCCCGACAGCTTTTG 1243
BSNT_02218___ 1244 AAGAACGTTTAGCCCTG------CAAAATGAATCTCTCGGCCTTCCGCTT 1287
|||||.| .||| ||||||||.||||||||.|||||.||.
BL03738___met 1244 AAGAAAG------GCTGCGGATTCAAAATGACTCTCTCGGACTTCCCCTA 1287
BSNT_02218___ 1288 TTGCCGACGACAACGATCGGCAGCTTCCCGCAGTCTGCTGAAGTGCGGAG 1337
||||||||.||||||||||||||||||||||||.|.||.||.||||||||
BL03738___met 1288 TTGCCGACAACAACGATCGGCAGCTTCCCGCAGACGGCGGATGTGCGGAG 1337
BSNT_02218___ 1338 CGCACGCCAAAAATGGCGGAAAGCTGAGTGGTCCGATGAACAGTATCAAA 1387
|||.||.|||||||||||||||...||.||||||||.||.||||||.||.
BL03738___met 1338 CGCGCGGCAAAAATGGCGGAAAAAAGAATGGTCCGACGAGCAGTATGAAG 1387
BSNT_02218___ 1388 ACTTTATCAATGCGGAAACAAAAAGATGGATTGATATTCAGGAAGA-ATT 1436
..|||||..|.|..||||||||.|.||||||||||||||||||||| .|.
BL03738___met 1388 CATTTATTCAGGAAGAAACAAAGAAATGGATTGATATTCAGGAAGATCTC 1437
BSNT_02218___ 1437 GGAGCTTGATGTCCTTGTTCACGGCGAATTTGAACGGACAGACATGGTCG 1486
||| |||||.||.||.||||||||.|||||.|||||||||||||||||.|
BL03738___met 1438 GGA-CTTGACGTTCTCGTTCACGGAGAATTCGAACGGACAGACATGGTTG 1486
BSNT_02218___ 1487 AATACTTCGGTGAAAAGCTGGCCGGTTTCGCCTTCACTAAATATGCCTGG 1536
|.||.|||||.||||||||.|..||.||||||||.||||||||.||||||
BL03738___met 1487 AGTATTTCGGCGAAAAGCTCGGAGGATTCGCCTTTACTAAATACGCCTGG 1536
BSNT_02218___ 1537 GTTCAATCATACGGCTCACGCTGTGTCCGCCCGCCAGTCATTTACGGAGA 1586
|||||.||||||||.||.|||||.|||||.|||||.|||||.||||||||
BL03738___met 1537 GTTCAGTCATACGGTTCCCGCTGCGTCCGGCCGCCGGTCATCTACGGAGA 1586
BSNT_02218___ 1587 TGTTGAATTTATTGAACCGATGACAGTGAAAGACACAGTCTACGCACAGT 1636
|||.||.||||..||.||||||||.||.|||||.||.||.|||||.||.|
BL03738___met 1587 TGTCGAGTTTAAAGAGCCGATGACGGTAAAAGAAACGGTTTACGCCCAAT 1636
BSNT_02218___ 1637 CATTGACTTCCAAGCATGTGAAAGGAATGCTGACGGGCCCGGTTACAATC 1686
|.|||||.||.|||.|.||.||.||.||||||||.||.||.|||||.||.
BL03738___met 1637 CCTTGACCTCGAAGAAAGTCAAGGGCATGCTGACAGGGCCTGTTACCATT 1686
BSNT_02218___ 1687 TTAAACTGGT-CTTTCCCTCGAAACGACATCTCGAGGAAAGAAATCGCCT 1735
|||||||||| ||||.|| ||..|.|||.|..||||.|||||.|||||||
BL03738___met 1687 TTAAACTGGTCCTTTGCC-CGCTATGACCTGCCGAGAAAAGAGATCGCCT 1735
BSNT_02218___ 1736 TCCAAATCGGGCTT--GCCCTTCGCAAAGAAGTTAAAGCGCTTGAAGACG 1783
|||||||| ||.| |||||.||||||||.|||.|||||||||||.|.|
BL03738___met 1736 TCCAAATC--GCCTGCGCCCTCCGCAAAGAGGTTGAAGCGCTTGAAAAAG 1783
BSNT_02218___ 1784 CAGGCATTCAAATCATTCAAGTCGATGAACCAGCGCTGCGTGAAGGCCTT 1833
||||.||||||||||||||.|||||||||||.||..||.|.||||||||.
BL03738___met 1784 CAGGAATTCAAATCATTCAGGTCGATGAACCTGCCTTGAGAGAAGGCCTG 1833
BSNT_02218___ 1834 CCATTGAAAACCCGCGATTGGGATGAGTATTTGACTTGGGCGGCAGAAGC 1883
||..|.|||...||.||||||||.||||||.|.|..|||||.||||||||
BL03738___met 1834 CCGCTTAAAGAACGGGATTGGGACGAGTATCTCAAATGGGCTGCAGAAGC 1883
BSNT_02218___ 1884 TTTCAGATTAACCACTTCTTCCGTGAAAAACGAGACACAAATTCATACAC 1933
.||||||.|..|||||||.||.|||.||.|...|||.|||||.|||||.|
BL03738___met 1884 GTTCAGACTGTCCACTTCATCTGTGGAAGATACGACGCAAATCCATACGC 1933
BSNT_02218___ 1934 ATATGTGCTACAGCAACTTCGAAGATATCGTTGATACAATCAATGATCTT 1983
|||||||||||||||||||.|||||||||||.||..|.|||.|.||||||
BL03738___met 1934 ATATGTGCTACAGCAACTTTGAAGATATCGTAGACGCGATCGAAGATCTT 1983
BSNT_02218___ 1984 GATGCCGATGTGATTACAATCGAACATAGCAGAAGCCACGGAGGATTTTT 2033
||.||.||.||.|||||.|||||.||.||||||||||||||.||||||.|
BL03738___met 1984 GACGCAGACGTCATTACGATCGAGCACAGCAGAAGCCACGGCGGATTTCT 2033
BSNT_02218___ 2034 AGATTACTTAAAAAACCACCCGTATTTGAAAGGGCTTGGCCTTGGTGTAT 2083
.|||||..|..||.|.|||||.||..|||||||||||||.|||||.||||
BL03738___met 2034 TGATTATCTGGAACAGCACCCTTACCTGAAAGGGCTTGGTCTTGGCGTAT 2083
BSNT_02218___ 2084 ATGACATTCACAGCCCTCGTGTGCCGTCAACTGAAGAAATGTACAATATT 2133
||||.||||||||||||||.||.||.||.|..||.||||||..||..||.
BL03738___met 2084 ATGATATTCACAGCCCTCGCGTCCCTTCCAGCGATGAAATGCTCACGATC 2133
BSNT_02218___ 2134 ATCGTTGATGCGCTTGCCGTCTGTCCGACTGACCGCTTCTGGGTAAATCC 2183
||.|..||.|||||....|||||.|||.||||.||||||||||||||.||
BL03738___met 2134 ATAGAAGACGCGCTGAAAGTCTGCCCGGCTGATCGCTTCTGGGTAAACCC 2183
BSNT_02218___ 2184 GGACTGCGGATTGAAAACAAGACAGCAGGAAGAAACGGTTGCAGCATTGA 2233
.||||||||.||.|||||.|||||||..||.||||||.|.|||||..|.|
BL03738___met 2184 TGACTGCGGTTTAAAAACGAGACAGCCAGAGGAAACGATCGCAGCGCTTA 2233
BSNT_02218___ 2234 AAAACATGGTTGAAGCCGCAAAACAGGCAAGA-GCAAAGCAGACACAG-C 2281
|.||.|||||||||||.||.|||||.|||||| ||||| |.|.|.||| |
BL03738___met 2234 AGAATATGGTTGAAGCAGCCAAACAAGCAAGAGGCAAA-CTGGCTCAGAC 2282
BSNT_02218___ 2282 TAGTATAA 2289
| ||.|||
BL03738___met 2283 T-GTTTAA 2289
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