Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_02216 and BL03735
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:23:43
# Commandline: needle
# -asequence dna-align/BSNT_02216___guaD.1.5803.seq
# -bsequence dna-align/BL03735___guaD.2.5803.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_02216___guaD-BL03735___guaD.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_02216___guaD-BL03735___guaD.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_02216___guaD
# 2: BL03735___guaD
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 491
# Identity: 347/491 (70.7%)
# Similarity: 347/491 (70.7%)
# Gaps: 40/491 ( 8.1%)
# Score: 1118.5
#
#
#=======================================
BSNT_02216___ 1 ATGAATCATGAAACGTTCTTAAAACGGGCTGTC-ACTCTCGCATGTGAAG 49
||||||||||||.|.||.||..|.||.||..|| || ||.|| .|||.||
BL03735___gua 1 ATGAATCATGAAGCATTTTTGCAGCGCGCCATCGAC-CTTGC-GGTGGAG 48
BSNT_02216___ 50 -GAGTG-AATGCAGGAATCGGCGGGCCTTTTGGAGCCGTTATCGTGAAAG 97
|.||| ||.|| ||.|..|||||.||||||||.||.||.||.||.||||
BL03735___gua 49 AGCGTGAAAAGC-GGCACAGGCGGACCTTTTGGCGCTGTGATAGTCAAAG 97
BSNT_02216___ 98 ACGGAGCC--ATTATTGCAGAGGGACAGAACAACGTCACAACAAGCAATG 145
||| ||| |||||.||.||||||.|.|||||.||||||||||||||||
BL03735___gua 98 ACG--GCCAAATTATCGCCGAGGGAAAAAACAATGTCACAACAAGCAATG 145
BSNT_02216___ 146 ATCCGACTGCCCACGCGGAAGTCACAGCTATTCGGAAAGCCTGTAAGGTG 195
||||.||.||.|||||||||||.||.|||||||||...||||||.|.|..
BL03735___gua 146 ATCCAACCGCGCACGCGGAAGTAACGGCTATTCGGCTCGCCTGTGAAGCA 195
BSNT_02216___ 196 CTAGGAGCATACCAGCTTGATGACTGCATTTTGTATACGAGCTGTGAACC 245
||.||.|..||.|||||..|.|||||||||.|.|||||.|||||||||||
BL03735___gua 196 CTTGGCGATTATCAGCTGAACGACTGCATTCTTTATACAAGCTGTGAACC 245
BSNT_02216___ 246 ATGCCCAATGTGCTTGGGCGCCATCTACTGGGCCCGGCCTAAAGCCGTTT 295
.|||||.||||||.||||.||||||||||||||..|.||.||.|..||||
BL03735___gua 246 GTGCCCCATGTGCCTGGGAGCCATCTACTGGGCGAGACCGAAGGAAGTTT 295
BSNT_02216___ 296 TCTATGCAGCTGAGCACACAGACGCTGCCGAA---GCCGGGTTTGATGAT 342
.||..||.|||.||||..|.|| |||||.| |||||.|||||.||.
BL03735___gua 296 ACTTCGCCGCTCAGCATTCGGA---TGCCGCATCGGCCGGTTTTGACGAC 342
BSNT_02216___ 343 TCATTCATTTATAAAGAAATTGATAAACCTGCTGAAGAAAGAACG----A 388
||.||.||||||.|||||||....|||.| |||.|..||||| |
BL03735___gua 343 TCTTTTATTTATGAAGAAATCACCAAAAC----GAAAAGCGAACGGAAAA 388
BSNT_02216___ 389 TCCCCTTTTATCAAGT-GACACT---AACAGAGCATTTATCCCCGTTTCA 434
|.||.||||||.||.| ||| || |.||.|||.|..| ||.||||.
BL03735___gua 389 TTCCTTTTTATAAAATGGAC-CTTCAAGCAAAGCTTGAA---CCTTTTCT 434
BSNT_02216___ 435 AGCATGGCGGAACTTCG-CCAATAAGAAA---GAATATTAA 471
..|||||...|| | ||.||.|.||| |||||||||
BL03735___gua 435 CACATGGGAAAA----GACCGATCAAAAAGTGGAATATTAA 471
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