Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_02212 and BL03731
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:23:43
# Commandline: needle
# -asequence dna-align/BSNT_02212___ykzA.1.5803.seq
# -bsequence dna-align/BL03731___ohrB.2.5803.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_02212___ykzA-BL03731___ohrB.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_02212___ykzA-BL03731___ohrB.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_02212___ykzA
# 2: BL03731___ohrB
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 430
# Identity: 311/430 (72.3%)
# Similarity: 311/430 (72.3%)
# Gaps: 35/430 ( 8.1%)
# Score: 1144.5
#
#
#=======================================
BSNT_02212___ 1 ATG---GCACTATTTACAGCAAAAGTAACCGCGCGAGGCGGACGGGCAGG 47
||| |||.|.||||||||||||||.||.||...|||||||.|..|.||
BL03731___ohr 1 ATGACTGCATTGTTTACAGCAAAAGTCACGGCAAAAGGCGGAAGATCCGG 50
BSNT_02212___ 48 ACATATTACATCAGATGACGGTGTTCTTGATTTTGATATTGTCATGCCAA 97
||||.|.|.||||||||||||.|||.|.||...|.|.|||||||||||||
BL03731___ohr 51 ACATGTCAAATCAGATGACGGGGTTTTGGACCATAACATTGTCATGCCAA 100
BSNT_02212___ 98 ATGCCAAAAAAGAAGGACAAACCGGCACAAATCCGGAACAGCTCTTTGCG 147
|||..|||||||||||..||.|.||.||||||||.|||||||||||||||
BL03731___ohr 101 ATGAAAAAAAAGAAGGCGAATCAGGGACAAATCCTGAACAGCTCTTTGCG 150
BSNT_02212___ 148 GCAGGGTATGCTGCATGCTTCGGCGGCGCGCTCGAACACGTAGCCAAAGA 197
||.||.||.||.||.||||||||||||||..|.|||||.||.||.|||
BL03731___ohr 151 GCGGGATACGCGGCGTGCTTCGGCGGCGCATTGGAACATGTCGCAAAA-- 198
BSNT_02212___ 198 GCAGAA---TATCGAAATTGATTCGGAGATTGAAGGGCAGGTCAGCCTCA 244
||.|| .||.||.||.|||||.|||.|.|||||.||.||.|||.|..
BL03731___ohr 199 -CAAAAAGGCATTGACATCGATTCTGAGGTCGAAGGCCATGTGAGCTTGC 247
BSNT_02212___ 245 TGAAGGATGAGAGCGACGGCGGGTTTAAAATCGGTGTCACACTAGTTGTG 294
|||||||||||||.||||||||.|||||||||||.||||..||..|.||
BL03731___ohr 248 TGAAGGATGAGAGTGACGGCGGTTTTAAAATCGGCGTCAAGCTGATCGT- 296
BSNT_02212___ 295 AACAC-------------GAAAGATTTAGATCGGGAAAAAGCACATGAGC 331
||| ||||.| ||||||||..|.||||
BL03731___ohr 297 --CACAGCAGGCGGGGTAGAAAAA----------GAAAAAGCGAAAGAGC 334
BSNT_02212___ 332 TTGTCAACGCCGCTCATGAATTCTGTCCTTACTCAAAGGCAACCAGAGGA 381
|.|||.|.|||||||||||.||.||.|||||.|||||.||.||.||||||
BL03731___ohr 335 TGGTCGAAGCCGCTCATGACTTTTGCCCTTATTCAAAAGCGACGAGAGGA 384
BSNT_02212___ 382 AATGTTGATGTAAAACTAGAATTAAAATAA 411
|||.|.||.||.||.||.|||.||||||||
BL03731___ohr 385 AATATCGACGTCAATCTTGAAGTAAAATAA 414
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